Search results for "absorption."

showing 10 items of 2682 documents

Theory of CaL2,3-edge XAS using a novel multichannel multiple-scattering method

2003

A new method for calculating X-ray absorption spectroscopy (XAS) at the L2,3 edges of Ca and transition metals is presented. It is based on the multichannel multiple-scattering theory by Natoli et al. [Phys. Rev. B, (1990), 42, 1944-1968] combined with the eigen-channel R-matrix formalism. Atomic multiplet-like effects, owing to the Coulomb interaction of photoelectrons and the 2p hole, are taken into account through a configuration interaction ansatz for the final-state wavefunction. The various multiplet states lead to a set of channels for the photoelectron wavefunction, which is calculated in multiple-scattering theory. The method is applied to Ca, an important element for biological ap…

Models MolecularNuclear and High Energy PhysicsX-ray absorption spectroscopyRadiationElectronic correlationScatteringChemistrySpectrum AnalysisX-RaysConfiguration interactionMetalloproteinsCalciumScattering theoryAtomic physicsWave functionInstrumentationMultipletAnsatzJournal of Synchrotron Radiation
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Cytochrome c in a Dry Trehalose Matrix: Structural and Dynamical Effects Probed by X-Ray Absorption Spectroscopy

2007

AbstractWe report on the structure and dynamics of the Fe ligand cluster of reduced horse heart cytochrome c in solution, in a dried polyvinyl alcohol (PVA) film, and in two trehalose matrices characterized by different contents of residual water. The effect of the solvent/matrix environment was studied at room temperature using Fe K-edge x-ray absorption fine structure (XAFS) spectroscopy. XAFS data were analyzed by combining ab initio simulations and multi-parameter fitting in an attempt to disentangle structural from disorder parameters. Essentially the same structural and disorder parameters account adequately for the XAFS spectra measured in solution, both in the absence and in the pre…

Models MolecularProtein ConformationIronAb initioBiophysicsHemechemistry.chemical_compoundProtein structureImidazoleAnimalsHistidineHorsesSpectroscopyX-ray absorption spectroscopyMyocardiumSpectrum AnalysisX-RaysProteinsCytochromes cTrehaloseTrehaloseX-ray absorption fine structureSolutionsCrystallographychemistryPolyvinyl AlcoholAbsorption (chemistry)Biophysical Journal
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Energy transfers in monomers, dimers, and trimers of zinc(II) and palladium(II) porphyrins bridged by rigid Pt-containing conjugated organometallic s…

2009

A series of linear monomers (spacer-M(P)), dimers (M(P)-spacer-M'(P)), and trimers (M(P)-spacer-M'(P)-spacer-M(P)) of spacer/metalloporphyrin systems (M' = Zn, M = Zn, Pd, P = porphyrin, and spacer = trans-C(6)H(4)C[triple bond]CPtL(2)C[triple bond]CC(6)H(4)- (L = PEt(3))) including mixed metalloporphyrin compounds, were synthesized and characterized. The S(1) and T(1) energy transfers Pd(P)*--Zn(P) occur with rates of approximately 2 x 10(9) s(-1), S(1), and 0.15 x 10(3) (slow component) and 4.3 x 10(3) s(-1) (fast component), T(1). On the basis of a literature comparison with a related dyad, the Pt atom in the conjugated chain slows down the transfers. The excitation in the absorption ban…

Models MolecularTime FactorsOrganoplatinum CompoundsStereochemistryMetalloporphyrinsMolecular Conformationchemistry.chemical_elementZincConjugated system010402 general chemistryLigands01 natural sciences7. Clean energyAbsorptionInorganic Chemistrychemistry.chemical_compoundAtomtrimerPhysical and Theoretical ChemistryComputingMilieux_MISCELLANEOUSmetalloporphyrinenergy transfer010405 organic chemistrySpectrum AnalysiszincmonomerdimerpalladiumPorphyrin0104 chemical sciences3. Good health[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryCrystallographyMonomerchemistryAbsorption bandLuminescent Measurements[ CHIM.THEO ] Chemical Sciences/Theoretical and/or physical chemistryconjugated organometallic spacerDimerizationExcitationPalladium
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Structure, Spectroscopy, and Spectral Tuning of the Gas-Phase Retinal Chromophore: The β-Ionone "Handle" and Alkyl Group Effect

2005

The low-lying singlet states (i.e. S0, S1, and S2) of the chromophore of rhodopsin, the protonated Schiff base of 11-cis-retinal (PSB11), and of its all-trans photoproduct have been studied in isolated conditions by using ab initio multiconfigurational second-order perturbation theory. The computed spectroscopic features include the vertical excitation, the band origin, and the fluorescence maximum of both isomers. On the basis of the S0-->S1 vertical excitation, the gas-phase absorption maximum of PSB11 is predicted to be 545 nm (2.28 eV). Thus, the predicted absorption maximum appears to be closer to that of the rhodopsin pigment (2.48 eV) and considerably red-shifted with respect to that…

Models Molecularchemistry.chemical_classificationAlkylationDouble bondChemistrySpectrum AnalysisMolecular ConformationAb initioHydrogen BondingStereoisomerismChromophoreHydroxylationRing (chemistry)PhotochemistryVibrationRetinaGasesSinglet statePhysical and Theoretical ChemistryNorisoprenoidsSpectroscopyAbsorption (electromagnetic radiation)Alkyl
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Theoretical Insight into the Spectroscopy and Photochemistry of Isoalloxazine, the Flavin Core Ring

2006

The electronic singlet-singlet and singlet-triplet electronic transitions of the isoalloxazine ring of the flavin core are studied using second-order perturbation theory within the framework of the CASPT2//CASSCF protocol. The main features of the absorption spectrum are computed at 3.09, 4.28, 4.69, 5.00, and 5.37 eV. The lowest singlet (S1) and triplet (T1) excited states are found to be both of pi character with a singlet-triplet splitting of 0.57 eV. On the basis of the analysis of the computed spin-orbit couplings and the potential energy hypersurfaces built for the relevant excited states, the intrinsic mechanism for photoinduced population of T1 is discussed. Upon light absorption, e…

Models Moleculareducation.field_of_studyMolecular StructureAbsorption spectroscopyPhotochemistryChemistrySpectrum AnalysisPopulationFlavin groupConical intersectionPhotochemistryFlavinsExcited stateSinglet fissionSinglet statePhysical and Theoretical ChemistryTriplet stateAtomic physicseducationThe Journal of Physical Chemistry A
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Effect of moisture on elastic and viscoelastic properties of fiber reinforced plastics: Retrospective and current trends

2019

Abstract This chapter is a brief review of journal papers and books about moisture and composites with polymer matrix (mostly fiber reinforced composites but not exclusively). Most polymer materials and composites absorb moisture. It is well known from many papers (some of them mentioned in this chapter) over several decades that absorbed moisture essentially affects mechanical and many other important properties of polymers and polymer-based composites. The key question is: How does absorbed moisture affect mechanical properties of composites? Furthermore, the process of moisture absorption in composite structures may occur over many months and even years. More questions then arise: What i…

Moisture absorptionMaterials scienceMoisturePolymer scienceComposite numberNew materialsFiberFiber-reinforced compositeCurrent (fluid)Viscoelasticity
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[99mTc]Ca-Phytate: Some colloidal characteristics related to the optimal preparation conditions

1983

Abstract Some physico-chemical characteristics of the colloidal radiopharmaceutical [ 99 m Tc]Ca-phytate related to optimal preparation conditions have been studied. (1,2) It is demonstrated that the Ca 2+ -phytate stoichiometry is 6:1. Two different Ca-phytate colloids seem to be formed, mainly depending on the Ca 2+ :phytate molar ratio-one of low mycelar size for a 1:1 Ca 2+ :phytate molar ratio ( cmc ∗ = 5.10 −5 M ) , and another one, with a higher mycelar size for a 6:1 molar ratio (cmc = 8.10 −5 M). This last one it probably better for providing a good quality splenic uptake.

MolarRadiationPhytic AcidConductometryChemistryCyclitolInorganic chemistryTechnetiumOrganotechnetium CompoundsMicellelaw.inventionColloidchemistry.chemical_compoundLiverNuclear Energy and EngineeringlawMolar ratioHumansRadiology Nuclear Medicine and imagingColloidsRadionuclide ImagingAtomic absorption spectroscopyMononuclear Phagocyte SystemSpleenStoichiometryThe International Journal of Applied Radiation and Isotopes
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Electronic excited states of conjugated cyclic ketones and thioketones : A theoretical study

2002

Absorption spectra of a series of cyclic conjugated ketones and thioketones have been computed at the multiconfigurational second-order multistate perturbation level of theory, the CASSCF/MS-CASPT2 method. Excitation energies, transition dipole moments, oscillator strengths, and static dipole moments are reported and discussed for excited states with energies lower than ≈ 7–8 eV. The main bands of the spectra have been assigned and characterized in most cases for the first time. The spectroscopy of the different systems is compared in detail. Thioketones in particular have low-energy and intense ππ∗ transitions which suggest corresponding enhanced nonlinear molecular optical properties. Add…

Molecular MomentsAbsorption spectroscopyChemistryOrganic CompoundsTransition MomentsGeneral Physics and AstronomyOscillator StrengthsExcited StatesConjugated systemSCF CalculationsSpectral lineUNESCO::FÍSICA::Química físicaDipoleExcited stateTheoretical chemistryPhysical and Theoretical ChemistryAtomic physicsOrganic Compounds ; Excited States ; SCF Calculations ; Molecular Moments ; Oscillator Strengths ; Transition MomentsSpectroscopy:FÍSICA::Química física [UNESCO]Excitation
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Quantum Chemical Parametrization and Spectroscopic Characterization of the Frenkel Exciton Hamiltonian for a J-Aggregate Forming Perylene Bisimide Dye

2012

Quantum chemical and quantum dynamical calculations are performed for a bay-substituted perylene bisimide dye up to its hexameric aggregate. The aggregate structure is determined by employing the self-consistent charge density functional tight-binding (SCC-DFTB) approach including dispersion corrections. It is characterized by a stabilization via two chains of hydrogen bonds facilitated by amide functionalities. Focusing on the central embedded dimer, the Coulomb coupling for this J-aggregate is determined by means of the time-dependent density functional theory (TDDFT) to be -514 cm(-1). Exciton vibrational coupling is treated within the shifted oscillator model from which five strongly co…

Molecular StructureAbsorption spectroscopyChemistryExcitonCharge densityTime-dependent density functional theoryImideschemistry.chemical_compoundQuantum TheoryDensity functional theoryPhysical and Theoretical ChemistryAtomic physicsRotational–vibrational couplingPeryleneJ-aggregatePeryleneFluorescent DyesThe Journal of Physical Chemistry A
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Predicting Skin Permeability by Means of Computational Approaches: Reliability and Caveats in Pharmaceutical Studies

2019

The skin is the main barrier between the internal body environment and the external one. The characteristics of this barrier and its properties are able to modify and affect drug delivery and chemical toxicity parameters. Therefore, it is not surprising that permeability of many different compounds has been measured through several in vitro and in vivo techniques. Moreover, many different in silico approaches have been used to identify the correlation between the structure of the permeants and their permeability, to reproduce the skin behavior, and to predict the ability of specific chemicals to permeate this barrier. A significant number of issues, like interlaboratory variability, experim…

Molecular dynamicComputer scienceGeneral Chemical EngineeringSkin AbsorptionSkin permeabilityLibrary and Information SciencesPrinciple component regressionPartial least square01 natural sciencesModels BiologicalQuantitative structure-property relationship0103 physical sciencesDrug DiscoveryAnimalsHumansComputer SimulationSite of originSkinIn silico prediction010304 chemical physicsChemical toxicityGeneral ChemistrySettore CHIM/08 - Chimica Farmaceutica0104 chemical sciencesComputer Science ApplicationsMultilinear regression010404 medicinal & biomolecular chemistryPharmaceutical PreparationsDrug deliverySkin permeabilityBiochemical engineeringAlgorithms
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