Search results for "actin"

showing 10 items of 1375 documents

Bio-sintering processes in hexactinellid sponges: Fusion of bio-silica in giant basal spicules from Monorhaphis chuni☆

2009

The two sponge classes, Hexactinellida and Demospongiae, comprise a skeleton that is composed of siliceous skeletal elements (spicules). Spicule growth proceeds by appositional layering of lamellae that consist of silica nanoparticles, which are synthesized via the sponge-specific enzyme silicatein. While in demosponges during maturation the lamellae consolidate to a solid rod, the lamellar organization of hexactinellid spicules largely persists. However, the innermost lamellae, near the spicule core, can also fuse to a solid axial cylinder. Similar to the fusion of siliceous nanoparticles and lamella, in several hexactinellid species individual spicules unify during sintering-like processe…

FusionSpiculebiologyHexactinellidMolecular Sequence DataAnimal StructuresAnatomyBlotting NorthernSilicon Dioxidebiology.organism_classificationPoriferaSpongeLamella (surface anatomy)Sponge spiculeStructural BiologySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationComplementary DNAMicroscopy Electron ScanningBiophysicsAnimalsLamellar structureJournal of Structural Biology
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The Cell Cycle-Specific Growth-Inhibitory Factor Produced by Actinobacillus actinomycetemcomitans Is a Cytolethal Distending Toxin

1998

ABSTRACT Actinobacillus actinomycetemcomitans has been shown to produce a soluble cytotoxic factor(s) distinct from leukotoxin. We have identified in A. actinomycetemcomitans Y4 a cluster of genes encoding a cytolethal distending toxin (CDT). This new member of the CDT family is similar to the CDT produced by Haemophilus ducreyi . The CDT from A. actinomycetemcomitans was produced in Escherichia coli and was able to induce cell distension, growth arrest in G 2 /M phase, nucleus swelling, and chromatin fragmentation in HeLa cells. The three proteins, CDTA, -B and -C, encoded by the cdt locus were all required for toxin activity. Antiserum raised against recombinant CDTC completely inhibited …

G2 PhaseCytolethal distending toxin[SDV]Life Sciences [q-bio]Bacterial ToxinsMolecular Sequence DataRestriction MappingImmunologyMitosismedicine.disease_causeAggregatibacter actinomycetemcomitansMicrobiologyVirulence factorMicrobiologyEscherichia colimedicineHumansAmino Acid SequenceCloning MolecularEscherichia coliBase SequencebiologyToxinACTIVITEAggregatibacter actinomycetemcomitansGENETIQUECell cyclebiology.organism_classificationGrowth InhibitorsRecombinant Proteins[SDV] Life Sciences [q-bio]Infectious DiseasesGenes BacterialMultigene FamilyActinobacillusMolecular and Cellular PathogenesisParasitologyHaemophilus ducreyiHeLa CellsInfection and Immunity
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Phosphate-controlled regulator for the biosynthesis of the dalbavancin precursor A40926

2007

ABSTRACT The actinomycete Nonomuraea sp. strain ATCC 39727 produces the glycopeptide A40926, the precursor of the novel antibiotic dalbavancin. Previous studies have shown that phosphate limitation results in enhanced A40926 production. The A40926 biosynthetic gene ( dbv ) cluster, which consists of 37 genes, encodes two putative regulators, Dbv3 and Dbv4, as well as the response regulator (Dbv6) and the sensor-kinase (Dbv22) of a putative two-component system. Reverse transcription-PCR (RT-PCR) and real-time RT-PCR analysis revealed that the dbv14 - dbv8 and the dbv30 - dbv35 operons, as well as dbv4 , were negatively influenced by phosphate. Dbv4 shows a putative helix-turn-helix DNA-bind…

GENE-CLUSTERTranscription GeneticOperonSP ATCC-39727MicrobiologyPhosphatesPROMOTERSchemistry.chemical_compoundBiosynthesisSTRRGene clusterSTREPTOMYCES-GRISEUSGene RegulationTRANSCRIPTIONPhosphate-Controlled RegulatorPromoter Regions GeneticMolecular BiologyGeneAntibacterial agentbiologyIDENTIFICATIONGene Expression Regulation Bacterialbiology.organism_classificationGLYCOPEPTIDE ANTIBIOTIC A40926GlycopeptideAnti-Bacterial AgentsActinobacteriaResponse regulatorchemistryBiochemistryMultigene FamilyDNA-BINDING PROTEINPHOR-PHOP SYSTEMTeicoplaninStreptomyces griseus
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New perspectives on the renal slit diaphragm protein podocin.

2011

Podocin is a critical component of the glomerular filtration barrier, its mutations causing recessive steroid-resistant nephrotic syndrome. A GenBank analysis of the human podocin (NPHS2) gene resulted in the possible existence of a new splice variant of podocin in the kidney, missing the in-frame of exon 5, encoding the prohibitin homology domain. Using RT–polymerase chain reaction and immunoblotting followed by sequence analysis, we are for the first time able to prove the expression of a novel podocin isoform (isoform 2), exclusively and constitutively expressed in human podocytes. Furthermore, we reveal singular extrarenal podocin expression in human and murine testis. Our data show the…

Gene isoformAdultMalePathologymedicine.medical_specialtyendocrine systemkidneySertoli cellsBlotting WesternImmunoblottingMolecular Sequence Datatestisurologic and male genital diseasesReal-Time Polymerase Chain ReactionFilamentous actinPathology and Forensic MedicineSertoli cell-only syndromeMiceYoung AdultmedicineAnimalsHumansProtein IsoformsSertoli cell-only syndromeAmino Acid SequenceProhibitinAgedKidneyMicroscopy ConfocalbiologyBase Sequenceurogenital systemPodocytesGene Expression ProfilingIntracellular Signaling Peptides and ProteinsMembrane ProteinsisoformMiddle Agedmedicine.diseaseSertoli cellfemale genital diseases and pregnancy complicationsWT-1medicine.anatomical_structureSlit diaphragmPodocinbiology.proteinOriginal ArticlepodocinModern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc
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Muscleblind isoforms are functionally distinct and regulate α-actinin splicing

2007

Drosophila Muscleblind (Mbl) proteins control terminal muscle and neural differentiation, but their molecular function has not been experimentally addressed. Such an analysis is relevant as the human Muscleblind-like homologs (MBNL1-3) are implicated in the pathogenesis of the inherited muscular developmental and degenerative disease myotonic dystrophy. The Drosophila muscleblind gene expresses four protein coding splice forms (mblA to mblD) that are differentially expressed during the Drosophila life cycle, and which vary markedly in their ability to rescue the embryonic lethal phenotype of muscleblind mutant flies. Analysis of muscleblind mutant embryos reveals misregulated alternative sp…

Gene isoformCancer ResearchMolecular Sequence DataBiologyKidneyChlorocebus aethiopsAnimalsDrosophila ProteinsHumansProtein IsoformsActininMuscle Skeletal3' Untranslated RegionsMolecular BiologyGeneCells CulturedCell NucleusGeneticsBase SequenceAlternative splicingGene Expression Regulation DevelopmentalNuclear ProteinsRNA-Binding ProteinsRNAKidney metabolismCell BiologyAlternative SplicingDrosophila melanogasterCOS CellsMutationRNA splicingTrinucleotide Repeat ExpansionTrinucleotide repeat expansionDevelopmental BiologyMinigeneDifferentiation
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Quantitative RT-PCR measurement of human cytochrome P-450s: application to drug induction studies.

2000

A quantitative RT-PCR assay has been developed that is able to measure the mRNA content of the major human CYPs (1A1, 1A2, 2A6, 2B6, 2C9, 2C19, 2D6, 2E1, 3A4, and 3A5). The technique is highly specific, reproducible, rapid, and sensitive enough to quantitate low and high abundant mRNAs. The PCR primers were selected to specifically match each CYP mRNA, to have a very close annealing temperature, and to render PCR products of similar sizes. The PCR conditions were designed to allow the simultaneous measurement of the various human liver CYPs in a single run. To achieve precise and reproducible quantitation of each cytochrome mRNA, a external standard (luciferase mRNA) is added to the probes …

Gene isoformCytochromeBiophysicsBiochemistrySensitivity and Specificitychemistry.chemical_compoundCytochrome P-450 Enzyme SystemComplementary DNAHumansLuciferaseRNA MessengerMolecular BiologyCells CulturedDNA PrimersMessenger RNAbiologyBase SequenceReverse Transcriptase Polymerase Chain ReactionCYP1A2Molecular biologyActinsReal-time polymerase chain reactionchemistryLiverEvaluation Studies as TopicEnzyme Inductionbiology.proteinXenobioticArchives of biochemistry and biophysics
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Model of a six immunoglobulin-like domain fragment of filamin A (16-21) built using residual dipolar couplings.

2012

Filamins are actin-binding proteins that participate in a wide range of cell functions, including cell morphology, locomotion, membrane protein localization, and intracellular signaling. The three filamin isoforms found in humans, filamins A, B, and C, are highly homologous, and their roles are partly complementary. In addition to actin, filamins interact with dozens of other proteins that have roles as membrane receptors and channels, enzymes, signaling intermediates, and transcription factors. Filamins are composed of an N-terminal actin-binding domain and 24 filamin-type immunoglobulin-like domains (FLN) that form tail-to-tail dimers with their C-terminal FLN domain. Many of the filamin …

Gene isoformModels Molecularanimal structuresMagnetic Resonance SpectroscopyProtein ConformationFilaminsIntegrinBiomolecular structuremacromolecular substances010402 general chemistryFilaminCell morphologyCrystallography X-Ray01 natural sciencesBiochemistryCatalysis03 medical and health sciencesColloid and Surface ChemistryContractile ProteinsHumansTranscription factorImmunoglobulin FragmentsActin030304 developmental biologychemistry.chemical_classification0303 health sciencesbiologyChemistryMicrofilament ProteinsGeneral Chemistry0104 chemical sciencesCell biologybody regionsbiology.proteinGlycoproteinJournal of the American Chemical Society
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Expression of the gene of the alpha-smooth muscle-actin isoform in rat liver and in rat fat-storing (ITO) cells.

1990

Fat storing cells (FSCs) in the liver represent the main site of vitamin A deposition in the body. These cells are considered to play an important role during scar formation and fibrogenesis in the liver. The putative descent of FSCs from the fibroblastic or from the myofibroblastic system have not been determined yet by morphological or immunohistochemical studies. To further define the origin of these liver cells, we analysed the pattern of expression of three structural proteins: vimentin, desmin and the α-smooth muscle (SM)-actin isoform in FSCs of the rat liver, in smooth muscle cells (SMCs) from the aorta and in rat skin fibroblasts. FSCs were studied by immunohistochemical methods im…

Gene isoformPathologymedicine.medical_specialtyFluorescent Antibody TechniqueGene ExpressionVimentinmacromolecular substancesBiologyDesminImmunoenzyme TechniquesNecrosisGene expressionmedicineAnimalsVimentinNorthern blotActinAortaCells CulturedImmunoperoxidaseNucleic Acid HybridizationMuscle SmoothRats Inbred StrainsGeneral MedicineFibroblastsLipid MetabolismMolecular biologyActinsRatsLiverHepatic stellate cellbiology.proteinRNADesminFemaleVirchows Archiv. B, Cell pathology including molecular pathology
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β1-Integrin Cytoplasmic Subdomains Involved in Dominant Negative Function

1998

The beta1-integrin cytoplasmic domain consists of a membrane proximal subdomain common to the four known isoforms ("common" region) and a distal subdomain specific for each isoform ("variable" region). To investigate in detail the role of these subdomains in integrin-dependent cellular functions, we used beta1A and beta1B isoforms as well as four mutants lacking the entire cytoplasmic domain (beta1TR), the variable region (beta1COM), or the common region (beta1 deltaCOM-B and beta1 deltaCOM-A). By expressing these constructs in Chinese hamster ovary and beta1 integrin-deficient GD25 cells (Wennerberg et al., J Cell Biol 132, 227-238, 1996), we show that beta1B, beta1COM, beta1 deltaCOM-B, a…

Gene isoformTalinCytoplasmProtein ConformationIntegrinMolecular Sequence DataCHO CellsIntegrin alpha5Platelet Membrane GlycoproteinsArticleFocal adhesionchemistry.chemical_compoundMiceAntigens CDCricetinaeCell AdhesionAnimalsActininAmino Acid SequencePhosphorylationCell adhesionMolecular BiologyBinding SitesbiologyCell adhesion moleculeChinese hamster ovary cellIntegrin beta1Integrin beta3Tyrosine phosphorylationCell BiologyIntegrin alphaVProtein-Tyrosine KinasesRecombinant ProteinsCell biologyFibronectinsFibronectinchemistryFocal Adhesion Kinase 1Focal Adhesion Protein-Tyrosine KinasesMutationbiology.proteinCell Adhesion MoleculesSignal Transduction
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Proper synaptic vesicle formation and neuronal network activity critically rely on syndapin I

2011

Synaptic transmission relies on effective and accurate compensatory endocytosis. F-BAR proteins may serve as membrane curvature sensors and/or inducers and thereby support membrane remodelling processes; yet, their in vivo functions urgently await disclosure. We demonstrate that the F-BAR protein syndapin I is crucial for proper brain function. Syndapin I knockout (KO) mice suffer from seizures, a phenotype consistent with excessive hippocampal network activity. Loss of syndapin I causes defects in presynaptic membrane trafficking processes, which are especially evident under high-capacity retrieval conditions, accumulation of endocytic intermediates, loss of synaptic vesicle (SV) size cont…

General Immunology and MicrobiologyGeneral NeuroscienceEndocytic cycleBiologyNeurotransmissionEndocytosisActin cytoskeletonSynaptic vesicleGeneral Biochemistry Genetics and Molecular BiologyBulk endocytosisCell biologyMolecular BiologyDynaminMembrane invaginationThe EMBO Journal
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