Search results for "africa"

showing 10 items of 962 documents

Opposite trends in the genus Monsonia (Geraniaceae): Specialization in the African deserts and range expansions throughout eastern Africa

2017

The African Austroerate Flora stands out by its important species richness. A distinctive element of this flora is Monsonia (Geraniaceae), mostly found in the Namib-Karoo but also in the Natal-Drakensberg, the Somalian Zambezian and the Saharo-Arabian regions. Here, we reconstruct the evolution and biogeographic history of Monsonia based on nuclear and plastid markers, and examine the role of morphological and niche evolution in its diversification using species distribution modeling and macroevolutionary models. Our results indicate that Monsonia first diversified in the Early Miocene c.21 Ma, coinciding with the start of desertification in southwestern Africa. An important diversification…

0106 biological sciences0301 basic medicineFloraRange (biology)Species distributionBiomelcsh:MedicineBiology010603 evolutionary biology01 natural sciencesArticle03 medical and health sciencesGenusPhotosynthesislcsh:ScienceEcosystemGeraniaceaePhylogenyMultidisciplinaryGeographyEcologylcsh:RBiodiversity030104 developmental biologyTaxonHabitatAfricalcsh:QSpecies richnessDesert ClimateEnergy Metabolism
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A hierarchical Bayesian Beta regression approach to study the effects of geographical genetic structure and spatial autocorrelation on species distri…

2019

Global climate change (GCC) may be causing distribution range shifts in many organisms worldwide. Multiple efforts are currently focused on the development of models to better predict distribution range shifts due to GCC. We addressed this issue by including intraspecific genetic structure and spatial autocorrelation (SAC) of data in distribution range models. Both factors reflect the joint effect of ecoevolutionary processes on the geographical heterogeneity of populations. We used a collection of 301 georeferenced accessions of the annual plant Arabidopsis thaliana in its Iberian Peninsula range, where the species shows strong geographical genetic structure. We developed spatial and nonsp…

0106 biological sciences0301 basic medicineHierarchical Bayesian modelsArabidopsis thalianaRange (biology)Bayesian probabilitySpecies distributionArabidopsisGenetic admixtureBiologyResidual010603 evolutionary biology01 natural sciences03 medical and health sciencesAfrica NorthernStatisticsGeneticsSpatial analysisEcology Evolution Behavior and SystematicsSpatial AnalysisPortugalPlant DispersalGenetic heterogeneityGlobal climate changePhylogeographyGenetics Population030104 developmental biologySpainGenetic structureGeographic genetic structureMaxentPeptidesSpatial autocorrelationBiotechnology
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The long journey of Orthotrichum shevockii (Orthotrichaceae, Bryopsida): From California to Macaronesia

2019

Biogeography, systematics and taxonomy are complementary scientific disciplines. To understand a species' origin, migration routes, distribution and evolutionary history, it is first necessary to establish its taxonomic boundaries. Here, we use an integrative approach that takes advantage of complementary disciplines to resolve an intriguing scientific question. Populations of an unknown moss found in the Canary Islands (Tenerife Island) resembled two different Californian endemic species: Orthotrichum shevockii and O. kellmanii. To determine whether this moss belongs to either of these species and, if so, to explain its presence on this distant oceanic island, we combined the evaluation of…

0106 biological sciences0301 basic medicineLeavesPlant ScienceBryology01 natural sciencesGeographical locationsCaliforniaNonvascular PlantsPhylogenyData ManagementMultidisciplinaryPhylogenetic analysisbiologyPlant AnatomyQREukaryotaPhylogenetic AnalysisPlantsClassification3. Good healthPhylogeneticsPhylogeographyGeographyMedicineTaxonomy (biology)Research ArticleSystematicsComputer and Information SciencesScienceBiogeographyCanary Islands010603 evolutionary biologyEvolution Molecular03 medical and health sciencesOrthotrichumMossesEvolutionary SystematicsNonvascular plantsOrthotrichaceaeEndemismTaxonomyEvolutionary BiologyBotánicaOrganismsBiology and Life SciencesSequence Analysis DNA15. Life on landbiology.organism_classificationBryopsidaUnited States030104 developmental biologyTaxonSpainEvolutionary biologyAfricaNorth AmericaBiological dispersalPeople and places
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Origin and distribution of desert ants across the Gibraltar Straits

2017

The creation of geographic barriers has long been suspected to contribute to the formation of new species. We investigated the phylogeography of desert ants in the western Mediterranean basin in order to elucidate their mode of diversification. These insects which have a low dispersal capacity are recently becoming important model systems in evolutionary studies. We conducted an extensive sampling of species belonging to the Cataglyphis albicans group in the Iberian Peninsula (IP) and the northern Morocco (North Africa; NA). We then combined genetic, chemical and morphological analyses. The results suggest the existence of at least three and five clades in the IP and NA, respectively, whose…

0106 biological sciences0301 basic medicineMaleParapatric speciation01 natural sciencesMediterranean BasinMonophylyfylogeografiaAfrica NorthernmuurahaisetPhylogenyComputingMilieux_MISCELLANEOUS[SDV.EE]Life Sciences [q-bio]/Ecology environmentLikelihood FunctionsPrincipal Component AnalysisbiologyEcologyCataglyphisDiscriminant Analysisgenital traitsBiological EvolutionEuropeMoroccoPhylogeographyAllopatric speciation010603 evolutionary biologythermophilyModels Biological03 medical and health sciencesGeneticsAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsDemographyGibraltarAntscuticular hydrocarbonsGenetic VariationBayes Theorem15. Life on landbiology.organism_classificationHydrocarbonsEnvironmental niche modellingPhylogeography030104 developmental biologyCataglyphisglaciationsBiological dispersalta1181Microsatellite Repeats[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Molecular Analysis of the Official Algerian Olive Collection Highlighted a Hotspot of Biodiversity in the Central Mediterranean Basin

2020

Genetic diversity and population structure studies of local olive germplasm are important to safeguard biodiversity, for genetic resources management and to improve the knowledge on the distribution and evolution patterns of this species. In the present study Algerian olive germplasm was characterized using 16 nuclear (nuSSR) and six chloroplast (cpSSR) microsatellites. Algerian varieties, collected from the National Olive Germplasm Repository (ITAFV), 10 of which had never been genotyped before, were analyzed. Our results highlighted the presence of an exclusive genetic core represented by 13 cultivars located in a mountainous area in the North-East of Algeria, named Little Kabylie. Compar…

0106 biological sciences0301 basic medicineMediterranean climateGermplasmChloroplastslcsh:QH426-470BiodiversityGenetic relationship01 natural sciencesMediterranean BasinArticle<i>olea europaea</i> l.olivenuSSR03 medical and health sciencesAfrica NorthernOleaGeneticsHumansDomesticationPhylogenyGenetics (clinical)Genetic diversityOlea europaea L.GreeceMediterranean RegionEcologyfungiGenetic Variationfood and beveragescpSSRpopulation structuregenetic diversityMoroccolcsh:Genetics030104 developmental biologyGeographyItalyCrop wild relativeSpainAlgeriaMediterranean Region Olea europaea L cpSSR genetic diversity nuSSR olive population structureMicrosatellite Repeats010606 plant biology & botanyGenes
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Do mosses really exhibit so large distribution ranges? Insights from the integrative taxonomic study of the Lewinskya affinis complex (Orthotrichacea…

2019

The strikingly lower number of bryophyte species, and in particular of endemic species, and their larger distribution ranges in comparison with angiosperms, have traditionally been interpreted in terms of their low diversification rates associated with a high long-distance dispersal capacity. This hypothesis is tested here with Lewinskya affinis (≡ Orthotrichum affine), a moss species widely spread across Europe, North and East Africa, southwestern Asia, and western North America. We tested competing taxonomic hypotheses derived from separate and combined analyses of multilocus sequence data, morphological characters, and geographical distributions. The best hypothesis, selected by a Bayes …

0106 biological sciences0301 basic medicineOld WorldRange (biology)ZoologyBryophytaBiology010603 evolutionary biology01 natural sciencesBryopsida03 medical and health sciencesSpecies SpecificityGeneticsOrthotrichaceaeEndemismMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsGeographyOrthotricheaeDiscriminant AnalysisReproducibility of ResultsBayes TheoremAfrica Eastern15. Life on landbiology.organism_classificationMossBryopsidaEurope030104 developmental biologyLong-distance dispersalDiversificationNorth AmericaBiological dispersalBryophyteMolecular Phylogenetics and Evolution
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Multiple shifts to open habitats in Melastomateae (Melastomataceae) congruent with the increase of African Neogene climatic aridity

2018

International audience; AimAfrican Melastomateae (Melastomataceae) comprise c. 185 species occurring in closed or open habitats throughout sub-Saharan Africa. We sought to reconstruct biogeographical and habitat history, and shifts in diversification rates of African Melastomateae using a well-sampled, dated molecular phylogeny.LocationAmericas, sub-Saharan Africa, Madagascar, SE Asia.TaxonAngiosperms, Melastomataceae, African Melastomateae.MethodsPhylogenetic relationships were estimated based on an extensive sampling of New and Old World Melastomateae, using two nuclear and three plastid markers. Divergence times were estimated in BEAST based on three calibration priors under Bayesian unc…

0106 biological sciences0301 basic medicineOld WorlddiversificationMelastomataceaeBiogeography[SDV]Life Sciences [q-bio]divergence timeNeogene010603 evolutionary biology01 natural sciences03 medical and health sciencesopen habitatsclosed habitats[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEcology Evolution Behavior and Systematicsbiogeographyhabitat shiftsEcologybiologyEcology15. Life on landbiology.organism_classification030104 developmental biologyGeographyTaxonHabitatMolecular phylogeneticsAfricaMelastomataceaeBiological dispersalNeogenegrassland
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Barcoding of parasitoid wasps (Braconidae and Chalcidoidea) associated with wild and cultivated olives in the Western Cape of South Africa

2019

Wild and cultivated olives harbor and share a diversity of insects, some of which are considered agricultural pests, such as the olive fruit fly. The assemblage of olive-associated parasitoids and seed wasps is rich and specialized in sub-Saharan Africa, with native species possibly coevolving with their hosts. Although historical entomological surveys reported on the diversity of olive wasp species in the Western Cape Province of South Africa, no comprehensive study has been performed in the region in the molecular era. In this study, a dual approach combining morphological and DNA-based methods was used for the identification of adult specimens reared from olive fruits. Four species of B…

0106 biological sciences0301 basic medicineOlive fruit flyWaspsParasitismmedicine.disease_cause010603 evolutionary biology01 natural sciencesDNA barcodingParasitoid03 medical and health sciencesSouth AfricaOleaBotanyInfestationGeneticsmedicineAnimalsDNA Barcoding TaxonomicMolecular BiologyPhylogenybiologyfungiGeneral MedicineBiodiversityDNAbiology.organism_classification030104 developmental biologyGenetic distanceTaxonomy (biology)BraconidaeBiotechnologyGenome
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The evolution of dwarf shrubs in alpine environments: a case study ofAlchemillain Africa

2015

BACKGROUND AND AIMS Alpine and arctic environments worldwide, including high mountains, are dominated by short-stature woody plants (dwarf shrubs). This conspicuous life form asserts considerable influence on local environmental conditions above the treeline, creating its own microhabitat. This study reconstructs the evolution of dwarf shrubs in Alchemilla in the African tropical alpine environment, where they represent one of the largest clades and are among the most common and abundant plants. METHODS Different phylogenetic inference methods were used with plastid and nuclear DNA sequence markers, molecular dating (BEAST and RelTime), analyses of diversification rate shifts (MEDUSA and BA…

0106 biological sciences0301 basic medicinePleistoceneved/biology.organism_classification_rank.speciesPlant Science010603 evolutionary biology01 natural sciencesShrub03 medical and health sciencesRosoideaeAlchemillaEcosystemPhylogenyGeographybiologyEcologyved/biologyTemperatureGenetic VariationSequence Analysis DNAOriginal Articlesbiology.organism_classificationBiological Evolution030104 developmental biologyArcticAfricaBiological dispersalAdaptationAlchemillaWoody plantAnnals of Botany
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Alu insertion polymorphisms in the African Sahel and the origin of Fulani pastoralists.

2017

The origin of Western African pastoralism, represented today by the Fulani nomads, has been a highly debated issue for the past decades, and has not yet been conclusively resolved.This study focused on Alu polymorphisms in sedentary and nomadic populations across the African Sahel to investigate patterns of diversity that can complement the existing results and contribute to resolving issues concerning the origin of West African pastoralism.A new dataset of 21 Alu biallelic markers covering a substantial part of the African Sahel has been analysed jointly with several published North African populations.Interestingly, with regard to Alu variation, the relationship of Fulani pastoralists to …

0106 biological sciences0301 basic medicineTransients and MigrantsAgingPolymorphism GeneticPhysiologyEpidemiologyPastoralismPublic Health Environmental and Occupational HealthAlu element010603 evolutionary biology01 natural sciences03 medical and health sciencesWest african030104 developmental biologyGeographyAlu ElementsGeneticsEthnologyHumansNorth africanAfrica South of the SaharaAnnals of human biology
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