Search results for "alus"
showing 10 items of 462 documents
The Greenland shark Somniosus microcephalus—Hemoglobins and ligand-binding properties
2017
A large amount of data is currently available on the adaptive mechanisms of polar bony fish hemoglobins, but structural information on those of cartilaginous species is scarce. This study presents the first characterisation of the hemoglobin system of one of the longest-living vertebrate species (392 +/- 120 years), the Arctic shark Somniosus microcephalus. Three major hemoglobins are found in its red blood cells and are made of two copies of the same a globin combined with two copies of three very similar beta subunits. The three hemoglobins show very similar oxygenation and carbonylation properties, which are unaffected by urea, a very important compound in marine elasmobranch physiology.…
Oligo-Miocene lacustrine microbial and metazoan buildups from the Limagne Basin (French Massif Central)
2018
The Limagne Basin (French Massif Central) is an extensive continental lacustrine system accommodating microbial and metazoan buildups from Chattian to Aquitanian age. A description of these buildups and their associated biotic components in Grand Gandaillat and Crechy quarries provides insights into their spatio-temporal distribution patterns. Flats, cauliflowers, domes, cones and coalescent columnar morphologies have been identified with a main laminated mesofabric and laminated, columnar, filamentous and caddisfly-coated microfabrics. Two low-gradient margin models emerged based on the changes in the distribution, morphology and size of the microbial and metazoan-rich deposits through tim…
Investigating the Local Reservoir Age and Stable Isotopes of Shells from Southeast Arabia
2016
AbstractWe recently started a systematic approach to determine the reservoir age in southeast Arabia and its dependence on mollusk species and their environment. This part of the study concentrates on local reservoir age and stable isotopes of the lagoonal species Terebralia palustris and Anadara uropigimelana at Khor Kalba, Oman Sea. Environmental and nutritive influences on mollusks are reflected in the radiocarbon and stable isotope signal. We found a local reservoir age of A. uropigimelana of about 940 yr and that of T. palustris as 800 yr. Sclerochronological analyses yielded information about seasonality of growth and death in A. uropigimelana. The modern shell of Periglypta reticulat…
Landscape and wood-fuel in Akrotiri (Thera, Greece) during the Bronze Age
2017
Abstract Wood charcoal macroremains originating from the archaeological site of Akrotiri, Thera (Greece) have been analyzed. The results obtained suggest the existence of thermophilous vegetation on the island from the Early Cycladic period right up to the catastrophic eruption of the volcano in the Late Cycladic I period. The comparative evaluation of the results gained from this study and the previous ones indicates that during the Early Cycladic period an open Pinus type brutia/halepensis (Cyprus/Aleppo pine) forest prevailed on the island, accompanied by maquis vegetation. From the Middle Cycladic period and onwards a shift towards open maquis vegetation is observed. At the same time, s…
Identification of key genes and its chromosome regions linked to drought responses in leaves across different crops through meta-analysis of RNA-Seq …
2019
Background Our study is the first to provide RNA-Seq data analysis related to transcriptomic responses towards drought across different crops. The aim was to identify and map which genes play a key role in drought response on leaves across different crops. Forty-two RNA-seq samples were analyzed from 9 published studies in 7 plant species (Arabidopsis thaliana, Solanum lycopersicum, Zea mays, Vitis vinifera, Malus X domestica, Solanum tuberosum, Triticum aestivum). Results Twenty-seven (16 up-regulated and 11 down-regulated) drought-regulated genes were commonly present in at least 7 of 9 studies, while 351 (147 up-regulated and 204 down-regulated) were commonly drought-regulated in 6 of 9 …
From the roots to the stem: unveiling pear root colonization and infection pathways by Erwinia amylovora
2020
ABSTRACT Fire blight caused by Erwinia amylovora affects pome fruit worldwide, generating serious economic losses. Despite the abundant literature on E. amylovora infection mechanisms of aerial plant organs, root infection routes remain virtually unexplored. Assessing these infection pathways is necessary for a full understanding of the pathogen's ecology. Using the pathosystem Pyrus communis–E. amylovora and different experimental approaches including a green fluorescent protein transformant (GFP1) and epifluorescence microscopy (EFM) and laser confocal scanning microscopy (LCSM), we demonstrated the pathogen's ability to infect, colonize and invade pear roots and cause characteristic fire…
Transcriptomic responses to biotic stresses in Malus x domestica: a meta-analysis study.
2017
AbstractRNA-Seq analysis is a strong tool to gain insight into the molecular responses to biotic stresses in plants. The objective of this work is to identify specific and common molecular responses between different transcriptomic data related to fungi, virus and bacteria attacks in Malus x domestica. We analyzed seven transcriptomic datasets in Malus x domestica divided in responses to fungal pathogens, virus (Apple Stem Grooving Virus) and bacteria (Erwinia amylovora). Data were dissected using an integrated approach of pathway- and gene- set enrichment analysis, Mapman visualization tool, gene ontology analysis and inferred protein-protein interaction network. Our meta-analysis revealed…
Gaining Insight into Exclusive and Common Transcriptomic Features Linked with Biotic Stress Responses in Malus
2017
Identifying key information in transcriptomic data is very important, especially when the “omic” study deals with plant responses to stresses in field conditions where a high number of variables and disturbing factors may affect the analysis. In this meta-analysis we collected 12 transcriptomic works in Malus in order to identify which key genes, proteins, gene categories are involved in general plant pathological conditions and those features linked with exclusive biotic stress responses. Those genes that are only related with molecular responses to pathogen attacks and those linked with other plant physiological processes were identified. A pipeline composed by pathway and gene set enrich…
Cannibalism facilitates gigantism in a nine-spined stickleback (Pungitius pungitius) population
2016
Cannibalism is a taxonomically widespread phenomenon that can fundamentally affect the structure and stability of aquatic communities, including the emergence of a bimodal size distribution (“dwarfs” and “giants”) in fish populations. Emergence of giants could also be driven or facilitated by parasites that divert host resources from reproduction to growth. We studied the trophic ecology of giant nine-spined sticklebacks (Pungitius pungitius) in a Finnish pond to evaluate the hypotheses that gigantism in this population would be facilitated by cannibalism and/or parasitic infections by Schistocephalus pungitii cestode. Stomach content analyses revealed an initial ontogenetic dietary shift f…
Exploring species-level taxonomy in the Cryptocephalus flavipes species complex (Coleoptera: Chrysomelidae)
2016
In insects, morphological species identification is often challenging. The discrimination of closely related species may be hampered when only subtle differences in phenotypic characters or a continuum in their variability are present. This is exemplified in the Cryptocephalus flavipes species complex (Coleoptera; Chrysomelidae) where, until now, the species have been discriminated only by the yellow pattern on frons, pronotum, and epipleurae. In the present study, the phylogeny of the C. flavipes species complex was resolved through a multi-locus sequence approach, and the inclusion in the group of the phenotypically similar Cryptocephalus quadripustulatus Gyllenhal, 1813 was evaluated. Su…