Search results for "analysis."

showing 10 items of 26008 documents

New insights into the enameloid microstructure of batoid fishes (Chondrichthyes)

2016

Chondrichthyan teeth are capped with a hypermineralized tissue known as enameloid. Its microstructure displays a hierarchical organization that has increased in structural complexity from a homogenous single-crystallite enameloid (SCE) in early Chondricthyans to the complex multilayered enameloid found in modern sharks (consisting of bundles of crystallites arranged in intriguing patterns). Recent analyses of the enameloid microstructure in batoid fishes, focused on Myliobatiformes and fossil taxa, point to the presence of a bundled (or fibred) multilayered enameloid, a condition proposed as plesiomorphic for Batoidea. In this work, we provide further enameloid analysis for a selection of t…

0106 biological sciencesMyliobatiformes010506 paleontologybiologySem analysisRhina ancylostomaBiodiversityEnameloidbiology.organism_classificationMicrostructure010603 evolutionary biology01 natural sciencesChondrichthyesSymplesiomorphyPaleontologyEvolutionary biologyBatoideaAnimal Science and ZoologyEcology Evolution Behavior and SystematicsTaxonomy0105 earth and related environmental sciencesZoological Journal of the Linnean Society
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Discrimination of common defects in loquat fruit cv. ‘Algerie’ using hyperspectral imaging and machine learning techniques

2021

Abstract Loquat (Eriobotrya japonica L.) is an important fruit for the economy of some regions of Spain that is very susceptible to mechanical damage and physiological disorders. These problems depreciate its value and prevent it from being exported. Visible (VIS) and near infrared (NIR) hyperspectral imaging was used to discriminate between external and internal common defects of loquat cv. ‘Algerie’. Two classifiers, random forest (RF) and extreme gradient boost (XGBoost), and different spectral pre-processing techniques were evaluated in terms of their capacity to distinguish between sound and defective features according to three approaches. In the first approach the fruit pixels were c…

0106 biological sciencesN01 Agricultural engineeringEriobotryaHorticulture01 natural sciences040501 horticultureNon-destructiveClassification rateH20 Plant diseasesArtificial visionMathematicsPixelbiologybusiness.industryHyperspectral imagingPattern recognition04 agricultural and veterinary sciencesClassificationbiology.organism_classificationQualityRandom forestEriobotrya japonicaMultivariate analysisN20 Agricultural machinery and equipmentArtificial intelligence0405 other agricultural sciencesbusinessAgronomy and Crop Science010606 plant biology & botanyFood SciencePostharvest Biology and Technology
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Innovative Alcoholic Drinks Obtained by Co-Fermenting Grape Must and Fruit Juice

2019

In this study, Cabernet Sauvignon and Chardonnay musts, and fruit juices from cherry, kiwi, peach, and strawberry were co-fermented with Saccharomyces cerevisiae EC1118 and Torulaspora delbrueckii UMY196 at two different proportions (80:20 (v/v) and 60:40 (v/v)). The most pleasant fruit-based drink was obtained with Cabernet Sauvignon must and kiwi juice in a proportion of 60:40 and fermented with T. delbrueckii. This beverage was produced in higher volume to simulate a scale-up, and the aromatic profile, sensory description, and consumer acceptability were determined. The most powerful odorants of the kiwi-based drink were ethyl octanoate, phenylethanal, ethyl hexanoate, vinyl-guaiacol, be…

0106 biological sciencesNonanalEndocrinology Diabetes and Metabolismlcsh:QR1-502yeastssecondary metabolite01 natural sciencesBiochemistrySensory analysisfruit wineslcsh:MicrobiologyArticlechemistry.chemical_compound0404 agricultural biotechnologyTorulaspora delbrueckii010608 biotechnologyFood sciencegrape mustMolecular Biologyfruit winebiologysecondary metabolitesEthyl hexanoatefood innovation04 agricultural and veterinary sciencesbiology.organism_classification040401 food sciencechemistryOdorKiwikiwi juiceFermentationFruit juice
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DNA polymorphism at the FRIGIDA gene in Arabidopsis thaliana : extensive nonsynonymous variation is consistent with local selection for flowering time

2002

FRIGIDA (FRI) is a major gene involved in the regulation of flowering time in Arabidopsis thaliana. Nucleotide variation at this gene was investigated by sequencing 25 field ecotypes collected from western Europe. Genetic diversity at FRI was characterized by a high number of haplotypes and an excess of low-frequency polymorphisms. A large excess of intraspecific nonsynonymous variation associated with low synonymous variation was detected along the first exon in the FRI gene. In contrast, no excess of nonsynonymous divergence was detected between A. thaliana and A. lyrata. The Tajima and McDonald and Kreitman tests, however, suggested that this gene has evolved in a nonneutral fashion. Non…

0106 biological sciencesNonsynonymous substitutionArabidopsisFlowers01 natural sciences03 medical and health sciencesExonGenetics[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyArabidopsis thaliana[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular BiologyGeneEcology Evolution Behavior and SystematicsPhylogenyComputingMilieux_MISCELLANEOUS030304 developmental biologyGeneticsRecombination Genetic0303 health sciencesGenetic diversityPolymorphism GeneticbiologyEcotypeArabidopsis ProteinsHaplotypeGenetic VariationSequence Analysis DNAbiology.organism_classificationMajor genePhenotype010606 plant biology & botany
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Nucleotide Variability at the Acetyl Coenzyme A Carboxylase Gene and the Signature of Herbicide Selection in the Grass Weed Alopecurus myosuroides (H…

2004

Acetyl coenzyme A carboxylase (ACCase) is the target of highly effective herbicides. We investigated the nucleotide variability of the ACCase gene in a sample of 18 black-grass (Alopecurus myosuroides [Huds.]) populations to search for the signature of herbicide selection. Sequencing 3,396 bp encompassing ACCase herbicide-binding domain in 86 individuals revealed 92 polymorphisms, which formed 72 haplotypes. The ratio of nonsynonymous versus synonymous substitutions was very low, in agreement with ACCase being a vital metabolic enzyme. Within black grass, most nonsynonymous substitutions were related to resistance to ACCase-inhibiting herbicides. Differentiation between populations was stro…

0106 biological sciencesNonsynonymous substitutionMolecular Sequence DataStatistics as TopicBiologyGenes PlantPoaceae01 natural sciencesLinkage DisequilibriumNucleotide diversity03 medical and health sciences[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyGeneticsVULPIN[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular BiologyGeneAllelesPhylogenyComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biologychemistry.chemical_classificationGenetics0303 health sciencesPolymorphism GeneticBase SequenceModels GeneticHaplotypeAlopecurus myosuroidesGenetic VariationDNASequence Analysis DNAPesticidebiology.organism_classificationProtein Structure TertiaryEnzymeHaplotypeschemistrySoftwareAcetyl-CoA Carboxylase010606 plant biology & botanyMolecular Biology and Evolution
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Ecological niche features override biological traits and taxonomic relatedness as predictors of occupancy and abundance in lake littoral macroinverte…

2018

The degree to which species ecological and biological traits determine their distribution and abundance has intrigued ecologists for a long time, and it has seen a revival in recent years. This topic is important because it provides information about the determinants of species rarity and their conservation implications. We examined the effects of niche breadth, niche position, biological traits and taxonomic relatedness on the interspecific occupancy–abundance relationship, as well as on occupancy and abundance, in lake littoral macroinvertebrates. We sampled 48 lakes in a boreal lake district, found altogether 155 species, and calculated regional occupancy (as the proportion of sites occu…

0106 biological sciencesOccupancyNicheBiology010603 evolutionary biology01 natural sciencesbiologiset ominaisuudettraitsAbundance (ecology)distributionLittoral zoneOccupancy–abundance relationshipEcology Evolution Behavior and SystematicsvesieläimistöEcological nichecommonality analysisEcology010604 marine biology & hydrobiologylevinneisyysInterspecific competitionselkärangattomatekologinen lokerotaxonomic relatednessHabitatta1181occupancy-abundance relationshipEcography
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Understanding the coexistence of competing raptors by Markov chain analysis enhances conservation of vulnerable species.

2016

Understanding ecological interactions among protected species is crucial for correct management to avoid conflicting outcomes of conservation planning. The occurrence of a superior competitor may drive the exclusion of a subordinate contestant, as in Sicily where the largest European population of the lanner falcon is declining because of potentially competing with the peregrine falcon. We measured the coexistence of these two ecologically equivalent species through null models and randomization algorithms on body sizes and ecological niche traits. Lanners and peregrines are morphologically very similar (Hutchinson ratios <1.3) and show 99% diet overlap, and both of these results predict …

0106 biological sciencesOccupancymedia_common.quotation_subjectlannerMarkov chainSettore BIO/05 - ZoologiaBiology010603 evolutionary biology01 natural sciencesCompetition (biology)010605 ornithologycompetition; lanner; Markov chain; Mediterranean habitats; peregrine; perturbation analysis; raptor ecology; species coexistence.Vulnerable speciesraptor ecologyLanner falconEcology Evolution Behavior and Systematicsmedia_commonEcological nichespecies coexistence.EcologyMediterranean habitatperturbation analysibiology.organism_classificationEcologiaHabitatThreatened speciesBiological dispersalAnimal Science and Zoologycompetitionperegrine
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ILTER – The International Long-Term Ecological Research Network as a Platform for Global Coastal and Ocean Observation

2019

International audience; Understanding the threats to global biodiversity and ecosystem services posed by human impacts on coastal and marine environments requires the establishment and maintenance of ecological observatories that integrate the biological, physical, geological, and biogeochemical aspects of ecosystems. This is crucial to provide scientists and stakeholders with the support and knowledge necessary to quantify environmental change and its impact on the sustainable use of the seas and coasts. In this paper, we explore the potential for the coastal and marine components of the International Long-Term Ecological Research Network (ILTER) to fill this need for integrated global obs…

0106 biological sciencesOcean observations010504 meteorology & atmospheric scienceslcsh:QH1-199.5Ecology (disciplines)Climate changeOcean EngineeringAquatic Sciencelcsh:General. Including nature conservation geographical distributionOceanography01 natural sciencesEcosystem servicesMarine ecosystem14. Life underwater[SDU.STU.GM]Sciences of the Universe [physics]/Earth Sciences/Geomorphologymarine ecosystemslcsh:ScienceSWOT analysis0105 earth and related environmental sciencesWater Science and Technology[SDU.OCEAN]Sciences of the Universe [physics]/Ocean AtmosphereGlobal and Planetary ChangeEOVsclimate change; marine ecosystems; ecology; EOVs; SWOT; DEIMSEcology010604 marine biology & hydrobiologyACLDEIMS15. Life on landSWOTclimate change marine ecosystems ecology EOVs SWOT DEIMSTerm (time)Environmental ManagementGeographyclimate change13. Climate actionlcsh:Qecology[SDE.BE]Environmental Sciences/Biodiversity and EcologyMiljöledningGlobal biodiversity
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Time to split Salvia s.l. (Lamiaceae) - New insights from Old World Salvia phylogeny.

2017

Abstract Aims Salvia L. is widely known as the largest genus in the mint family. A morphological modification of the androecium (lever-like stamens) was used to support this genus. However, molecular data revealed that Salvia is polyphyletic. Since phylogenetic studies largely underrepresented Old World Salvia species, we filled this gap and combined new data with existing sequences. The aim of our study was the identification of well-supported clades that provide the basis for evolutionary and taxonomic conclusions. Methods We included ITS data (internal transcribed spacer) from 220 Salvia species, 86 of which were sequenced for the first time. Additionally, the highly variable plastid mar…

0106 biological sciencesOld WorldCharacter evolutionGenetic SpeciationFlowersSalviaGenes Plant010603 evolutionary biology01 natural sciencesEvolution MolecularfoodGenusPolyphylyBotanyGeneticsMint familyPlastidsSalviaCladeMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenybiologyPhylogenetic treeBase SequenceSequence Analysis DNAbiology.organism_classificationfood.foodPhenotype010606 plant biology & botanyMolecular phylogenetics and evolution
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Genetic analysis of organoleptic quality in fresh market tomato. 2. Mapping QTLs for sensory attributes

2001

The organoleptic quality of fresh market tomato can be described by a set of attributes, including fruit appearance, taste, aroma and texture. Sensory analysis is the most-valid method to study organoleptic characteristics, particularly aroma and texture. A range of 144 recombinant inbred lines of tomato derived from a cross between a cherry tomato line and a large-fruited line was evaluated by descriptive sensory profiling. Taste was analyzed through sweetness and sourness, and aroma was analyzed through the overall aroma intensity, together with candy, lemon, citrus-fruit and pharmaceutical aroma. Texture was characterized by firmness, meltiness, mealiness, juiciness and difficulty to swa…

0106 biological sciencesOrganoleptic[SDV.GEN] Life Sciences [q-bio]/GeneticsQuantitative trait locus01 natural sciencesSensory analysis03 medical and health sciencesCherry tomatoInbred strainGeneticsFood scienceComputingMilieux_MISCELLANEOUSAroma030304 developmental biology2. Zero hunger[SDV.GEN]Life Sciences [q-bio]/Genetics0303 health sciencesbiologybusiness.industryfungifood and beveragesGeneral MedicineSweetnessbiology.organism_classificationBiotechnologybusinessAgronomy and Crop ScienceSolanaceae010606 plant biology & botanyBiotechnologyTheoretical and Applied Genetics
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