Search results for "aquaculture."

showing 10 items of 344 documents

Effect of peracetic acid on levels of geosmin, 2-methylisoborneol, and their potential producers in a recirculating aquaculture system for rearing ra…

2019

Abstract In recirculating aquaculture systems (RAS)s, off-flavors and odors, mainly caused by geosmin (GSM) and 2-methylisoborneol (MIB), can accumulate in the flesh of fish from RAS water, reducing the profitability of production. In this study, peracetic acid (PAA) was applied in three application intervals to pump sumps of rainbow trout (Oncorhynchus mykiss) reared in RAS. Using a real-time polymerase chain reaction (qPCR), the potential off-flavor producers were quantified using geoA and MIB synthase genes. Streptomyces was identified as the major GSM producer, and biofilters showed the highest number of potential off-flavor producers. Concentrations of GSM and MIB were analyzed in the …

0106 biological sciencesta1172GeoAAquatic ScienceMIB synthase01 natural scienceschemistry.chemical_compoundAquaculturekirjolohiPeracetic acidFood sciencevesiviljely (kalatalous)neoplasmsoff-flavorsbusiness.industry010604 marine biology & hydrobiologylohikalatrecirculating aquaculture sytemfood and beveragesFish filletRecirculating aquaculture system04 agricultural and veterinary sciencesrainbow troutGeosmindigestive system diseaseschemistryBiofilter040102 fisheries0401 agriculture forestry and fisheries2-MethylisoborneolRainbow troutmaku (aineen ominaisuudet)businessAquacultural Engineering
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A method for reclaiming nutrients from aquacultural waste for use in soilless growth systems

2020

Abstract The aim of this work was to develop a method that allows the recovery of nutrients from aquaculture sludge, not only to alleviate the disposal problem, but also to address the future scarcity of non-renewable fertilizers. This method includes two steps: Nutrient mobilization using aerobic digestion followed by solids precipitation using chitosan as the flocculant. The aerobic digestion experiments were conducted in aerated batch reactors, while a jar test apparatus was used to assess the capacity of chitosan to remove total suspended solids (TSS) and turbidity. During aerobic digestion, the concentration of soluble N (sum of NH4-N, NO2-N, NO3-N) increased from 181 mg/L at the start…

021110 strategic defence & security studiesFlocculationEnvironmental EngineeringSewage0211 other engineering and technologiesFlocculationAquacultureNutrients02 engineering and technology010501 environmental sciencesWaste Disposal Fluid01 natural sciencesChitosanchemistry.chemical_compoundNutrientchemistryAerobic digestionFood scienceTurbidityAeration0105 earth and related environmental sciencesWater Science and TechnologyTotal suspended solidsWaste disposalWater Science and Technology
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Dysbiosis in marine aquaculture revealed through microbiome analysis: reverse ecology for environmental sustainability

2020

AbstractThe increasing demand for products for human consumption is leading to the fast-growing expansion of numerous food sectors such as marine aquaculture (mariculture). However, excessive input of nutrients and pollutants modifies marine ecosystems. Here, we applied a metagenomic approach to investigate these perturbations in samples from marine farms of gilthead seabream cultures. Results revealed dysbiosis and functional imbalance within the net cage with a unique structure, with little interference with samples from the fish microbiota or those collected far away from the coast. Remarkably, below the cage the prokaryotic community was highly similar to the marine microbiome of photic…

0301 basic medicine030106 microbiologyAquacultureApplied Microbiology and BiotechnologyMicrobiology03 medical and health sciencesAquaculturemedicineAnimalsHumansMarine ecosystemMaricultureMicrobiomeBacteriaEcologybiologyEcologybusiness.industryMicrobiotabiology.organism_classificationmedicine.disease030104 developmental biologyMicrobial population biologyMetagenomicsDysbiosisMetagenomeMetagenomicsProteobacteriabusinessDysbiosisFEMS Microbiology Ecology
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Effect of resource availability on evolution of virulence and competition in an environmentally transmitted pathogen

2018

Understanding ecological and epidemiological factors driving pathogen evolution in contemporary time scales is a major challenge in modern health management. Pathogens that replicate outside the hosts are subject to selection imposed by ambient environmental conditions. Increased nutrient levels could increase pathogen virulence by pre-adapting for efficient use of resources upon contact to a nutrient rich host or by favouring transmission of fast-growing virulent strains. We measured changes in virulence and competition in Flavobacterium columnare, a bacterial pathogen of freshwater fish, under high and low nutrient levels. To test competition between strains in genotype mixtures, we devel…

0301 basic medicineAC LYASE ACTIVITYfish diseaseFLEXIBACTER-COLUMNARISDIVERSITYAquacultureApplied Microbiology and BiotechnologybakteeritFish DiseasesAquacultureRAPID EVOLUTIONPathogen1183 Plant biology microbiology virologymedia_commonresource competitionEcologybiologyVirulenceFishesvirulenssibacteriumBiological EvolutionADAPTIVE EVOLUTIONqPCRtaudinaiheuttajatESCHERICHIA-COLIFISH FARMSTRADE-OFFGenotypeympäristötekijätmedia_common.quotation_subject030106 microbiologyZoologyVirulenceMicrobiologyFlavobacteriumCompetition (biology)Nutrient density03 medical and health sciencesFlavobacterium columnareAnimalsravinnepitoisuusHost (biology)business.industryta1183FLAVOBACTERIUM-COLUMNAREIN-VITRO PASSAGESbiology.organism_classificationkalatauditinterference competitionFlavobacterium columnareta1181businessBacteria
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Potential benefits of high-added-value compounds from aquaculture and fish side streams on human gut microbiota

2021

Background: Human gut microbiota dysbiosis has been linked to a higher risk of non-communicable diseases (NCDs) such us inflammatory disorders, allergy and obesity. Specific dietary strategies, including the use of specific food supplements targeted to microbiota modulation, have been suggested to be especially relevant in reducing the risk of NCDs. In this regard, marine environment is considered as a pivotal source of nutrients and bioactive compounds such as polyunsaturated fatty acids, polysaccharides and active peptides. These compounds, including algae- (alginate, fucoidan) and animal-derived polysaccharides (chitin, chitosan), among others, have been widely studied. The use of these …

0301 basic medicineAquatic lifeGut microbiotaGut floraFats03 medical and health sciencesHuman healthHuman gutAquaculturePolysaccharidesmedicineFood science2. Zero hungerchemistry.chemical_classification030109 nutrition & dieteticsbiologybusiness.industryProteinmedicine.diseasebiology.organism_classification3. Good healthSide streams030104 developmental biologychemistry13. Climate actionFish <Actinopterygii>businessDysbiosisFood ScienceBiotechnologyPolyunsaturated fatty acid
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Coexposure to sulfamethoxazole and cadmium impairs development and attenuates transcriptional response in sea urchin embryo

2017

Abstract Among sulfonamides, sulfamethoxazole represents one of the most widely employed. A considerable amount of sulfamethoxazole is introduced into the marine environment after utilization in aquaculture. The cytotoxicity of sulfamethoxazole relies mainly on arylhydroxylamine metabolites and it is associated with the production of reactive oxygen species. Cadmium represents a metal largely employed in several anthropic activities and it is toxic for all living organisms even at low concentrations. Since it is not degraded, cadmium irreversibly accumulates into cells. In order to understand the mechanisms of response to changes in the chemical environment, we investigated by light microsc…

0301 basic medicineEmbryo NonmammalianSulfamethoxazoleHealth Toxicology and Mutagenesis; Defense mechanisms;Gene ExpressionAquaculture010501 environmental sciencesmedicine.disease_cause01 natural sciencesCoexposureToxicologychemistry.chemical_compoundCadmium ChlorideGene expression profile; Stress responsechemistry.chemical_classificationCadmiumeducation.field_of_studyEchinodermSulfamethoxazoleChemistry (all)General MedicinePollutionCadmiumDefense mechanismEchinodermsmedicine.drugProgrammed cell deathEnvironmental EngineeringPopulationchemistry.chemical_elementSettore BIO/11 - Biologia MolecolareCadmium chlorideBiologyMicrobiologyCoexposure; Defense mechanisms; Echinoderms; Gene expression profile; Stress response; Chemistry (all); Environmental Chemistry03 medical and health sciencesDetoxificationmedicineAnimalsEnvironmental Chemistryeducation0105 earth and related environmental sciencesReactive oxygen speciesStress responsePublic Health Environmental and Occupational HealthGeneral ChemistryGene expression profile030104 developmental biologychemistrySea UrchinsWater Pollutants ChemicalOxidative stress
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Intensive aquaculture selects for increased virulence and interference competition in bacteria

2016

Although increased disease severity driven by intensive farming practices is problematic in food production, the role of evolutionary change in disease is not well understood in these environments. Experiments on parasite evolution are traditionally conducted using laboratory models, often unrelated to economically important systems. We compared how the virulence, growth and competitive ability of a globally important fish pathogen, Flavobacterium columnare , change under intensive aquaculture. We characterized bacterial isolates from disease outbreaks at fish farms during 2003–2010, and compared F. columnare populations in inlet water and outlet water of a fish farm during the 2010 outbre…

0301 basic medicineFish farmingPopulationevoluutioVirulenceDiseaseBiologyFlavobacteriumGeneral Biochemistry Genetics and Molecular BiologyFish DiseasesFlavobacterium columnare03 medical and health sciencesAquacultureFlavobacteriaceae InfectionsevolutionAnimalsSelection Geneticeducationvesiviljely (kalatalous)FinlandResearch ArticlesGeneral Environmental ScienceExperimental evolutioneducation.field_of_studyGeneral Immunology and MicrobiologyEcologyIntensive farmingbusiness.industryta1183virulenssiGeneral MedicineBiological Evolutionvirulence030104 developmental biologyaquaculturePerchesFood processingMicrobial Interactionsta1181General Agricultural and Biological SciencesbusinessSalmonidaefish farmingpathogen
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Henneguya zschokkei (Myxozoa) infection in cultured whitefish: Age-dependence, seasonality and distribution within host

2017

Abstract Whitefish ( Coregonus lavaretus ) is an important species for European fisheries and aquaculture. Recently, the myxosporean Henneguya zschokkei has been observed to infect the muscles of whitefish in fish farms. Plasmodia of H. zschokkei prevent marketing of the fillet and cause economic losses. The factors associated with occurrence of the parasite in fish farms have not been investigated previously. We studied age-dependence, seasonality, and within-host distribution of H. zschokkei plasmodia in farmed whitefish by examining a total of 1599 fish. Distribution of plasmodia within the fish was not uniform. When the fillet was divided into parts, the number of plasmodia was positive…

0301 basic medicineFish farmingZoologyCoregonus lavaretusAquatic ScienceMyxosporea03 medical and health sciencesfoodStockingCoregonus lavaretusAquacultureparasitic diseasesParasite hostingMyxozoabiologyfood.dishHatchingbusiness.industryHenneguya zschokkei030108 mycology & parasitologybiology.organism_classificationFisheryEuropean whitefishta1181Henneguya zschokkeibusinessAquaculture
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Complete Genome Sequence of an Aquaculture-Associated Phage, FL-1, Infecting Flavobacterium spp

2017

Flavobacterium spp. are abundant and widespread in freshwater environments (1, 2). Despite the prevalence of the members in this genus, the phages infecting Flavobacterium spp. are less known. So far, most of the phages studied in detail infect fish pathogenic members of the genus, such as F. psychrophilum (3). The phage FL-1 and its Flavobacterium sp. host strain B183 were previously isolated from a water sample from a fish farm in Central Finland. Transmission electron microscopy revealed FL-1 to be a member of the family Myoviridae (4). In addition to the isolation host, FL-1 also infects multiple Flavobacterium sp. isolates and strains of the fish pathogen F. columnare, the causative ag…

0301 basic medicineGeneticsWhole genome sequencingbiologybusiness.industrycomplete genome sequenceeducation030106 microbiology1184 Genetics developmental biology physiologyZoologybiology.organism_classificationGenome6. Clean water03 medical and health sciences030104 developmental biologyAquacultureflavobacteriumaquaculture-associated phageGenetics1182 Biochemistry cell and molecular biologybusinessMolecular BiologyFlavobacteriumGenome Announcements
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In vivo fluorescent cercariae reveal the entry portals of Cardiocephaloides longicollis (Rudolphi, 1819) Dubois, 1982 (Strigeidae) into the gilthead …

2019

Background Despite their complex life-cycles involving various types of hosts and free-living stages, digenean trematodes are becoming recurrent model systems. The infection and penetration strategy of the larval stages, i.e. cercariae, into the fish host is poorly understood and information regarding their entry portals is not well-known for most species. Cardiocephaloides longicollis (Rudolphi, 1819) Dubois, 1982 (Digenea, Strigeidae) uses the gilthead seabream (Sparus aurata L.), an important marine fish in Mediterranean aquaculture, as a second intermediate host, where they encyst in the brain as metacercariae. Labelling the cercariae with in vivo fluorescent dyes helped us to track the…

0301 basic medicineGillCardiocephaloides longicollis030231 tropical medicineSuccinimidesZoologyAquacultureTrematode InfectionsCarboxyfluorescein diacetate succinimidyl esterDigeneaHost-Parasite Interactionslcsh:Infectious and parasitic diseasesFish Diseases03 medical and health scienceschemistry.chemical_compound0302 clinical medicineCercarial penetration patternCercarial survival and activityMetacercarial encystmentAnimalsHelminthsMetacercariaelcsh:RC109-216CercariaCardiocephaloides longicollisFluorescent DyesInfectivityLife Cycle StagesbiologyResearchIntermediate hostAquatic animalFluoresceinsbiology.organism_classificationSea Bream030104 developmental biologyInfectious DiseaseschemistryLarvaBenzimidazolesParasitologyTrematodaDigeneaParasites &amp; Vectors
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