Search results for "arabidopsis"

showing 10 items of 241 documents

Sorting signals in the cytosolic tail of plant p24 proteins involved in the interaction with the COPII coat.

2004

The ability of the cytosolic tail of a plant p24 protein to bind COPI and COPII subunits from plant and animal sources in vitro has been examined. We have found that a dihydrophobic motif in the -7,-8 position (relative to the cytosolic carboxy-terminus), which strongly cooperates with a dilysine motif in the -3,-4 position for COPI binding, is required for COPII binding. In addition, we show that COPI and COPII coat proteins from plant cytosol compete for binding to the sorting motifs in these tails. Only in the absence of the dilysine motif in the -3,-4 position or after COPI depletion could we observe COPII binding to the p24 tail. This competition is not observed when using rat liver cy…

CoatPhysiologyAmino Acid MotifsArabidopsisReceptors Cytoplasmic and NuclearPlant ScienceBiologyCoat Protein Complex ICytosolAnimalsCOPIIBinding SitesVesicular-tubular clusterArabidopsis ProteinsCell BiologyGeneral MedicineCOPIPlant cellIn vitroPeptide FragmentsCell biologyRatsCytosolProtein TransportRat liverCOP-Coated VesiclesProtein BindingSignal TransductionPlantcell physiology
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A genetic approach to dissect the role of prefoldins in Arabidopsis

2021

SummaryThe prefoldin complex (PFDc) was identified in humans as co-chaperone of the cytosolic chaperonin TRiC/CCT. It is conserved in eukaryotes and is composed of subunits PFD1 to 6. PFDc-TRiC/CCT operates folding actin and tubulins. In addition to this function, PFDs participate in a wide range of cellular processes, both in the cytoplasm and in the nucleus, and their malfunction cause developmental alterations and disease in animals, and altered growth and environmental responses in yeast and plants. Genetic analyses in yeast indicate that not all functions performed by PFDs require the participation of the canonical complex. The lack of systematic genetic analyses in higher eukaryotes m…

CytoplasmProtein subunitArabidopsisMutantBiologyPrefoldin complexbiology.organism_classificationTranscription factorActinFunction (biology)Cell biology
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The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants

2008

We report the draft genome sequence of the model moss Physcomitrella patens and compare its features with those of flowering plants, from which it is separated by more than 400 million years, and unicellular aquatic algae. This comparison reveals genomic changes concomitant with the evolutionary movement to land, including a general increase in gene family complexity; loss of genes associated with aquatic environments (e.g., flagellar arms); acquisition of genes for tolerating terrestrial stresses (e.g., variation in temperature and water availability); and the development of the auxin and abscisic acid signaling pathways for coordinating multicellular growth and dehydration response. The …

DNA RepairRetroelementsPhyscomitrellaArabidopsisPhyscomitrella patensGenes PlantGenomeMagnoliopsidaPhylogeneticsGene DuplicationGene familyAnimalsGenePhylogenyPlant ProteinsRepetitive Sequences Nucleic AcidGeneticsWhole genome sequencingMultidisciplinarybiologyDehydrationfood and beveragesComputational BiologyOryzaSequence Analysis DNAbiology.organism_classificationAdaptation PhysiologicalBiological EvolutionBryopsidaMulticellular organismMultigene FamilyChlamydomonas reinhardtiiGenome PlantMetabolic Networks and PathwaysSignal Transduction
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Putrescine as a signal to modulate the indispensable ABA increase under cold stress.

2009

2 páginas -- PAGS nros. 219-220

DNA BacterialAcclimatizationMutantArabidopsisCold acclimationPlant ScienceBiologyGenes Plantchemistry.chemical_compoundGene Expression Regulation PlantpolyamineFreezingCold acclimationputrescineMode of actionAnalysis of VarianceArabidopsis ProteinsReverse Transcriptase Polymerase Chain ReactionGene Expression ProfilingfungiWild typefood and beveragesfreezing toleranceArticle AddendumComplementationCold TemperatureMutagenesis InsertionalArginine decarboxylasechemistryBiochemistryABARNA PlantMutationPutrescinegene expressionPolyamineArginine decarboxylaseAbscisic AcidResearch ArticlePlant signalingbehavior
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Absence of endo-1,4-β-glucanase KOR1 alters the Jasmonate-dependent defence response to Pseudomonas syringae in Arabidopsis

2014

During plant-pathogen interactions, the plant cell wall forms part of active defence against invaders. In recent years, cell wall-editing enzymes, associated with growth and development, have been related to plant susceptibility or resistance. Our previous work identified a role for several tomato and Arabidopsis endo-1,4-β-glucanases (EGs) in plant-pathogen interactions. Here we studied the response of the Arabidopsis thaliana T-DNA insertion mutant lacking EG Korrigan1 (KOR1) infected with Pseudomonas syringae. KOR1 is predicted to be an EG which is thought to participate in cellulose biosynthesis. We found that kor1-1 plants were more susceptible to P. syringae, and displayed severe dise…

DNA BacterialPhysiologyLipoxygenaseendo-glucanasesMutantArabidopsisPseudomonas syringaeCyclopentanesPlant ScienceMicrobiologychemistry.chemical_compoundCellulaseCell WallGene Expression Regulation PlantArabidopsisPseudomonas syringaeArabidopsis thalianaOxylipinsJasmonateplant responsePlant DiseasesbiologyArabidopsis ProteinsJasmonic acidfungiCalloseMembrane Proteinsfood and beveragesGlucanasebiology.organism_classificationchemistrycell wallSalicylic AcidAgronomy and Crop ScienceJournal of Plant Physiology
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Abscisic acid and desiccation-dependent expression of a novel putative SNF5-type chromatin-remodeling gene in Pisum sativum.

2006

Snf5-like proteins are components of multiprotein chromatin remodeling complexes involved in the ATP-dependent alteration of DNA-histone contacts. Mostly described in yeast and animals, the only plant SNF5-like gene characterized so far has been BSH from Arabidopsis thaliana (L.) Heynh. We report the cloning and characterization of expression of a SNF5-like gene from pea (Pisum sativum L. cv. Lincoln), which has been designated PsSNF5. Southern analysis showed a single copy of the gene in the pea genome. The cDNA contained a 723bp open reading frame encoding a 240 amino acid protein of 27.4kDa with a potential nuclear localization signal. PsSNF5 protein sequence closely resembled BSH, with …

DNA ComplementaryDNA PlantPhysiologyChromosomal Proteins Non-HistoneMolecular Sequence DataArabidopsisPlant ScienceChromatin remodelingComplementary DNAArabidopsisGeneticsArabidopsis thalianaAmino Acid SequenceCloning MolecularDesiccationPeptide sequenceGeneCells CulturedConserved SequencePhylogenyGeneticsExpressed sequence tagbiologyBase SequenceSequence Homology Amino AcidReverse Transcriptase Polymerase Chain ReactionPeasbiology.organism_classificationChromatinRecombinant ProteinsChromatinCell biologyPlant LeavesSeedsAbscisic AcidPlant physiology and biochemistry : PPB
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Lack of phosphoserine phosphatase activity alters pollen and tapetum development in Arabidopsis thaliana.

2015

Formation of mature pollen grain, an essential process for the reproduction of higher plants, is affected in lines that are deficient in the enzymes of the phosphorylated pathway of serine biosynthesis (PPSB). Mutants of phosphoserine phosphatase (PSP), the enzyme that catalyses the last step of PPSB, are embryo-lethal. When they are complemented with a construct carrying PSP1 cDNA under the control of the 35S promoter (psp1.1 35S:PSP1), which is poorly expressed in anther tissues, plants display a wild-type phenotype, but are male-sterile. The pollen from the psp1.1 35S:PSP1 lines are shrunken and unviable. Here we report the morphological alterations that appear in the psp1.1 35S:PSP1 lin…

DNA ComplementaryStamenArabidopsisPlant ScienceFlowersBiologymedicine.disease_causePollen coatMicrosporePollenGeneticsmedicineSerineArabidopsis thalianaPlant OilsPollinationPromoter Regions GeneticPlant ProteinsTapetumfood and beveragesPhosphoserine phosphataseGeneral Medicinebiology.organism_classificationPlants Genetically ModifiedPhosphoric Monoester HydrolasesBiochemistryPollenAgronomy and Crop SciencePollen wallPlant science : an international journal of experimental plant biology
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The Implication of Xyloglucan Endotransglucosylase/Hydrolase (XTHs) in Tomato Fruit Infection by Penicillium expansum Link. A

2007

In general, cell wall-degrading enzymes produced by plant pathogenic fungi are considered important pathogenicity factors. In this work, we evaluate the implication of xyloglucan endotransglucosylase/ hydrolase (XTHs), a potential hemicellulosic repairing enzyme, in the infection mechanism process by the fungus. This study investigated the SIXTHS expresion and xyloglucan endotransglucosylase (XET) activity during infection of two tomato fruit cultivars by Penicillium expansum Link. A. In infected fruits, XET specific activity decreased drastically after long infection periods, 24 and 48 h for Canario and Money Maker tomato fruits, respectively. Real Time RT-PCR of eleven SIXTHS also showed …

DNA PlantArabidopsisGene ExpressionFungusMicrobiologyCell wallchemistry.chemical_compoundSolanum lycopersicumLegumePlant DiseasesbiologyfungiPenicilliumGlycosyltransferasesfood and beveragesGeneral ChemistryFungi imperfectiXyloglucan endotransglucosylasebiology.organism_classificationXyloglucanchemistryBiochemistryFruitPenicillium expansumGeneral Agricultural and Biological SciencesSequence AlignmentSolanaceaeJournal of Agricultural and Food Chemistry
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Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.

2000

Arabidopsis thaliana is an important model system for plant biologists. In 1996 an international collaboration (the Arabidopsis Genome Initiative) was formed to sequence the whole genome of Arabidopsis and in 1999 the sequence of the first two chromosomes was reported. The sequence of the last three chromosomes and an analysis of the whole genome are reported in this issue. Here we present the sequence of chromosome 3, organized into four sequence segments (contigs). The two largest (13.5 and 9.2 Mb) correspond to the top (long) and the bottom (short) arms of chromosome 3, and the two small contigs are located in the genetically defined centromere. This chromosome encodes 5,220 of the rough…

DNA PlantSequence analysisArabidopsisplantGenomeComplete sequenceArabidopsisGene DuplicationCentromerePlant genomics; model organismHumansgenomic structureGenemodel organismPlant ProteinsGeneticsMultidisciplinarybiologyChromosomeChromosome MappingSequence Analysis DNAbiology.organism_classificationPlant genomicsgenome sequencingChromosome 3plant; genome sequencing; genomic structureGenome Plant
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The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

2010

Evolution in Action Rates of evolution in gene and genome sequences have been estimated, but these estimates are subject to error because many of the steps of evolution over the ages are not directly measurable or are hidden under subsequent changes. Ossowski et al. (p. 92 ) now provide a more accurate measurement of how often spontaneous mutations arise in a nuclear genome. Mutations arising over 30 generations were compared by sequencing DNA from individual Arabidopsis thaliana plants. UV- and deamination-induced mutagenesis appeared to bias the type of mutations found.

DNA PlantUltraviolet RaysMutantArabidopsismedicine.disease_causeArticlechemistry.chemical_compoundCytosineINDEL MutationArabidopsismedicineArabidopsis thalianaSequence DeletionGeneticsMutationMultidisciplinarybiologyMutagenesisSequence Analysis DNAMutation AccumulationDNA Methylationbiology.organism_classificationMolecular biologychemistryDeaminationMutationDNA IntergenicINDEL MutationCytosineGenome Plant
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