Search results for "arabinose"

showing 10 items of 15 documents

The dnaK operon of Streptomyces coelicolor encodes a novel heat-shock protein which binds to the promoter region of the operon

1995

Transcriptional studies have demonstrated that the dnaK gene of Streptomyces coelicolor A3(2) is contained within a 4.3 kb operon. The operon is transcribed from a single (transiently) heat-inducible promoter, dnaKp, that resembles the typical vegetative (sigma 70-recognized) eubacterial consensus promoter sequence. dnaK transcription was found to be heat-inducible at all stages of development in surface-grown cultures. In addition, at the normal growth temperature of 30 degrees C, dnaK transcript levels were shown to vary at different stages of development, being more abundant in young germinating cultures and in mycelium undergoing sporogenesis. The nucleotide sequence of the dnaK operon …

Transcription GeneticOperonMolecular Sequence Datalac operonRepressorMicrobiologytrp operonOpen Reading FramesOperonEscherichia coligal operonHSP70 Heat-Shock ProteinsAmino Acid SequencePromoter Regions GeneticMolecular BiologyHeat-Shock ProteinsGeneticsBinding SitesBase SequenceSequence Homology Amino AcidbiologyEscherichia coli ProteinsStreptomyces coelicolorCell DifferentiationPromoterGene Expression Regulation BacterialBlotting Northernbiology.organism_classificationMolecular biologyRecombinant ProteinsStreptomycesGenes BacterialbacteriaL-arabinose operonHeat-Shock ResponseProtein BindingMolecular Microbiology
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L-arabinose adsorption on hydrogenated and hydrated ruthenium catalyst

2012

L-arabinose ruthenium catalysis
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A novel galactose- and arabinose-specific lectin from the sponge Pellina semitubulosa: isolation, characterization and immunobiological properties.

1992

A new lectin from the sponge Pellina semitubulosa is derived which was extracted and purified to homogeneity. The purified lectin is probably a hexamer of polypeptide chains (each M(r) 34,000) which are covalently linked via disulfide linkages; the isoelectric point is 6.1. The lectin displays the following specificities: D-galactose (50% inhibition of hemagglutination at 0.2 mM) = L-arabinose (0.2 mM) greater than D-fucose (1.5 mM) greater than D-glucose (3.0 mM). It precipitates human erythrocytes (A1, A2, A1B, B, and O) with a titer between 2(8) and 2(11) and erythrocytes from sheep and rabbits with a titer between 2(5) and 2(10). The Pellina lectin displays a strong mitogenic effect on …

Interleukin 2HemagglutinationChemical PhenomenaLymphocyte ActivationBiochemistrySubstrate Specificitychemistry.chemical_compoundLectinsmedicineAnimalsLymphocytesAmino AcidsbiologyChemistry PhysicalMacrophagesInterleukinLectinGalactoseGeneral MedicineHemagglutination TestsMolecular biologyArabinosePoriferaTiterIsoelectric pointchemistryBiochemistryConcanavalin AGalactosebiology.proteinInterleukin-2medicine.drugInterleukin-1Biochimie
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l-Arabinose Conformers Adsorption on Ruthenium Surfaces: A DFT Study

2012

Adsorption of 5 L-arabinose tautomers – one acyclic and four cyclic (α and β, pyranose and furanose) species – on a ruthenium surface was studied as a precursor-process of the, nowadays more and more, industrially important sugar catalytic hydrogenation on metal surfaces in water medium. The study was mostly referred to a 37-atom metal catalyst fragment, even though border-effects on the adsorption processes were also checked employing a 61-atom metal fragment. In order to figure out conformational effects on the title process the tautomer flexibility was, at first, investigated by the genetic-algorithm based code Balloon, considering the conformational spaces of the different aquo tautomer…

chemistry.chemical_element02 engineering and technology010402 general chemistry01 natural sciencesMetalAdsorptionComputational chemistryPhysical and Theoretical Chemistryl-Arabinose species conformational analysis ruthenium catalysts adsorption energies DFT studiesConformational isomerismchemistry.chemical_classification021001 nanoscience & nanotechnologyFuranoseTautomer0104 chemical sciencesSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsRutheniumGeneral EnergyPyranosechemistrySettore CHIM/03 - Chimica Generale E Inorganicavisual_artvisual_art.visual_art_mediumDensity functional theory0210 nano-technologyThe Journal of Physical Chemistry C
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Reaction pathways of glucose oxidation by ozone under acidic conditions.

2009

The ozonation of d-glucose-1-(13)C, 2-(13)C, and 6-(13)C was carried out at pH 2.5 in a semi-batch reactor at room temperature. The products present in the liquid phase were analyzed by GC-MS, HPAEC-PAD, and (13)C NMR spectroscopy. Common oxidation products of glucose have also been submitted to identical ozonation conditions. For the first time, a pentaric acid was identified and its formation quantitatively correlated to the loss of C-6 of glucose in the form of carbon dioxide. Potential mechanisms for the formation of this pentaric acid are discussed. The well-accepted pathway involving the anomeric position in glucose, gluconic acid, arabinose, and carbon dioxide is reinvestigated. The …

ArabinoseOzoneDecarboxylationInorganic chemistry02 engineering and technologyUronic acidoxidation -mechanism01 natural sciencesBiochemistryGluconatesMass SpectrometryAnalytical Chemistrychemistry.chemical_compoundOzoneD-Glucose[ CHIM.OTHE ] Chemical Sciences/OtherOrganic chemistrydecarboxylationComputingMilieux_MISCELLANEOUS010405 organic chemistryOrganic ChemistryGeneral MedicineCarbon-13 NMRCarbon DioxideHydrogen-Ion Concentration021001 nanoscience & nanotechnologyArabinoseketo acidCarbon0104 chemical sciencesuronic acidGlucosechemistryCarbon dioxideGluconic acid0210 nano-technology[CHIM.OTHE]Chemical Sciences/OtherOxidation-Reductionpectic acidCarbohydrate research
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L-Arabinose adsorption on a Ru cluster

2011

L-Arabinose ruthenium DFT
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Shell matrices of recent rhynchonelliform brachiopods: microstructures and glycosylation studies.

2007

ABSTRACTLike most metazoan biomineralisations, the brachiopod shell is the end product of a biologically controlled calcification process. The main agent of the control is the extracellular matrix, which is secreted by the outer mantle epithelium. This matrix mediates the calcification process by allowing crystal nucleation and elongation in specific orientations and finally, by stopping crystal growth. The proteinaceous moiety of brachiopod shell matrices has been extensively studied. Less known are the post-translational modifications that occur in these matrices, in particular glycosylations. In this comparison of five species of Recent articulated brachiopods, the ratio of soluble to in…

Arabinose010506 paleontologyGlycosylationBiologyPolysaccharide01 natural sciencesFucose03 medical and health scienceschemistry.chemical_compoundChitinGlucosamineMonosaccharide[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsHPAE-PAD030304 developmental biology0105 earth and related environmental sciencesGeneral Environmental Sciencechemistry.chemical_classification0303 health sciencesshell microstructures[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialschemistryBiochemistrymonosaccharidesSEMGeneral Earth and Planetary SciencesGlycoproteinSDS-PAGE
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Photocatalytic formation of H2 and value-added chemicals in aqueous glucose (Pt)-TiO2 suspension

2016

Abstract Commercial and home prepared bare and Pt-supported TiO2 samples were used as the photocatalysts for the aqueous photo-conversion of glucose at ambient pressure and temperature. Aerobic and anaerobic conditions were used to study the products of glucose degradation both in the liquid (arabinose, erythrose, gluconic acid, glucaric acid, fructose and formic acid) and gaseous (H2 and CO2) phases. The distribution of these molecules was different in the presence of the various powders, depending on the structural and physico-chemical properties of the materials, and Pt resulted essential for the anaerobic production of H2. The home prepared samples resulted more active than the commerci…

ArabinoseFormic acidInorganic chemistryPartial oxidationEnergy Engineering and Power TechnologyCondensed Matter Physic02 engineering and technology010402 general chemistry01 natural sciencesGlucaric Acidchemistry.chemical_compoundPhotocatalysiTiO2Aqueous solutionRenewable Energy Sustainability and the EnvironmentBrookiteFructose021001 nanoscience & nanotechnologyCondensed Matter Physics0104 chemical sciencesGlucoseFuel TechnologychemistryErythrosevisual_artH2Gluconic acidvisual_art.visual_art_mediumHigh value chemicalSettore CHIM/07 - Fondamenti Chimici Delle Tecnologie0210 nano-technologyInternational Journal of Hydrogen Energy
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Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
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Ethanol Production by Selected Intestinal Microorganisms and Lactic Acid Bacteria Growing under Different Nutritional Conditions

2016

To gain some specific insight into the roles microorganisms might play in non-alcoholic fatty liver disease (NAFLD), some intestinal and lactic acid bacteria and one yeast (Anaerostipes caccae, Bacteroides thetaiotaomicron, Bifidobacterium longum, Enterococcus fecalis, Escherichia coli, Lactobacillus acidophilus, Lactobacillus fermentum, Lactobacillus plantarum, Weissella confusa, Saccharomyces cerevisiae) were characterized by high performance liquid chromatography for production of ethanol when grown on different carbohydrates: hexoses (glucose and fructose), pentoses (arabinose and ribose), disaccharides (lactose and lactulose), and inulin. Highest amounts of ethanol were produced by S. …

0301 basic medicineMicrobiology (medical)Bifidobacterium longumfecal slurriesLactobacillus fermentum030106 microbiologylcsh:QR1-502Weissella confusaBiologydigestive systemMicrobiologylcsh:Microbiologyfructose03 medical and health scienceschemistry.chemical_compoundfluids and secretionsLactobacillus acidophilusEthanol fuelarabinoseOriginal Researchinulinnon-alcoholic fatty liver diseasefood and beveragesFructosebiology.organism_classificationLactic acid030104 developmental biologyBiochemistrychemistrylactuloseFermentationethanolLactobacillus plantarumFrontiers in Microbiology
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