Search results for "aria"

showing 10 items of 17848 documents

Synchronous attack is advantageous: mixed genotype infections lead to higher infection success in trematode parasites

2011

Co-infecting parasite genotypes typically compete for host resources limiting their fitness. The intensity of such competition depends on whether parasites are reproducing in a host, or using it primarily as a transmission vehicle while not multiplying in host tissues (referred to as ‘competition hypothesis’). Alternatively, simultaneous attack and co-infection by several parasite genotypes might facilitate parasite infection because such a diverse attack could present an additional challenge to host immune defence (referred to as ‘facilitation hypothesis’). We tested the competition hypothesis by comparing the production of transmission stages (cercariae) from snails infected with one or …

0106 biological sciencesCompetitive BehaviorGenotypemedia_common.quotation_subjectZoologyTrematode InfectionsBiology010603 evolutionary biology01 natural sciencesPolymerase Chain ReactionGeneral Biochemistry Genetics and Molecular BiologyCompetition (biology)Host-Parasite Interactions03 medical and health sciencesGenotypeParasite hostingAnimalsCercariaResearch ArticlesFinland030304 developmental biologyGeneral Environmental Sciencemedia_commonLymnaea0303 health sciencesAnalysis of VarianceGeneral Immunology and MicrobiologyHost (biology)Transmission (medicine)ReproductionGenetic VariationGeneral Medicinebiology.organism_classificationObligate parasiteOncorhynchus mykissImmunologyFacilitationTrematodaTrematodaGeneral Agricultural and Biological SciencesProceedings of the Royal Society B-Biological Sciences
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Types of names of taxa belonging to theCentaurea cinerariagroup (Compositae) described from Sicily

2016

The group of Centaurea (sect. Acrolophus) cineraria (Compositae) in Sicily includes four currently accepted species plus four taxa that have been considered, with some doubt, as subspecies of one of them (C. panormitana). In total, discounting recombinations and replacement names, 11 names (seven specific, three varietal, one of a forma), all based on Sicilian material, were published by past authors for these eight taxa. Two of the names had their holotype indicated upon publication; two have been lectotypified previously; six (C. busambarensis var. obtusiloba, C. cineraria var. soluntina, C. cineraria var. umbrosa, C. todaroi, C. todaroi f. seguenzae and C. ucriae) are lectotypified here;…

0106 biological sciencesCompositaeAcrolophusCentaureaPlant ScienceAsteraceaeSubspecies010603 evolutionary biology01 natural sciencesCinerariaBotanyTypificationTypificationSicilyNomenclatureCentaurea cinerariaEcology Evolution Behavior and SystematicsbiologyNomenclatureSettore BIO/02 - Botanica SistematicaHolotypebiology.organism_classificationItalyCentaureaMediterranean flora010606 plant biology & botanyWilldenowia
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Model‐based approaches to unconstrained ordination

2014

Summary Unconstrained ordination is commonly used in ecology to visualize multivariate data, in particular, to visualize the main trends between different sites in terms of their species composition or relative abundance. Methods of unconstrained ordination currently used, such as non-metric multidimensional scaling, are algorithm-based techniques developed and implemented without directly accommodating the statistical properties of the data at hand. Failure to account for these key data properties can lead to misleading results. A model-based approach to unconstrained ordination can address this issue, and in this study, two types of models for ordination are proposed based on finite mixtu…

0106 biological sciencesComputer science010604 marine biology & hydrobiologyEcological ModelingModel selectionLatent variableMixture modelcomputer.software_genre010603 evolutionary biology01 natural sciencesData typeStatistical inferenceOrdinationMultidimensional scalingData miningLatent variable modelcomputerEcology Evolution Behavior and SystematicsMethods in Ecology and Evolution
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Accounting for preferential sampling in species distribution models

2019

D. C., A. L. Q. and F. M. would like to thank the Ministerio de Educación y Ciencia (Spain) for financial support (jointly financed by the European Regional Development Fund) via Research Grants MTM2013‐42323‐P and MTM2016‐77501‐P, and ACOMP/2015/202 from Generalitat Valenciana (Spain). Species distribution models (SDMs) are now being widely used in ecology for management and conservation purposes across terrestrial, freshwater, and marine realms. The increasing interest in SDMs has drawn the attention of ecologists to spatial models and, in particular, to geostatistical models, which are used to associate observations of species occurrence or abundance with environmental covariates in a fi…

0106 biological sciencesComputer scienceQH301 BiologySpecies distributionPoint processesStochastic partial differential equation01 natural scienceshttp://aims.fao.org/aos/agrovoc/c_6774EspèceAbundance (ecology)StatisticsPesqueríasQAOriginal Researchhttp://aims.fao.org/aos/agrovoc/c_241990303 health sciencesEcologyU10 - Informatique mathématiques et statistiquesSampling (statistics)Integrated nested Laplace approximationstochastic partial differential equationVariable (computer science)symbolsÉchantillonnageSpecies Distribution Models (SDMs)Modèle mathématiqueBayesian probabilityNDASDistribution des populations010603 evolutionary biologyQH30103 medical and health sciencessymbols.namesakeCovariateQA MathematicsSDG 14 - Life Below WaterCentro Oceanográfico de Murciaspecies distribution modelsRelative species abundanceEcology Evolution Behavior and Systematicspoint processes030304 developmental biologyNature and Landscape Conservationhttp://aims.fao.org/aos/agrovoc/c_6113http://aims.fao.org/aos/agrovoc/c_7280Markov chain Monte Carlointegrated nested Laplace approximationU30 - Méthodes de rechercheBayesian modelling
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Calibrating Expert Assessments Using Hierarchical Gaussian Process Models

2020

Expert assessments are routinely used to inform management and other decision making. However, often these assessments contain considerable biases and uncertainties for which reason they should be calibrated if possible. Moreover, coherently combining multiple expert assessments into one estimate poses a long-standing problem in statistics since modeling expert knowledge is often difficult. Here, we present a hierarchical Bayesian model for expert calibration in a task of estimating a continuous univariate parameter. The model allows experts' biases to vary as a function of the true value of the parameter and according to the expert's background. We follow the fully Bayesian approach (the s…

0106 biological sciencesComputer sciencepäätöksentekoRECONCILIATIONInferencecomputer.software_genre01 natural sciencesSTOCK ASSESSMENTenvironmental management010104 statistics & probabilityJUDGMENTSELICITATIONkalakantojen hoito111 Mathematicstilastolliset mallitReliability (statistics)Applied Mathematicsgaussiset prosessitfisheries sciencebias correctionexpert elicitationPROBABILITY62P1260G15symbols62F15Statistics and ProbabilityarviointimenetelmätBayesian probabilityenvironmental management.Bayesian inferenceMachine learningHEURISTICSsymbols.namesakeasiantuntijatMANAGEMENT0101 mathematicsGaussian processGaussian processCATCH LIMITSbusiness.industrybayesilainen menetelmä010604 marine biology & hydrobiologyUnivariateExpert elicitationOPINIONSupra BayesArtificial intelligenceHeuristicsbusinessFISHERIEScomputerBayesian Analysis
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The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild

2013

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License.-- et al.

0106 biological sciencesConservation geneticsMalegenotype phenotype correlationGorillaComputingMilieux_LEGALASPECTSOFCOMPUTINGarginineGenoma humà01 natural sciencesOculocutaneous albinism type 4single nucleotide polymorphismAlbinismegenetic variabilityGorillaInbreedinggenetic conservationGenetics0303 health sciencesGenomebiologyarticlecopy number variationHigh-Throughput Nucleotide SequencingSLC45A2 geneGenomicszygosityOculocutaneous albinismFloquet de neu (Goril·la)AlbinismFemaleBiotechnologyamino acid substitutionResearch ArticleSLC45A2Gorilla gorilla gorillaHeterozygoteAlbinismMolecular Sequence Datacomparative genomic hybridizationgene sequenceConservation010603 evolutionary biology03 medical and health sciencesWestern lowland gorillabiology.animalmedicineGeneticsheterozygosityAnimalsAmino Acid Sequencegene030304 developmental biologygene identificationWhole genome sequencingnonhumanGorilla gorillaMembrane Transport ProteinsSequence Analysis DNA15. Life on landbiology.organism_classificationmedicine.diseaseGenòmicaData_GENERALMutationbiology.proteinGenèticaoculocutaneous albinismglycineMicrosatellite RepeatsBMC Genomics
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Natural forest remnants as refugia for bryophyte diversity in a transformed mountain river valley landscape

2018

Riparian forests are among the most threatened ecosystem types worldwide. Their exploitation and replacement by coniferous plantations affects species pools and contributes to loss of biodiversity. We aimed to investigate bryophyte species pools within different habitat types in a transformed mountain river valley. We especially focused on the contribution of habitat types (relative to their proportional cover) to the species pool of the whole area. The study was conducted along the Czerwona Woda river - a model stream in the Stołowe Mountains National Park (SW Poland, study area: 91.2 ha) - and an example of coniferous plantations replacing natural broadleaved forest vegetation. Our study …

0106 biological sciencesConservation of Natural ResourcesEnvironmental Engineering010504 meteorology & atmospheric sciencesBiodiversityForests010603 evolutionary biology01 natural sciencesTreesRiversEnvironmental ChemistryRiparian forestEcosystemWaste Management and DisposalEcosystem0105 earth and related environmental sciencesgeographygeography.geographical_feature_categoryNational parkEcologySpecies diversityBiodiversityPollutionRefugiumHabitatThreatened speciesBryophytePolandScience of The Total Environment
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Ocean Acidification and the Loss of Phenolic Substances in Marine Plants

2012

Rising atmospheric CO(2) often triggers the production of plant phenolics, including many that serve as herbivore deterrents, digestion reducers, antimicrobials, or ultraviolet sunscreens. Such responses are predicted by popular models of plant defense, especially resource availability models which link carbon availability to phenolic biosynthesis. CO(2) availability is also increasing in the oceans, where anthropogenic emissions cause ocean acidification, decreasing seawater pH and shifting the carbonate system towards further CO(2) enrichment. Such conditions tend to increase seagrass productivity but may also increase rates of grazing on these marine plants. Here we show that high CO(2) …

0106 biological sciencesCymodocea nodosaved/biology.organism_classification_rank.speciesCarbonatesSecondary MetabolismMarine and Aquatic Scienceslcsh:MedicinePlant Science01 natural scienceschemistry.chemical_compoundGlobal Change Ecologylcsh:SciencePhysiological EcologyMultidisciplinaryAlismatalesbiologyEcologyEcologyPlant BiochemistryMarine EcologyOcean acidificationPotamogetonaceaeHydrogen-Ion ConcentrationSeagrassProductivity (ecology)ItalyCarbon dioxideCoastal EcologyResearch ArticleOceans and SeasMarine Biology010603 evolutionary biologyStatistics NonparametricHydrothermal VentsPhenolsPlant-Environment InteractionsTerrestrial plantSeawater14. Life underwaterocean acidification climate change mediterranean sea seagrassBiologyAnalysis of VarianceChemical EcologyMarylandved/biology010604 marine biology & hydrobiologyPlant Ecologyfungilcsh:R15. Life on landCarbon Dioxidebiology.organism_classificationSalinitychemistry13. Climate actionEarth Scienceslcsh:QRuppia maritima
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Effects of temperature on total phenolic compounds in Cystoseira amentacea (C. Agardh) Bory (Fucales, Phaeophyceae) from southern Mediterranean Sea

2015

The aim of this study was to test the effects of temperature on phenolic content of the brown seaweed Cystoseira amentacea. Phenolic compounds are secondary metabolites involved in different protection mechanisms as, for example, against grazers, epiphytes and UV radiation. Seasonal variations of phenolic content in C. amentacea were analysed and laboratory experiments, in which C. amentacea was exposed to an increase of temperature (25°C and 30°C), were performed. Total phenolic content (TPC) was determined colorimetrically with the Folin–Ciocalteu reagent. In C. amentacea, a seasonal pattern in TPC was observed, with a maximum value in winter-spring. C. amentacea responded significantly t…

0106 biological sciencesCystoseira amentacea Mediterranean Sea phenols secondary metabolites temperature variations010504 meteorology & atmospheric sciencesbiology010604 marine biology & hydrobiologySettore BIO/02 - Botanica SistematicaCystoseira amentaceaPlant Sciencebiology.organism_classification01 natural sciencesMediterranean seaBrown seaweedBotanySettore BIO/04 - Fisiologia VegetaleEpiphyteFucalesEcology Evolution Behavior and Systematics0105 earth and related environmental sciences
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Nested core collections maximizing genetic diversity in Arabidopsis thaliana.

2004

Summary The successful exploitation of natural genetic diversity requires a basic knowledge of the extent of the variation present in a species. To study natural variation in Arabidopsis thaliana, we defined nested core collections maximizing the diversity present among a worldwide set of 265 accessions. The core collections were generated based on DNA sequence data from a limited number of fragments evenly distributed in the genome and were shown to successfully capture the molecular diversity in other loci as well as the morphological diversity. The core collections are available to the scientific community and thus provide an important resource for the study of genetic variation and its …

0106 biological sciencesDNA PlantArabidopsisSingle-nucleotide polymorphismPlant Science01 natural sciencesGenomePolymorphism Single NucleotideDNA sequencing[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesArabidopsis[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsGenetic variationGeneticsArabidopsis thalianaComputingMilieux_MISCELLANEOUS030304 developmental biologyGenetic associationGenetics0303 health sciencesGenetic diversitybiologyGenetic VariationCell Biology15. Life on landbiology.organism_classificationPhenotypeEvolutionary biologyhuman activitiesGenome Plant010606 plant biology & botanyThe Plant journal : for cell and molecular biology
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