Search results for "assembly"

showing 10 items of 768 documents

Self-assembly of colloidal micelles in microfluidic channels.

2016

The self-assembly of amphiphilic Janus colloids in microfluidic channels is studied using hybrid molecular dynamics simulations with fully resolved hydrodynamic interactions incorporated through the multi-particle collision dynamics algorithm. The simulations are conducted at a density and temperature where the Janus particles spontaneously self-assemble into spherical micelles to minimize the interface between the solvophobic caps and the surrounding solvent. In confined systems, this contact area can also be reduced by aggregation at the channel walls. Indeed, a sizable fraction of free particles and small clusters with three and four members are found at the walls when the microfluidic c…

Aggregation numberChemistryJanus particlesNanotechnology02 engineering and technologyGeneral Chemistry010402 general chemistry021001 nanoscience & nanotechnologyCondensed Matter PhysicsHagen–Poiseuille equation01 natural sciencesMicelle0104 chemical sciencesMolecular dynamicsChemical physicsSelf-assemblyJanus0210 nano-technologySolvophobicSoft matter
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Surfactant self-assembling in gas phase: electrospray ionization- and matrix-assisted laser desorption/ionization-mass spectrometry of singly charged…

2005

The self-assembling of sodium bis (2-ethylhexyl) sulfosuccinate (AOT) in gas phase has been investigated by electrospray ionization- and matrix-assisted laser desorption/ionization mass spectrometry. Large surfactant clusters with an aggregation number close to that found in apolar media have been observed either as positive or negative ions. Moreover, the marked predominance of singly charged species as well as preliminary theoretical calculations strongly suggest an aggregate structure characterized by an internal hydrophilic core hosting the extra charge surrounded by an apolar shell constituted by the surfactant alkyl chains. This structure is similar to that of the more familiar revers…

Aggregation numberChemistrygas-phase self-assemblyElectrospray ionizationsurfactantESI-MS and ESI-MS/MSAnalytical chemistryMass spectrometryMicelleMALDI-MSIonMatrix-assisted laser desorption/ionizationPulmonary surfactantIonizationSpectroscopyJournal of mass spectrometry : JMS
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Assessment of determinants affecting the dual topology of hepadnaviral large envelope proteins

2004

For functional diversity, the large (L) envelope protein of hepatitis B virus (HBV) acquires a dual transmembrane topology via co-translational membrane integration of the S region and partial post-translational translocation of the preS subdomain. Because each process requires the second transmembrane segment (TM2), we explored the action of this determinant by using protease protection analysis of mutant L proteins. We demonstrated that neither the disruption of a leucine zipper-like motif by multiple alanine substitutions nor the flanking charges of TM2 affected the topological reorientation of L. The dispensability of both putative subunit interaction modules argues against a link betwe…

AlanineHepatitis B virusHepatitis B virusVirus AssemblyAmino Acid MotifsMolecular Sequence DataProtein domainPhenotype mixingBiological TransportBiologyEndoplasmic Reticulummedicine.disease_causeVirologyTransmembrane domainDual topologyAmino Acid SubstitutionViral Envelope ProteinsVirologyMembrane topologymedicineHepadnavirusAmino Acid SequenceProtein Processing Post-TranslationalJournal of General Virology
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Organized assemblies of magnetic clusters

2003

Abstract In this work we have explored the possibilities to create layered organizations of the Mn 12 single-molecule magnets using the Langmuir–Blodgett technique or attaching these clusters onto a metal surface by preparing self-assembled monolayers (SAMs). In the first part we discuss the use of the Langmuir–Blodgett (LB) technique in order to obtain organized magnetic films formed by monolayers of these clusters. Two strategies have been used with this aim. The first one consists of mixing Mn 12 acetate or benzoate derivatives with an amphiphile, while the second procedure is based on the use of Mn 12 derivatives specifically designed to form LB films. An alternative method is that of p…

Alternative methodsCrystallographyChemistryGeneral Chemical EngineeringAmphiphileMonolayerNanotechnologyMagnetic filmsSelf-assembled monolayerGeneral ChemistrySelf-assemblyMolecular materialsLangmuir–Blodgett filmComptes Rendus Chimie
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How self-assembly of amphiphilic molecules can generate complexity in the nanoscale

2015

Abstract Given the importance of nanomaterials and nanostructures in modern technology, in the past decades much effort has been directed to set up efficient bottom up protocols for the piloted self-assembly of molecules. However, molecules are generally disinclined to adopt the desired structural organization because they behave according to their own specific intermolecular interactions. Thus, only some selected classes of chemical compounds are capable to lead to useful self-assembled structures. Amphiphiles, simultaneously possessing polar and apolar moieties within their molecular architecture, can give a wide scenario of possible intermolecular interactions: polar–polar, polar–apolar,…

Amphiphilic moleculeNanostructureStructural organizationChemistryNanomachinesNanotechnologyTop-down and bottom-up designLiving cellComplexitySelf-assemblyNanodevicesNanomachinesSelf-assemblyComplexityNanotechnologyColloid and Surface ChemistryNanotechnologySelf-assemblyNanodevices
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Supramolecular Chemical Sensors Based on Pyrene Monomer-Excimer Dual Luminescence

2010

The past ten years have seen a spectacular development of chemical sensors based on the monomer-excimer dual luminescence of aromatic systems, such as pyrene. Either in the form of integrated or multicomponent molecular devices these chemosensors have been attracting a high interest above all because of their unique ratiometric properties. This review will focus on the latter systems, which can be classified into two classes: Firstly, the assembly of receptor-effector conjugates is triggerred by the analyte of interest. As a result, the sensor shows monomer to excimer fluorescence switching upon substrate binding. Secondly, the supramolecular assembly that constitutes the sensor is perturbe…

AnalytePyrenesOrganic ChemistryImidazolesOligonucleotidesSupramolecular chemistryNanotechnologyGeneral ChemistryExcimerBiochemistryFluorescenceSupramolecular assemblyDiphosphateschemistry.chemical_compoundMonomerchemistryPotassiumPyreneLuminescenceFluorescent Dyesgamma-CyclodextrinsChemistry - An Asian Journal
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ChemInform Abstract: Supramolecular Chemical Sensors Based on Pyrene Monomer-Excimer Dual Luminescence.

2011

The past ten years have seen a spectacular development of chemical sensors based on the monomer-excimer dual luminescence of aromatic systems, such as pyrene. Either in the form of integrated or multicomponent molecular devices these chemosensors have been attracting a high interest above all because of their unique ratiometric properties. This review will focus on the latter systems, which can be classified into two classes: Firstly, the assembly of receptor-effector conjugates is triggerred by the analyte of interest. As a result, the sensor shows monomer to excimer fluorescence switching upon substrate binding. Secondly, the supramolecular assembly that constitutes the sensor is perturbe…

Analytechemistry.chemical_compoundMonomerchemistrySupramolecular chemistryPyreneGeneral MedicineLuminescencePhotochemistryExcimerFluorescenceSupramolecular assemblyChemInform
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The Active Human Gut Microbiota Differs from the Total Microbiota

2011

The human gut microbiota is considered one of the most fascinating reservoirs of microbial diversity hosting between 400 to 1000 bacterial species distributed among nine phyla with Firmicutes, Bacteroidetes and Actinobacteria representing around of the diversity. One of the most intriguing issues relates to understanding which microbial groups are active players in the maintenance of the microbiota homeostasis. Here, we describe the diversity of active microbial fractions compared with the whole community from raw human fecal samples. We studied four healthy volunteers by 16S rDNA gene pyrosequencing. The fractions were obtained by cell sorting based on bacterial RNA concentration. Bacteria…

Anatomy and PhysiologyPolymerase Chain ReactionFecesRNA Ribosomal 16SMolecular Cell BiologyHomeostasisCommunity AssemblyIn Situ Hybridization FluorescenceMultidisciplinaryEcologybiologyQRBiodiversityGenomicsFlow CytometryBacterial Typing TechniquesRNA BacterialCommunity EcologyMedical MicrobiologyMedicineResearch ArticleAdultFirmicutesScienceSensitivity and SpecificityMicrobiologyMicrobial EcologyMicrobiologyActinobacteriaHumansMicrobiomeBiologyCommunity StructureBacteriaClostridialesBacteroidetesBacteriologySequence Analysis DNAComparative Genomicsbiology.organism_classificationGastrointestinal TractSpecies InteractionsMetagenomicsMetagenomePyrosequencingMetagenomicsPhysiological ProcessesCytometryBacteriaPLoS ONE
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Self-assembly of 3,5-bis(ethoxycarbonyl)pyrazolate anions and ammonium cations of β-phenylethylamine or homoveratrylamine into hetero-double-stranded…

2009

Hydrogen-bonded double-stranded hetero-helices are formed when reacting sodium 3,5-bis(ethoxycarbonyl)pyrazolate with beta-phenethylammonium or homoveratrylammonium chloride, in which one of the strands is defined by the ammonium cations and the other one by the pyrazolate anions.

AnionsCircular DichroismSodiumOrganic Chemistrychemistry.chemical_elementHydrogen BondingCrystallography X-RayBiochemistryChlorideProtein Structure SecondaryQuaternary Ammonium Compoundschemistry.chemical_compoundchemistryPhenethylaminesPolymer chemistrymedicineOrganic chemistryAmmoniumSelf-assemblyBeta-PhenylethylaminePhysical and Theoretical ChemistryDouble strandedmedicine.drugOrganic & Biomolecular Chemistry
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Ion-Pairing Effects in the Self-Assembly of a Fluorescent Pseudorotaxane

2006

Herein we report on the self-assembly, in a low polarity solvent, of a pseudorotaxane species comprising binaphthyl-26-crown-8 (BN26C8) as the macrocyclic host and anthracenyl-benzylammonium as the threadlike positively charged guest (ABH+). Absorption and luminescence data reveal a very efficient energy transfer process occurring from the binaphthyl to the anthracene singlet excited states. The self-assembly is highly dependent on the nature of the counteranion confirming the crucial role played by it in the competition between the self-assembly process and the formation of ion pairs (ABH+X-). This behavior can be readily evidenced in dilute solutions from the analysis of the luminescence …

AnthraceneIon pairsRotaxanesPhotochemistryStereochemistryOrganic ChemistrySupramolecular chemistrySelf-assemblychemistry.chemical_compoundCrystallographyTRISPHATMolecular recognitionchemistryHexafluorophosphateddc:540Proton NMRSinglet stateMolecular recognitionPhysical and Theoretical ChemistryLuminescenceEuropean Journal of Organic Chemistry
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