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showing 10 items of 10255 documents

Forecasting the volatility of biofuel feedstock prices: the US evidence

2019

Given that, nowadays, 40% of the US corn crop is used for biofuel production, there is a growing concern that the rise in biofuel production might lead to an increase in food prices. However, it is also obvious that significant growth in biofuel use has minimized the demand for fossil fuel and has hence reduced the volume of carbon emissions. It is therefore crucial to model corn market volatility precisely because such an estimate could play a vital role in stabilizing food and biofuel market prices. For this purpose, we consider using the information content of the corn implied volatility (CIV) index to predict the corn futures market return volatility. Using symmetric and asymmetric GARC…

0106 biological sciencesNatural resource economics020209 energyAutoregressive conditional heteroskedasticityFood pricesBioengineering02 engineering and technology01 natural scienceshintakehitysenergiamarkkinatraaka-aineetvolatiliteetti010608 biotechnologyGARCH-mallit0202 electrical engineering electronic engineering information engineeringEconomicsbiopolttoaineetta511Renewable Energy Sustainability and the Environmentcorn VIXennusteetBiofuel feedstockbioenergy cropBiofuelbiofuelCIV indexvolatility forecastVolatility (finance)Biofuels, Bioproducts and Biorefining
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The DNA barcoding of Mediterranean combtooth blennies suggests the paraphyly of some taxa (Perciformes, Blenniidae)

2019

A dataset including novel and publicly available mtDNA COI sequences of 14 Mediterranean combtooth blenny species belonging to nine genera was assembled in order to provide a reference dataset for DNA barcoding studies. Some inconsistencies in the current taxonomy of some genera were observed. In particular, the monophyly of the genera Parablennius and Salaria is not supported by the present dataset and the absence of reciprocal monophyly between the morphospecies Salaria basilisca and S. pavo questions their status and stresses the need of a revision of the genus Salaria.

0106 biological sciencesParaphylySalariaSalariaCombtooth blennyAquatic ScienceDNA Mitochondrial010603 evolutionary biology01 natural sciencesDNA barcodingbarcode of life database (BOLD)MonophylyGenusMediterranean SeaAnimalsDNA Barcoding TaxonomicparaphylyParablenniusautomatic barcode gap discovery (ABGD)PhylogenyEcology Evolution Behavior and SystematicsParablenniubiology010604 marine biology & hydrobiologybiology.organism_classificationEcology Evolution Behavior and SystematicPerciformesTaxonEvolutionary biologyTaxonomy (biology)Journal of Fish Biology
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Nuclear protein kinases: still enigmatic components in plant cell signalling

2010

International audience; Plants constantly face changing conditions in their environment. Unravelling the transduction mechanisms from signal perception at the plasma membrane level down to gene expression in the nucleus is a fascinating challenge. Protein phosphorylation, catalysed by protein kinases, is one of the major posttranslational modifications involved in the specificity, kinetic(s) and intensity of a signal transduction pathway. Although commonly assumed, the involvement of nuclear protein kinases in signal transduction is often poorly characterized. In particular, both their regulation and mode of action remain to be elucidated and may lead to the unveiling of new original mechan…

0106 biological sciencesPhysiologyp38 mitogen-activated protein kinasesPROTEIN KINASENUCLEAR TRANSLOCATIONPlant ScienceBiology01 natural sciencesSecond Messenger Systems03 medical and health sciencesNCK1Protein phosphorylationNuclear proteinNUCLEUS030304 developmental biologyPROTEIN (DE)PHOSPHORYLATION0303 health sciencesGRB10SIGNAL TRANSDUCTIONNuclear ProteinsAutophagy-related protein 13PlantsCell biology[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyBiochemistryCDC37Mitogen-activated protein kinasebiology.proteinProtein Kinases010606 plant biology & botany
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Identifying potential areas of expansion for the endangered brown bear (Ursus arctos) population in the cantabrian mountains (NW Spain)

2019

Many large carnivore populations are expanding into human-modified landscapes and the subsequent increase in coexistence between humans and large carnivores may intensify various types of conflicts. A proactive management approach is critical to successful mitigation of such conflicts. The Cantabrian Mountains in Northern Spain are home to the last remaining native brown bear (Ursus arctos) population of the Iberian Peninsula, which is also amongst the most severely threatened European populations, with an important core group residing in the province of Asturias. There are indications that this small population is demographically expanding its range. The identification of the potential are…

0106 biological sciencesRange (biology)Endangered speciesForests01 natural sciencesGeographical locationsPeninsulaGeoinformaticsUrsusCarnivoreConservation ScienceMammalseducation.field_of_studyMultidisciplinarygeography.geographical_feature_categoryEcologyGeographybiologyEcologyQREukaryotaTerrestrial EnvironmentsSpatial AutocorrelationCarnivoryTrophic InteractionsHabitatsEuropeCommunity EcologyHabitatVertebratesMedicineUrsidaeResearch ArticleComputer and Information SciencesSciencePopulationBears010603 evolutionary biologyEcosystemsPopulation MetricsAnimalsHumansEuropean Union14. Life underwatereducationEcosystemPopulation DensitygeographyPopulation Biology010604 marine biology & hydrobiologyEcology and Environmental SciencesOrganismsBiology and Life Sciences15. Life on landbiology.organism_classificationSpainAmniotesThreatened speciesEarth SciencesPeople and places
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Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium

2010

Abstract Background Synechocystis sp. PCC6803 is a cyanobacterium considered as a candidate photo-biological production platform - an attractive cell factory capable of using CO2 and light as carbon and energy source, respectively. In order to enable efficient use of metabolic potential of Synechocystis sp. PCC6803, it is of importance to develop tools for uncovering stoichiometric and regulatory principles in the Synechocystis metabolic network. Results We report the most comprehensive metabolic model of Synechocystis sp. PCC6803 available, iSyn669, which includes 882 reactions, associated with 669 genes, and 790 metabolites. The model includes a detailed biomass equation which encompasses…

0106 biological sciencesSystems biologyIn silicoMetabolic networkComputational biologyBiologyModels Biological01 natural sciencesMetabolic engineeringGene Knockout Techniques03 medical and health sciencesStructural BiologyModelling and Simulation010608 biotechnologyBotanyBiomassPhotosynthesislcsh:QH301-705.5Molecular Biology030304 developmental biologyAutotrophic Processes0303 health sciencesGene Expression ProfilingApplied MathematicsSynechocystisSynechocystisGenomicsDarknessbiology.organism_classificationComputer Science ApplicationsFlux balance analysislcsh:Biology (General)Genes BacterialAutotrophic ProcessesModeling and SimulationEnergy sourceGenome BacterialResearch ArticleBMC Systems Biology
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Measuring acoustic complexity in continuously varying signals: how complex is a wolf howl?

2017

Communicative complexity is a key behavioural and ecological indicator in the study of animal cognition. Much attention has been given to measures such as repertoire size and syntactic structure in both bird and mammal vocalizations, as large repertoires and complex call combinations may give an indication of the cognitive abilities both of the sender and receiver. However, many animals communicate using a continuous vocal signal that does not easily lend itself to be described by concepts such as ‘repertoire’. For example, dolphin whistles and wolf howls both have complex patterns of frequency modulation, so that no two howls or whistles are quite the same. Is there a sense in which some o…

0106 biological sciencescanidsEcologybusiness.industrycommunicationEntropy05 social sciencesLibrary science010603 evolutionary biology01 natural sciencesAutocorrelation0501 psychology and cognitive sciences050102 behavioral science & comparative psychologySociologyTelecommunicationsbusinesscomplexityComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and Systematics
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Fruit body based inventories in wood-inhabiting fungi: Should we replicate in space or time?

2016

We assessed the effect of survey design on the results when conducting fruit body surveys of wood-inhabiting fungi. Our results demonstrate that the optimal design depends on the ecological question to be addressed, as well as the group of fungal species under research. If the aim is to record the total species richness in a dead wood unit or to estimate the population size of a species, repeating the survey over time is generally necessary. However, if the aim is to estimate the total species richness in the forest or to assess how environmental covariates influence species richness or community composition, it is generally more efficient to increase the number of dead wood units than to r…

0106 biological sciencesdata collectiontemporal autocorrelationDead woodPlant ScienceBiologyspatial autocorrelation010603 evolutionary biology01 natural sciencesstudy designPolyporalesSpatial analysisEcology Evolution Behavior and SystematicsEcologysampling methodEcologyEcological ModelingPopulation sizeSurvey researchReplicate15. Life on landbiology.organism_classificationwood-decaying fungiCommunity compositionpolyporalesta1181Species richnessfungal community010606 plant biology & botanyFungal Ecology
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The influence of temperature model assumptions on the prognosis accuracy of extinction risk

2000

Abstract For a species whose abundance is well-known to correlate on the degree of heat different temperature model assumptions may affect the prognosis accuracy of persistence. Likewise, year-to-year autocorrelations in weather fluctuations are known to decrease extinction risk. Thus, we investigated the grey bush cricket Platycleis albopunctata . For this species is known that growth and reproduction is mainly influenced by temperature. We developed a stochastic individual based model for the bush cricket. This day–degree model described the demographic growth of the species that depends on temperature. Daily temperatures were generated by five different methods: (i) temperatures were seq…

0106 biological scienceseducation.field_of_studyExtinction010504 meteorology & atmospheric sciencesStochastic modellingEcologyEcological ModelingPopulationAutocorrelation010603 evolutionary biology01 natural sciencesDegree (temperature)Normal distribution13. Climate actionMinimum viable populationAbundance (ecology)Statisticseducation0105 earth and related environmental sciencesMathematicsEcological Modelling
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Epiphytic bacteria make an important contribution to heterotrophic bacterial production in a humic boreal lake

2017

Bacterial production (BP) in lakes has generally only been measured in the pelagic zone without accounting for littoral BP, and studies of BP at the whole-lake scale are very scarce. In the dystrophic humic lakes, which are common throughout the boreal region, low light penetration through water has been assumed to seriously limit available habitats for littoral organisms. However, many highly humic boreal lakes have extensive partly submerged vegetation around the lake perimeter which can provide well-lit substrata for highly productive epiphyton. We measured epiphytic BP on the littoral vegetation and pelagic BP in a small highly humic boreal lake in Finland during an open-water season an…

0106 biological sciencesepiphytesperiphytonta1172Heterotrophenvironment and nature studiesAquatic Science010603 evolutionary biology01 natural sciencesjärvetperifytonbakteeritpäällyskasvitBotanylakescarbon cycleLittoral zoneAutotrophPeriphytonbacteriaaineenvaihduntaEcology Evolution Behavior and SystematicsEcology010604 marine biology & hydrobiologyhiilen kiertoPelagic zonepelagicboreaalinen vyöhykeBoreallittoralautotrophicympäristö- ja luonnontietoEpiphytic bacteriaEnvironmental sciencemetabolismheterotrophicAquatic Microbial Ecology
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Utilization of lignin powder for manufacturing self-binding HDF

2017

Abstract The preparation of self-binding lignocellulosic fibreboards has been investigated. Different high-density fibreboards (HDF) were hot-pressed based on a mixture of grey alder (Alnus incana L. Moench) wood chips processed by steam explosion auto-hydrolysis (SE) and 15% or 25% lignin content from three different industrial sources: softwood kraft lignin (SWKL), soda wheat straw lignin (SoWhStL) and hydrolysis wheat straw lignin (HWhStL). Density, thickness swelling (TS) after immersion in water for 24 h, modulus of rupture (MOR), modulus of elasticity (MOE) and strength of internal bond (IB) of the board samples were determined. The amount (15% or 25%) and moisture content (MC) (18±1%…

0106 biological sciencesgrey alderMaterials scienceSoftwoodself-binding fibreboards02 engineering and technology01 natural sciencesBiomaterialssteam explosion auto-hydrolysischemistry.chemical_compoundHydrolysisindustrial lignins010608 biotechnologymedicineLigninComposite materialWater contentSteam explosionAlnus incanabiologyStraw021001 nanoscience & nanotechnologybiology.organism_classificationPulp and paper industrychemistrySwellingmedicine.symptom0210 nano-technologyHolzforschung
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