Search results for "bacteria."

showing 10 items of 4757 documents

Relationships between Staphylococcus aureus genetic background, virulence factors, agr groups (alleles), and human disease

2002

ABSTRACT The expression of most Staphylococcus aureus virulence factors is controlled by the agr locus, which encodes a two-component signaling pathway whose activating ligand is an agr -encoded autoinducing peptide (AIP). A polymorphism in the amino acid sequence of the AIP and of its corresponding receptor divides S. aureus strains into four major groups. Within a given group, each strain produces a peptide that can activate the agr response in the other member strains, whereas the AIPs belonging to different groups are usually mutually inhibitory. We investigated a possible relationship between agr groups and human S. aureus disease by studying 198 S. aureus strains isolated from 14 asym…

[SDE] Environmental SciencesStaphylococcus aureus[SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT][SDV]Life Sciences [q-bio]Bacterial ToxinsImmunologyVirulenceLocus (genetics)Biologymedicine.disease_causeMicrobiologylaw.inventionMicrobiology03 medical and health sciencesBacterial ProteinslawPhylogeneticsmedicineHumansAllelePeptide sequenceComputingMilieux_MISCELLANEOUSAllelesPhylogenyPolymerase chain reaction030304 developmental biologyGenetics0303 health sciencesVirulence030306 microbiologyBacterial InfectionsStaphylococcal Infectionsbiochemical phenomena metabolism and nutritionbacterial infections and mycoses[SDV] Life Sciences [q-bio]Infectious DiseasesPOUVOIR PATHOGENEStaphylococcus aureus[SDE]Environmental SciencesTrans-ActivatorsbacteriaFemaleParasitologyAmplified fragment length polymorphismSignal Transduction
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Influence of type III bacterial secretion system on the interactions between plant and non pathogenic fluorescent Pseudomonads spp.

2010

No abstract

[SDE] Environmental Sciences[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyInteractions plantes-microorganismes bénéfiques[SDV] Life Sciences [q-bio]Système de sécrétion de type IIIChampignons mycorhizogènes à arbusculesMycorrhiza helper bacteria (MHB)Medicago truncatula[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologytheseRELATION PLANTE-MICROORGANISMESYSTEME DE SECRETIONPseudomonas spp. fluorescents
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Microbial Community Structure and Density Under Different Tree Species in an Acid Forest Soil (Morvan, France)

2005

Overexploitation of forests to increase wood production has led to the replacement of native forest by large areas of monospecific tree plantations. In the present study, the effects of different monospecific tree cover plantations on density and composition of the indigenous soil microbial community are described. The experimental site of "Breuil-Chenue" in the Morvan (France) was the site of a comparison of a similar mineral soil under Norway spruce (Picea abies), Douglas fir (Pseudotuga menziesii), oak (Quercus sessiflora), and native forest [mixed stand dominated by oak and beech (Fagus sylvatica)]. Sampling was performed during winter (February) at three depths (0-5, 5-10, and 10-15 cm…

[SDE] Environmental Sciences[SDV]Life Sciences [q-bio]Ribosomal Intergenic Spacer analysisSoil ScienceCHENE SESSILEStratification (vegetation)TreesDOUGLASSoilSpecies SpecificityFagus sylvaticaDNA Ribosomal SpacerHETRE COMMUNBiomassBeechSoil MicrobiologyEcology Evolution Behavior and SystematicsPrincipal Component AnalysisEPICEA COMMUNBiomass (ecology)BacteriaEcologybiologyEcologyFungiGenetic VariationPicea abiesForestryBiodiversitybiology.organism_classificationQUERCUS SESSIFLORACarbonFagaceae[SDV] Life Sciences [q-bio]Microbial population biology[SDE]Environmental SciencesFranceGENETIQUE DES POPULATIONSMicrobial Ecology
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Mapping field-scale spatial distribution patterns of size and activity of the denitrifier community

2008

International audience

[SDE] Environmental Sciencesabundancenitrous-oxidephvariability[SDV]Life Sciences [q-bio]quantificationdiversity[SDV] Life Sciences [q-bio][SDE]Environmental Sciencessoil denitrificationbacteriareal-time pcrmicrobial biogeographyComputingMilieux_MISCELLANEOUS
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Phylogenetic comparison of symbiotic (nodC and nifH) and 16S rRNA genes in strains of Rhizobium, Mesorhizobium and Bradyrhizobium isolated from Astra…

2000

Various studies reported different conclusions on the phylogenetic relationship between symbiotic (nod and nif) and chromosomal (16S rRNA) genes in rhizobia (Haukka et al, 1998). Some studies suggested that the phylogeny of nod genes could be related with the host plant (Ueda et al., 1995). In a previous study, rhizobia (44 isolates) from Astragalus, Oxytropis and Onobrychis pp have been classified into 14 distinct 16S rRNA gene types independently of their host plant and geographic origin. The majority of isolates were classified within the genus Mesorhizobium, and few within Rhizobium and Bradyrhizobium genera (Laguerre et al., 1997). The aim of the present study was to determine the dive…

[SDE] Environmental SciencesbiologyPhylogenetic treeARN RIBOSOMAL[SDV]Life Sciences [q-bio]Mesorhizobiumfood and beveragesbiochemical phenomena metabolism and nutrition16S ribosomal RNAbiology.organism_classificationBradyrhizobiumRhizobia[SDV] Life Sciences [q-bio]OnobrychisPhylogeneticsBotany[SDE]Environmental SciencesbacteriaRhizobium
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Loss in microbial diversity affects nitrogen cycling in soil

2013

International audience; Microbial communities have a central role in ecosystem processes by driving the Earth's biogeochemical cycles. However, the importance of microbial diversity for ecosystem functioning is still debated. Here, we experimentally manipulated the soil microbial community using a dilution approach to analyze the functional consequences of diversity loss. A trait-centered approach was embraced using the denitrifiers as model guild due to their role in nitrogen cycling, a major ecosystem service. How various diversity metrics related to richness, eveness and phylogenetic diversity of the soil denitrifier community were affected by the removal experiment was assessed by 454 s…

[SDE] Environmental Sciencesdénitrification[SDV]Life Sciences [q-bio]Biodiversitybiodiversitécycle de l'azotenitrogen cycling[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyPhylogenySoil Microbiology2. Zero hunger0303 health sciencesEcology04 agricultural and veterinary sciencesBiodiversityrespiratory systemNitrogen Cyclefunctional redundancy[SDV] Life Sciences [q-bio]ecosystem functioning[SDE]Environmental SciencesDenitrificationTerrestrial ecosystemOriginal ArticleOxidoreductases[SDU.STU]Sciences of the Universe [physics]/Earth Sciencesfonctionnement des écosystèmesBiologyMicrobiologysoil03 medical and health sciencesMicrobial ecologyProteobacteria[SDV.BV]Life Sciences [q-bio]/Vegetal Biologyredondance fonctionnelleEcosystemNitrogen cycleEcology Evolution Behavior and Systematics030304 developmental biologyBacteria15. Life on landModels TheoreticalArchaeaBacterial LoadPhylogenetic diversityMicrobial population biology040103 agronomy & agriculture0401 agriculture forestry and fisheriesSpecies richnesshuman activities
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Strategies for analyzing interactions between arbuscular mycorrhiza and bacteria

2013

National audience

[SDE] Environmental Sciencesinteraction bactérie-champignonmycorhize à arbusculearbuscular mycorrhiza[SDV]Life Sciences [q-bio]écologie[SDV] Life Sciences [q-bio]T3SS[SDE]Environmental Sciences[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyecologyrhizosphererhizosphèreComputingMilieux_MISCELLANEOUSbacterial-fungal interaction
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New perspectives and approaches in plant growth-promoting rhizobacteria research

2007

International audience; In the context of increasing international concern for food and environmental quality, use of Plant Growth-Promoting Rhizobacteria (PGPR) for reducing chemical inputs in agriculture is a potentially important issue. PGPR are root-colonizing bacteria that exert beneficial effects on plant growth and development, but they can be also employed in the control of plant pathogens, for enhancing the efficiency of fertilizers, and for degrading xenobiotic compounds. This book provides an update by renowned international experts on the most recent advances in the ecology of these important bacteria, the application of innovative methodologies for their study, their interactio…

[SDE] Environmental Sciencesplant growth-promoting rhizobacteriaCONTROL OF PLANT PATHOGENSPLANT GROWTH AND DEVELOPMENTcontrol of plants pathogens[SDV]Life Sciences [q-bio]fungieducationfood and beveragesplant growthROOT-COLONIZING BACTERIAINTERACTION WITH THE HOST PLANT[SDV] Life Sciences [q-bio]PLANT GROWTH-PROMOTING RHIZOBACTERIA(PHPPR)[SDE]Environmental SciencesEFFICIENCY OF FERTILIZERSplant developmentRELATION PLANTE-MICROORGANISMEPOTENTIAL APPLICATION IN AGRICULTUREapplication in agriculture
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Inactivation of PadR, the repressor of the phenolic acid stress response, by molecular interaction with Usp1, a universal stress protein from Lactoba…

2009

ABSTRACT The phenolic acid decarboxylase gene padA is involved in the phenolic acid stress response (PASR) in gram-positive bacteria. In Lactobacillus plantarum , the padR gene encodes the negative transcriptional regulator of padA and is cotranscribed with a downstream gene, usp1 , which encodes a putative universal stress protein (USP), Usp1, of unknown function. The usp1 gene is overexpressed during the PASR. However, the role and the mechanism of action of the USPs are unknown in gram-positive bacteria. Therefore, to gain insights into the role of USPs in the PASR; (i) a usp1 deletion mutant was constructed; (ii) the two genes padR and usp1 were coexpressed with padA under its own promo…

[SDV.BIO]Life Sciences [q-bio]/BiotechnologyCarboxy-LyasesMolecular Sequence DataRepressorGenetics and Molecular Biologymedicine.disease_causeApplied Microbiology and Biotechnology03 medical and health scienceschemistry.chemical_compoundBacterial ProteinsHydroxybenzoatesTranscriptional regulationmedicineEscherichia coliAmino Acid SequenceGene SilencingGeneEscherichia coliHeat-Shock Proteins030304 developmental biologyRegulation of gene expression0303 health sciencesReporter geneEcologybiology030306 microbiologyGene Expression Regulation BacterialPhenolic acidbiology.organism_classificationMolecular biologyEnterobacteriaceaeacide phénolique[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologychemistryBiochemistryMutationSequence AlignmentHeat-Shock ResponseLactobacillus plantarumFood ScienceBiotechnologyexpression des gènes
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Biotechnological applications of the sepiolite interactions with bacteria: Bacterial transformation and DNA extraction

2020

International audience; Among the various clay minerals, sepiolite, which is a natural nanofibrous silicate that exhibit a poor cell toxicity, is a potential promising nanocarrier for the non-viral and stable transfer of plasmid DNA into bacteria, mammalian and human cells. We first show here that sepiolite binds to bacteria, which can be useful in decontamination protocols. In a previous research we have shown that is possible to modulate the efficiency of the absorption of different types of DNA molecules onto sepiolite, and that the DNA previously adsorbed could be recovered preserving the DNA structure and biological activity. Taking advantage of both, the sepiolite/bacteria and sepioli…

[SDV.BIO]Life Sciences [q-bio]/Biotechnology[SDV]Life Sciences [q-bio]Sepiolite020101 civil engineering02 engineering and technology[SDV.BBM.BM] Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology0201 civil engineeringchemistry.chemical_compoundAdsorptionPlasmidPlasmid extractionGeochemistry and Petrology[CHIM]Chemical SciencesComputingMilieux_MISCELLANEOUSBacterial transformation[PHYS]Physics [physics]Bionanohybrids[CHIM.MATE] Chemical Sciences/Material chemistrybiologyChemistrySepioliteGeology[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyDNA[CHIM.MATE]Chemical Sciences/Material chemistry021001 nanoscience & nanotechnologybiology.organism_classificationNanomaterialCombinatorial chemistryDNA extraction[SDV.BIO] Life Sciences [q-bio]/BiotechnologySepiolite Bionanohybrids Nanomaterial DNA Bacterial transformation Plasmid extractionNanocarriers0210 nano-technologyBacteriaDNATransformation efficiency
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