Search results for "basis"

showing 10 items of 760 documents

Molecular precursors of mesostructured silica materials in the atrane route: A DFT/GIAO/NBO theoretical study

2007

Abstract Quantum chemical calculations using density functional theory have been carried out to investigate two assumed molecular precursors and identified as silatranes (N[OCH2CH2]3Si–OCH2CH2N–(CH2CH2OH)2 and N[OCH2CH2]3Si–OCH2CH2N–(CH2CH2OH)2Na+) which are present in the synthesis of mesoporous silica based material namely “the atrane route”. One of the ways in this synthesis leads to the well-known MCM-41. Additionally, in this work has been also investigated two others molecules such as triethanolamine (TEAH3) and sodatrane which are present in the medium. Gas phase and solution equilibrium geometries of the previous molecules were fully optimized at B3LYP level, modeling solvent effect…

Chemical shiftCondensed Matter PhysicsBiochemistrychemistry.chemical_compoundSolvation shellAtranechemistryComputational chemistryMoleculeDensity functional theoryPhysical and Theoretical ChemistrySolvent effectsBasis setNatural bond orbitalJournal of Molecular Structure: THEOCHEM
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Assessment of the Potential Energy Hypersurfaces in Thymine within Multiconfigurational Theory: CASSCF vs. CASPT2

2016

The present study provides new insights into the topography of the potential energy hypersurfaces (PEHs) of the thymine nucleobase in order to rationalize its main ultrafast photochemical decay paths by employing two methodologies based on the complete active space self-consistent field (CASSCF) and the complete active space second-order perturbation theory (CASPT2) methods: (i) CASSCF optimized structures and energies corrected with the CASPT2 method at the CASSCF geometries and (ii) CASPT2 optimized geometries and energies. A direct comparison between these strategies is drawn, yielding qualitatively similar results within a static framework. A number of analyses are performed to assess t…

Chemistry Multidisciplinary2-DIMENSIONAL ELECTRONIC SPECTROSCOPYPharmaceutical Sciencephotostability0305 Organic Chemistry01 natural sciencesLOWEST TRIPLET-STATEAnalytical ChemistryInterpretation (model theory)Molecular dynamicschemistry.chemical_compoundComputational chemistryDrug DiscoveryComplete active spacePerturbation theoryRETINAL CHROMOPHORE MODELComputingMilieux_MISCELLANEOUSAB-INITIOphotochemistry010304 chemical physicsBasis (linear algebra)ChemistryCOUPLED-CLUSTER METHODSPhotochemical ProcessesPotential energy[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryChemistryChemistry (miscellaneous)2ND-ORDER PERTURBATION-THEORYPhysical SciencesANO BASIS-SETSCASSCF/CASPT2Molecular MedicineThermodynamicsLife Sciences & BiomedicineBiochemistry & Molecular BiologyField (physics)INITIO MOLECULAR-DYNAMICSMolecular Dynamics Simulation010402 general chemistryMolecular physicsArticlelcsh:QD241-441lcsh:Organic chemistryCASSCF/CASPT2; photochemistry; DNA; thymine; photostability0103 physical sciencesthyminePhysical and Theoretical ChemistryULTRAFAST INTERNAL-CONVERSIONScience & TechnologyOrganic ChemistryDNAEXCITED-STATE DYNAMICS0104 chemical sciencesThymineModels ChemicalMolecules; Volume 21; Issue 12; Pages: 1666
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Ab initio calculations on the molecular structure of fluorocyanopolyynes

1998

Abstract The molecular structure of the first three members of the fluorocyanopolyynes was studied by ab initio Hartree-Fock calculations with a polarized double zeta basis set and at MP2 level with the same basis set. Alternating triple and single bonds were found; a theoretical estimate of rotational constants and dipole moments was performed and a comparison with the available experimental data was made. An analysis of the theoretical vibrational frequencies of the title compounds was carried out.

ChemistryAb initioCondensed Matter PhysicsBiochemistryMolecular physicsDipoleAb initio quantum chemistry methodsPhysics::Atomic and Molecular ClustersSingle bondMoleculeRotational spectroscopyPhysics::Chemical PhysicsPhysical and Theoretical ChemistryAtomic physicsSIESTA (computer program)Basis setJournal of Molecular Structure: THEOCHEM
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An ab initio CI study on the rotational barrier of the allyl anion

1986

All-electron and pseudopotential non-empirical calculations have been performed on C 2v and C s (syn, anti) allyl anion conformations. Using a double-zeta valence-shell basis set within the Epstein-Nesbet definition of the unperturbed Hamiltonian, a value about 19 kcal/mol is found for the barrier to rotation of the allyl anion. This value is the theoretical value obtained with greater accuracy, and the lowest one for the rotational barrier.

ChemistryAb initioConfiguration interactionRotational barrierIonPseudopotentialsymbols.namesakeCrystallographyComputational chemistryPhysics::Atomic and Molecular ClusterssymbolsChiropracticsPhysics::Chemical PhysicsPhysical and Theoretical ChemistryHamiltonian (quantum mechanics)Basis setCarbanionTheoretica Chimica Acta
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Experimental Investigations and Ab Initio Studies of Tellurium(II) Dithiolates, Te(SR)2

1999

The reaction between Te(O(i)Pr)(4) and HSR offers a new and effective route to tellurium dithiolates, Te(SR)(2). Te(S(i)Pr)(2) (1) and Te(S(t)Bu)(2) (2) are stable compounds whereas Te(SPh)(2) (3) slowly decomposes at room temperature to give Te and Ph(2)S(2). IR spectra of 1-3 and ab initio calculations (HF/3-21G(d) and MP2 with double-zeta polarization effective core potential basis set) show nu(as)(Te-S) and nu(s)(Te-S) to be around 340 and 380 cm(-)(1), respectively. UV spectra exhibit similar lambda(max) (346-348 nm) for all three compounds, with the greater extinction coefficient of 3 accounting for its different and more intense color. Analysis of the molecular orbitals of the model …

ChemistryAb initiochemistry.chemical_elementInfrared spectroscopyMolar absorptivityInorganic ChemistryAb initio quantum chemistry methodsComputational chemistryPhysical chemistryMolecular orbitalIrradiationPhysical and Theoretical ChemistryTelluriumBasis setInorganic Chemistry
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A Comparative Analysis of the Electrophilicity of Organic Molecules between the Computed IPs and EAs and the HOMO and LUMO energies

2007

[EN] The electrophilicity index, omega, of a series of substituted ethylenes used in some relevant organic reactions has been evaluated from the ionization potential JP) and the electron affinity (EA) computed by vertical ionization at the B3LYP/aug-cc-PVTZ level. The corresponding electrophilicity values are well correlated with those obtained from the HOMO and LUMO energies of the neutral molecules. The good linear correlation found between omega(I,A) and omega(H,L)(LBS), and between omega(H,L)(LBS) and omega(H,L)(SBS) allows to confirm the use of the easily available B3LYP/6-31G(*) HOMO and LUMO energies to obtain reasonable values of the global electrophilicity index of organic molecule…

ChemistryBasis-SetsReactivityGeneral Physics and AstronomyScalesOrganic reactionDensity-Functional TheoryComputational chemistryHardnessIonizationElectron affinityElectrophileComputationMoleculeElectron-AffinitiesDensity functional theoryQuantitative characterizationPhysical and Theoretical ChemistryIonization energyHOMO/LUMO
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Analytic calculation of the diagonal Born-Oppenheimer correction within configuration-interaction and coupled-cluster theory

2006

Schemes for the analytic calculation of the diagonal Born-Oppenheimer correction (DBOC) are formulated and implemented for use with general single-reference configuration-interaction and coupled-cluster wave function models. Calculations are reported to demonstrate the convergence of the DBOC with respect to electron-correlation treatment and basis set as well as to investigate the size-consistency error in configuration-interaction calculations of the DBOC. The importance of electron-correlation contributions to the DBOC is illustrated in the computation of the corresponding corrections for the reaction energy and activation barrier of the F + H2 --FH + H reaction as well as of the atomiza…

ChemistryComputationDiagonalBorn–Oppenheimer approximationGeneral Physics and AstronomyConfiguration interactionsymbols.namesakeCoupled clusterQuantum electrodynamicsConvergence (routing)symbolsPhysical and Theoretical ChemistryAtomic physicsWave functionBasis setThe Journal of Chemical Physics
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A mutliconfigurational study of low-lying electronic states of KO

1992

Abstract Potential energy curves and spectroscopic parameters of several electronic states of the KO molecule have been calculated using multi-configurational methods. The KO B 2Π state, first time theoretically described, presents a strong avoided crossing with the A 2Π state, and allows for the explanation of the observed fluorescence of the KO molecule. Eleven electronic states have been studied at all the internuclear distances. Effects of complete active space and basis set selections on the results are also analyzed.

ChemistryComputational chemistryAvoided crossingGeneral Physics and AstronomyComplete active spacePhysical and Theoretical ChemistryConfiguration interactionAtomic physicsPotential energyDiatomic moleculeBasis setMolecular electronic transitionDoublet stateChemical Physics
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GIAO/DFT calculated chemical shifts of tautomeric species. 2-Phenacylpyridines and (Z)-2-(2-hydroxy-2-phenylvinyl)pyridines

2001

1H, 13C and 15N NMR chemical shifts for 28 substituted 2-phenacylpyridines (ketimine forms) and their enolimine tautomers, (Z)-2-(2-hydroxy-2-phenylvinyl)pyridines, were calculated via the GIAO/DFT approach. Among four tested methods at the B3LYP level of theory, the 6–311G, 6–311++G and 6–311G** basis sets gave acceptable result for 13C NMR chemical shifts whereas the 6–311++G** basis set was the minimum needed for reproduction of 15N NMR chemical shifts. Satisfactory reproduction of 13C and 15N NMR chemical shifts for different tautomers revealed that intramolecular hydrogen bonding could be modeled reliably by these calculations when the geometry optimizations were done with the HF/3–21G…

ChemistryComputational chemistryHydrogen bondChemical shiftIntramolecular forceGeneral Materials ScienceGeneral ChemistryCarbon-13 NMRTautomerBasis setMagnetic Resonance in Chemistry
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Full configuration interaction calculation of BeH adiabatic states.

2008

An all-electron full configuration interaction (FCI) calculation of the adiabatic potential energy curves of some of the lower states of BeH molecule is presented. A moderately large ANO basis set of atomic natural orbitals (ANO) augmented with Rydberg functions has been used in order to describe the valence and Rydberg states and their interactions. The Rydberg set of ANOs has been placed on the Be at all bond distances. So, the basis set can be described as 4s3p2d1f3s2p1d(BeH)+4s4p2d(Be). The dipole moments of several states and transition dipole strengths from the ground state are also reported as a function of the R(Be-H) distance. The position and the number of states involved in sever…

ChemistryConfiguration interactionsGeneral Physics and AstronomyBond lengthsBeryllium compounds ; Bond lengths ; Configuration interactions ; Ground states ; Molecular moments ; Potential energy surfaces ; Rydberg states ; Vibrational statesRydberg statesPotential energyFull configuration interactionGround statesUNESCO::FÍSICA::Química físicaDipolesymbols.namesakeAtomic orbitalBeryllium compoundsPotential energy surfacesRydberg formulasymbolsMolecular momentsVibrational statesPhysical and Theoretical ChemistryAtomic physicsGround stateAdiabatic process:FÍSICA::Química física [UNESCO]Basis setThe Journal of chemical physics
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