Search results for "bayesian"

Ranking drivers of global carbon and energy fluxes over land

2015

The accurate estimation of carbon and heat fluxes at global scale is paramount for future policy decisions in the context of global climate change. This paper analyzes the relative relevance of potential remote sensing and meteorological drivers of global carbon and energy fluxes over land. The study is done in an indirect way via upscaling both Gross Primary Production (GPP) and latent energy (LE) using Gaussian Process regression (GPR). In summary, GPR is successfully compared to multivariate linear regression (RMSE gain of +4.17% in GPP and +7.63% in LE) and kernel ridge regression (+2.91% in GPP and +3.07% in LE). The best GP models are then studied in terms of explanatory power based o…

Bayesian joint models for longitudinal and survival data

2020

This paper takes a quick look at Bayesian joint models (BJM) for longitudinal and survival data. A general formulation for BJM is examined in terms of the sampling distribution of the longitudinal and survival processes, the conditional distribution of the random effects and the prior distribution. Next a basic BJM defined in terms of a mixed linear model and a Cox survival regression models is discussed and some extensions and other Bayesian topics are briefly outlined.

Bayesian network based pathway analysis of microarray data

2011

A Bayesian direction-of-arrival model for an undetermined number of sources using a two-microphone array.

2014

Sound source localization using a two-microphone array is an active area of research, with considerable potential for use with video conferencing, mobile devices, and robotics. Based on the observed time-differences of arrival between sound signals, a probability distribution of the location of the sources is considered to estimate the actual source positions. However, these algorithms assume a given number of sound sources. This paper describes an updated research account on the solution presented in Escolano et al. [J. Acoust. Am. Soc. 132(3), 1257-1260 (2012)], where nested sampling is used to explore a probability distribution of the source position using a Laplacian mixture model, whic…

Graph Topology Learning and Signal Recovery Via Bayesian Inference

2019

The estimation of a meaningful affinity graph has become a crucial task for representation of data, since the underlying structure is not readily available in many applications. In this paper, a topology inference framework, called Bayesian Topology Learning, is proposed to estimate the underlying graph topology from a given set of noisy measurements of signals. It is assumed that the graph signals are generated from Gaussian Markov Random Field processes. First, using a factor analysis model, the noisy measured data is represented in a latent space and its posterior probability density function is found. Thereafter, by utilizing the minimum mean square error estimator and the Expectation M…

Weighted-average least squares (WALS): A survey

2016

Model averaging has become a popular method of estimation, following increasing evidence that model selection and estimation should be treated as one joint procedure. Weighted-average least squares (WALS) is a recent model-average approach, which takes an intermediate position between frequentist and Bayesian methods, allows a credible treatment of ignorance, and is extremely fast to compute. We review the theory of WALS and discuss extensions and applications.

Bayesian Model Averaging and Weighted Average Least Squares: Equivariance, Stability, and Numerical Issues

2011

This article is concerned with the estimation of linear regression models with uncertainty about the choice of the explanatory variables. We introduce the Stata commands bma and wals which implement, respectively, the exact Bayesian Model Averaging (BMA) estimator and the Weighted Average Least Squares (WALS) estimator developed by Magnus et al. (2010). Unlike standard pretest estimators which are based on some preliminary diagnostic test, these model averaging estimators provide a coherent way of making inference on the regression parameters of interest by taking into account the uncertainty due to both the estimation and the model selection steps. Special emphasis is given to a number pra…

Epidemiology of Multiple Sclerosis en France

2012

In Europe, France is located between high and low risk areas of Multiple Sclerosis (MS). We estimated the national prevalence of MS in France on 31st October 2004 and the incidence between 2000 and 2007 based on data from the ‘Caisse Nationale d’Assurance Maladie des Travailleurs Salariés’ which insures 87% of the population. MS like other chronic diseases is one of the 30 long-term illnesses (Affections de Longue Durée, ALD). We analysed geographic variations in the prevalence and incidence of MS in France using the Bayesian approach.Total MS prevalence in France standardised for age was 94.7 per 100,000; 130.5 in women; 54.8 in men. The notification rate for MS (2000-2007) after age-stand…

Importance sampling type estimators based on approximate marginal Markov chain Monte Carlo

2020

We consider importance sampling (IS) type weighted estimators based on Markov chain Monte Carlo (MCMC) targeting an approximate marginal of the target distribution. In the context of Bayesian latent variable models, the MCMC typically operates on the hyperparameters, and the subsequent weighting may be based on IS or sequential Monte Carlo (SMC), but allows for multilevel techniques as well. The IS approach provides a natural alternative to delayed acceptance (DA) pseudo-marginal/particle MCMC, and has many advantages over DA, including a straightforward parallelisation and additional flexibility in MCMC implementation. We detail minimal conditions which ensure strong consistency of the sug…

Influence Functions and Efficiencies of k-Step Hettmansperger–Randles Estimators for Multivariate Location and Regression

2016

In Hettmansperger and Randles (Biometrika 89:851–860, 2002) spatial sign vectors were used to derive simultaneous estimators of multivariate location and shape. Oja (Multivariate nonparametric methods with R. Springer, New York, 2010) proposed a similar approach for the multivariate linear regression case. These estimators are highly robust and have under general assumptions a joint limiting multinormal distribution. The estimates are easy to compute using fixed-point algorithms. There are however no exact proofs for the convergence of these algorithms. The existence and uniqueness of the solutions also still remain unproven although we believe that they hold under general conditions. To ci…