Search results for "benthic"

showing 10 items of 350 documents

Modulation of metallothionein and metal partitioning in liver and kidney of Solea senegalensis after long-term acclimation to two environmental tempe…

2014

9 pages, 3 figures, 5 tables

MolarAcclimatizationchemistry.chemical_elementBioconcentrationKidneyBiochemistryAcclimatizationMetalSeleniummedicineAnimalsMetallothioneinInductively coupled plasma mass spectrometryBenthic fishGeneral Environmental ScienceKidneyTemperaturesChemistryTemperaturemedicine.anatomical_structureLiverMetalsvisual_artEnvironmental chemistryFlatfishesvisual_art.visual_art_mediumMetallothioneinFood AnalysisSeleniumEnvironmental Research 132: 197-205 (2014)
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An extended Benthic Quality Index for assessment of lake profundal macroinvertebrates: addition of indicator taxa by multivariate ordination and weig…

2014

AbstractThe chironomid Benthic Quality Index (BQI) is a widely used metric in assessments of lake status. The BQI is based on 7 indicator taxa, which like most profundal fauna, often occur sporadically in low densities. Hence, a major weakness of the index is that it cannot be calculated when indicator taxa are not captured. Thus, an extension of the BQI that incorporates more macroinvertebrate taxa is desirable. We used 2 statistical approaches (Detrended Correspondence Analysis and Weighted Averaging) to estimate new benthic quality indicator scores for profundal macroinvertebrate taxa and to construct modified BQIs called Profundal Invertebrate Community Metrics (PICMs). We calibrated th…

Multivariate statisticsEcologyEcologyFaunaAquatic ScienceBiologyDetrended correspondence analysisBenthic zoneIndicator speciesta1181Profundal zoneOrdinationPhysical geographyEcology Evolution Behavior and SystematicsInvertebrateFreshwater Science
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Vertical structure of bi-layered microbial mats from Byers Peninsula, Maritime Antarctica

2013

AbstractA summer study of the vertical structure of bi-layered microbial mats was carried out on Byers Peninsula (Livingston Island, South Shetland Islands). These benthic communities had a common basic structure that consisted of two distinct layers differing in composition, morphology and colour. Our sampling focused on mats showing more layering, which thrived over moist soils and at the bottom of ponds. The photosynthetic pigments analysis performed by high-performance liquid chromatography demonstrated a major occurrence of cyanobacteria and diatoms on these mats, the former being more abundant in relative terms on the surface and composed by morphospecies grouping into orders Oscillat…

NostocalesBiomass (ecology)Chlorophyll aGeologyScytoneminBiologyOceanographybiology.organism_classificationchemistry.chemical_compoundchemistryBenthic zoneBotanyOscillatorialesMicrobial matChroococcalesEcology Evolution Behavior and SystematicsAntarctic Science
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Subfossil chironomid assemblages in deep, stratified European lakes: relationships with temperature, trophic state and oxygen

2010

Summary 1. The distributions of subfossil remains of chironomid larvae in 28 large, deep and stratified lakes in Europe were examined in surface sediments along a latitudinal transect ranging from northern Sweden to southern Italy. 2. Canonical correspondence analysis (CCA) showed that summer surface water and July air temperature, as well as total phosphorus (TP) concentrations, hypolimnetic oxygen availability and conductivity were statistically significant (P < 0.05) explanatory variables explaining between 11 and 14% of the variance in the chironomid data. 3. Owing to the spatial scale covered by our study, many environmental variables were covarying. Temperature, TP concentration and o…

NutrientSubfossilBenthic zoneEcologyEnvironmental scienceProfundal zonePhysical geographyAquatic ScienceHypolimnionSurface waterTrophic levelDetrended correspondence analysisFreshwater Biology
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Classification and retrieval on macroinvertebrate image databases

2011

Aquatic ecosystems are continuously threatened by a growing number of human induced changes. Macroinvertebrate biomonitoring is particularly efficient in pinpointing the cause-effect structure between slow and subtle changes and their detrimental consequences in aquatic ecosystems. The greatest obstacle to implementing efficient biomonitoring is currently the cost-intensive human expert taxonomic identification of samples. While there is evidence that automated recognition techniques can match human taxa identification accuracy at greatly reduced costs, so far the development of automated identification techniques for aquatic organisms has been minimal. In this paper, we focus on advancing …

NymphAquatic OrganismsInsectaDatabases FactualComputer scienceBayesian probabilityta1172Health InformaticsMachine learningcomputer.software_genreData retrievalRiversSupport Vector MachinesImage Processing Computer-AssistedAnimalsMultilayer perceptronsEcosystemta113Network architectureBenthic macroinvertebrateta112Artificial neural networkta213business.industryBayesian networkBayes TheoremPerceptronClassificationRadial basis function networksComputer Science ApplicationsSupport vector machineBiomonitoringBayesian NetworksData miningArtificial intelligenceNeural Networks ComputerbusinesscomputerClassifier (UML)AlgorithmsEnvironmental MonitoringComputers in Biology and Medicine
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Seawater carbonate chemistry and shell mineralogy, microstructure, and mechanical strength of four Mediterranean gastropod species near a CO2 seep

2017

Marine CO2 seeps allow the study of the long-term effects of elevated pCO2 (ocean acidification) on marine invertebrate biomineralization. We investigated the effects of ocean acidification on shell composition and structure in four ecologically important species of Mediterranean gastropods (two limpets, a top-shell snail, and a whelk). Individuals were sampled from three sites near a volcanic CO2 seep off Vulcano Island, Italy. The three sites represented ambient (8.15 pH), moderate (8.03 pH) and low (7.73 pH) seawater mean pH. Shell mineralogy, microstructure, and mechanical strength were examined in all four species. We found that the calcite/aragonite ratio could vary and increased sign…

Ocean Acidification International Coordination Centre (OA-ICC)IdentificationRegistration number of speciesSalinityTemperateinorganicAlkalinityExperimentTemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateAlkalinity totalSalinity standard errorPatella caeruleatotalCO2 ventpHCalciteTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)standard errorEarth System ResearchField observationUniform resource locator link to referencePotentiometric titrationCalcite saturation stateLengthLocationPotentiometricwaterGrowth MorphologyHexaplex trunculusAlkalinity total standard errorBenthosUniform resource locator/link to referenceOsilinus turbinatusOther studied parameter or processMediterranean SeaOcean Acidification International Coordination Centre OA ICCAnimaliaBicarbonate ionTypeTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)ForceSpeciespH standard errorCalculated using CO2SYSCarbonate system computation flagFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonElasticityTreatmentAragonite saturation state standard errorPartial pressure of carbon dioxide water at sea surface temperature wet airAragoniteCarbon dioxideMolluscaGrowth/MorphologySingle speciesBenthic animalsFugacity of carbon dioxide water at sea surface temperature wet airPatella rusticaToughnessCoast and continental shelf
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Physiological advantages of dwarfing in surviving extinctions in high-CO2 oceans

2015

Excessive CO2 in the present-day ocean-atmosphere system is causing ocean acidification, and is likely to cause a severe biodiversity decline in the future, mirroring effects in many past mass extinctions. Fossil records demonstrate that organisms surviving such events were often smaller than those before, a phenomenon called the Lilliput effect. Here, we show that two gastropod species adapted to acidified seawater at shallow-water CO2 seeps were smaller than those found in normal pH conditions and had higher mass-specific energy consumption but significantly lower whole-animal metabolic energy demand. These physiological changes allowed the animals to maintain calcification and to partial…

Ocean Acidification International Coordination Centre (OA-ICC)IdentificationSalinityTemperateBicarbonate ion standard deviationBottles or small containers/Aquaria (<20 L)Alkalinity total standard deviationinorganicAlkalinityExperimentTemperature waterCarbon inorganic dissolvedWidthCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateRespiration rate oxygenAlkalinity totalBottles or small containers Aquaria 20 LtotalCO2 ventpHRespirationCalcification rate of calcium carbonateTemperatureMonthdissolvedCarbonate ionLaboratory experimentPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Temperature water standard deviationRespiration rateEarth System ResearchField observationstandard deviationThicknessCalcification/DissolutionPotentiometric titrationCalcite saturation statePotentiometricwaterPartial pressure of carbon dioxideSiteGrowth MorphologyFigureAragonite saturation state standard deviationBenthosMediterranean SeaOcean Acidification International Coordination Centre OA ICCCalcite saturation state standard deviationAnimaliaBicarbonate ionLONGITUDECalculated using seacarb after Nisumaa et al. (2010)SpeciesCyclope neriteaBottles or small containers/Aquaria (&lt;20 L)Calculated using CO2SYSHeightPartial pressure of carbon dioxide standard deviationCarbonate system computation flagpH standard deviationCarbonate ion standard deviationFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonHeight/width ratioTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideMolluscaGrowth/MorphologySingle speciesCalcification DissolutionLATITUDEHeight width ratioBenthic animalsFugacity of carbon dioxide water at sea surface temperature wet airCoast and continental shelfNassarius corniculusoxygenTable
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The impact of ocean acidification and warming on the skeletal mechanical properties of the sea urchin Paracentrotus lividus from laboratory and field…

2016

Increased atmospheric CO2 concentration is leading to changes in the carbonate chemistry and the temperature of the ocean. The impact of these processes on marine organisms will depend on their ability to cope with those changes, particularly the maintenance of calcium carbonate structures. Both a laboratory experiment (long-term exposure to decreased pH and increased temperature) and collections of individuals from natural environments characterized by low pH levels (individuals from intertidal pools and around a CO2 seep) were here coupled to comprehensively study the impact of near-future conditions of pH and temperature on the mechanical properties of the skeleton of the euechinoid sea …

Ocean Acidification International Coordination Centre (OA-ICC)IdentificationSalinityTemperateinorganicAlkalinityAreaExperimentTemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateMesocosm or benthocosmAlkalinity totaltotalYoung s moduluspHNorth AtlanticTemperatureProportiondissolvedCarbonate ionLaboratory experimentPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Earth System ResearchField observationThicknessEchinodermataCalcite saturation stateLengthwaterYoung's modulusGrowth MorphologyBenthosReplicateDiameterHardnessOther studied parameter or processOcean Acidification International Coordination Centre OA ICCAnimaliaBicarbonate ionCalculated using seacarb after Nisumaa et al. (2010)ForceSpeciesHeightTest setCarbonate system computation flagFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideParacentrotus lividusGrowth/MorphologySingle speciesBenthic animalsFugacity of carbon dioxide water at sea surface temperature wet airCoast and continental shelfSecond moment of area
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Seawater carbonate chemistry and kelp densities and coral coverages at three study locations and photosynthesis and calcification of corals measured …

2021

Ocean warming is altering the biogeographical distribution of marine organisms. In the tropics, rising sea surface temperatures are restructuring coral reef communities with sensitive species being lost. At the biogeographical divide between temperate and tropical communities, warming is causing macroalgal forest loss and the spread of tropical corals, fishes and other species, termed “tropicalization”. A lack of field research into the combined effects of warming and ocean acidification means there is a gap in our ability to understand and plan for changes in coastal ecosystems. Here, we focus on the tropicalization trajectory of temperate marine ecosystems becoming coral-dominated systems…

Ocean Acidification International Coordination Centre (OA-ICC)Net calcification rate of calcium carbonate lightCommunity composition and diversityAlkalinity total standard deviationunique identificationTemperature waterCarbon inorganic dissolvedNet calcification rate of calcium carbonateCalculated using seacarb after Nisumaa et al 2010Color descriptionRespiration rate oxygenpHRespirationMonthCarbonate ionLaboratory experimentField experimentRespiration rateunique identification URIstandard deviationlightAcropora solitaryensisCalcification/DissolutionCalcite saturation statewaterPartial pressure of carbon dioxideSiteGrowth MorphologyRocky-shore communityAragonite saturation state standard deviationPorites heronensisCarbon inorganic dissolved standard deviationTypeCalculated using seacarb after Nisumaa et al. (2010)Primary production PhotosynthesisSpeciesBottles or small containers/Aquaria (&lt;20 L)fungiEvent labeltechnology industry and agricultureCarbonate system computation flagpH standard deviationbiochemical phenomena metabolism and nutritionFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonPartial pressure of carbon dioxide water at sea surface temperature wet airEntire communitySingle speciesCalcification DissolutionBenthic animalsFugacity of carbon dioxide water at sea surface temperature wet airCoralCoast and continental shelfPhotosynthetic efficiencySpecies unique identification (URI)darkIdentificationRegistration number of speciesSalinityTemperateBottles or small containers/Aquaria (<20 L)inorganicAlkalinityArea localityNet photosynthesis rate oxygenExperimentArea/localityAragonite saturation stateNorth PacificAlkalinity totalBottles or small containers Aquaria 20 LtotalCO2 ventCalcification rate of calcium carbonateTemperaturedissolvedPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Temperature water standard deviationNet photosynthesis rateEarth System ResearchNet calcification rate of calcium carbonate darkField observationgeographic locationsSpecies unique identificationBenthosCnidariaDiameterOcean Acidification International Coordination Centre OA ICCAnimaliaBicarbonate ionGrowth ratePartial pressure of carbon dioxide standard deviationPrimary production/PhotosynthesisTreatmentCarbon dioxideGrowth/MorphologyRocky shore communityShootsoxygen
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Insights fromsodium into the impacts of elevated pCO2 and temperature on bivalve shell formation

2017

Ocean acidification and warming are predicted to affect the ability of marine bivalves to build their shells, but little is known about the underlying mechanisms. Shell formation is an extremely complex process requiring a detailed understanding of biomineralization processes. Sodium incorporation into the shells would increase if bivalves rely on the exchange of Na+/H+ to maintain homeostasis for shell formation, thereby shedding new light on the acid-base and ionic regulation at the calcifying front. Here, we investigated the combined effects of seawater pH (8.1, 7.7 and 7.4) and temperature (16 and 22 °C) on the growth and sodium composition of the shells of the blue mussel, Mytilus edul…

Ocean Acidification International Coordination Centre (OA-ICC)Registration number of speciesSalinityTemperateMytilus edulisinorganicAlkalinityGrowth rate standard deviationSodium/Calcium ratioExperimentPatinopecten yessoensisTemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateNorth PacificAlkalinity totalSalinity standard errortotalSodium Calcium ratiopHTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedCarbonate ionLaboratory experimentPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)standard errorContainers and aquaria 20 1000 L or 1 m 2Earth System ResearchContainers and aquaria (20-1000 L or &lt; 1 m**2)standard deviationUniform resource locator link to referenceCalcification/DissolutionPotentiometric titrationCalcite saturation statewaterGrowth MorphologyContainers and aquaria (20-1000 L or < 1 m**2)Alkalinity total standard errorBenthosUniform resource locator/link to referenceOcean Acidification International Coordination Centre OA ICCAnimaliaBicarbonate ionTypeTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)SpeciespH standard errorGrowth rateCalculated using CO2SYSEvent labelCarbonate system computation flagFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideMolluscaGrowth/MorphologySingle speciesCalcification DissolutionBenthic animalsFugacity of carbon dioxide water at sea surface temperature wet airCoast and continental shelf
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