Search results for "bioinformatics"
showing 10 items of 1632 documents
Management of Patients With Aortic Dissection
2008
Cardiovascular diseases have become the leading cause of death in countries with high medical standards. Acute aortic syndromes—particularly acute aortic dissection—are playing an increasingly important part in this development (1). Acute aortic dissection has an extremely high mortality rate after the occurrence of an initial manifestation, so a standardized treatment algorithm is crucial for patient survival. On the basis of selected recent publications, the aim of this study was to review the current status of the management of aortic dissection and formulate recommendations for treatment.
Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
2006
A large-scale sequencing analysis of the Hemiptera Acyrthosiphon pisumexpressed sequence tags corresponding to about 12,000 unique transcripts is described, along with an in silico profiling analysis that identifies 135 aphid tissue-specific transcripts.
Anaplastic Thyroid Carcinoma: A ceRNA Analysis Pointed to a Crosstalk between SOX2, TP53, and microRNA Biogenesis.
2014
It has been suggested that cancer stem cells (CSC) may play a central role in oncogenesis, especially in undifferentiated tumours. Anaplastic thyroid carcinoma (ATC) has characteristics suggestive of a tumour enriched in CSC. Previous studies suggested that the stem cell factorSOX2has a preeminent hierarchical role in determining the characteristics of stem cells in SW1736 ATC cell line. In detail, silencing SOX2 in SW1736 is able to suppress the expression of the stem markers analysed, strongly sensitizing the line to treatment with chemotherapeutic agents. Therefore, in order to further investigate the role of SOX2 in ATC, a competing endogenous RNA (ceRNA) analysis was conducted in order…
Adaptive Continuous Feature Binarization for Tsetlin Machines Applied to Forecasting Dengue Incidences in the Philippines
2020
The Tsetlin Machine (TM) is a recent interpretable machine learning algorithm that requires relatively modest computational power, yet attains competitive accuracy in several benchmarks. TMs are inherently binary; however, many machine learning problems are continuous. While binarization of continuous data through brute-force thresholding has yielded promising accuracy, such an approach is computationally expensive and hinders extrapolation. In this paper, we address these limitations by standardizing features to support scale shifts in the transition from training data to real-world operation, typical for e.g. forecasting. For scalability, we employ sampling to reduce the number of binariz…
Intrusion Detection with Interpretable Rules Generated Using the Tsetlin Machine
2020
The rapid deployment in information and communication technologies and internet-based services have made anomaly based network intrusion detection ever so important for safeguarding systems from novel attack vectors. To this date, various machine learning mechanisms have been considered to build intrusion detection systems. However, achieving an acceptable level of classification accuracy while preserving the interpretability of the classification has always been a challenge. In this paper, we propose an efficient anomaly based intrusion detection mechanism based on the Tsetlin Machine (TM). We have evaluated the proposed mechanism over the Knowledge Discovery and Data Mining 1999 (KDD’99) …
The Effects of Probiotics and Prebiotics on Gastrointestinal and Behavioural Symptoms in Autism Spectrum Disorder
2021
Background: Autism Spectrum Disorders (ASDs) are a group of prevalent neuropsychiatric disorders. They present a complex and unknown etiology, which in most cases includes significant peripheral alterations outside the brain such as in the composition of gut microbiota. Because the gut microbiota is involved in modulating the gut-brain axis, several studies have suggested that the microbiome in the gut can modify metabolites which are able to cross the blood-brain barrier and modulate brain function. Methods: We reviewed the current evidence regarding microbiota alterations in patients with ASD and the effects of the administration of probiotics and prebiotics in these patients, both in te…
The clinical and molecular spectrum of QRICH1 associated neurodevelopmental disorder
2022
De novo variants in QRICH1 (Glutamine-rich protein 1) has recently been reported in 11 individuals with intellectual disability. The function of QRICH1 is largely unknown but it is likely to play a key role in the unfolded response of endoplasmic reticulum (ER) stress through transcriptional control of proteostasis. In this study, we present 27 additional individuals and delineate the clinical and molecular spectrum of the individuals (n=38) with QRICH1 variants. The main clinical features were mild to moderate developmental delay/intellectual disability (71%), non-specific facial dysmorphism (92%) and hypotonia (39%). Additional findings included poor weight gain (29%), short stature (29%)…
Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer
2019
Este es el artículo que se ha publicado de forma definitiva en: https://molecularautism.biomedcentral.com/articles/10.1186/s13229-019-0262-8 En este artículo también participa Joan Climent, Vera Pancaldi, Lourdes Fañanás, Celso Arango, Mara Parellada, Anaïs Baudot, Daniel Vogt, John L. Rubenstein, Alfonso Valencia y Rafael Tabarés-Seisdedos. Background: Epidemiological and clinical evidence points to cancer as a comorbidity in people with autism spectrum disorders (ASD). A significant overlap of genes and biological processes between both diseases has also been reported. Methods: Here, for the first time, we compared the gene expression profiles of ASD frontal cortex tissues and 22 cancer t…
Ozone and autologous therapies [abstract]
2019
PURPOSE: One of the proven effects of Ozone Therapy, is the releasing of Growth Factors from Platelets. Some other therapies can have similar effects. Autologous Therapies can be defined as “The therapy that is done by transferring cells, tissues, body liquids originating from the recipient rather than from donor.” The purpose of this presentation is to give information on those therapies.
 
 DISCUSSION: There are several therapies in this group, such as Stem Cell Therapies, Dentric Cell Vaccine Therapy, Autologous immune enhancement therapy, etc. But most of them are so difficult that we can not practise at office conditions where some therapies can be done at small clinic and pr…
4,4-Di-fluoro-2,3;5,6-bis-(tetra-methylene)-4-bora-3a,4a-di-aza-s-indacene (LD540).
2014
The title compound, C18H21BF2N2, is a lipophilic dye based on a BODIPY fluorophore backbone, which was developed for microscopic imaging of lipid droplets; the molecule has a planar BODIPY core [dihedral angle between the pyrrole rings = 2.3 (3)°] and two tetramethylene substituents at the 2,3- and 5,6-positions in a half-chair conformation. One of the tetramethylene substituents is disordered over two two sets of sites with site occupancies of 0.5. In the crystal, pairs of C—H...F interactions link the molecules into inversion dimers. Neighbouring dimers are linked by further C—H...F interactions, forming an infinite array. C—H...π and π–π [centroid–centroid distance = 4.360 (3) Å] interac…