Search results for "biophysic"

showing 10 items of 3565 documents

Heat- and pH-induced BSA conformational changes, hydrogel formation and application as 3D cell scaffold

2016

Aggregation and gelation of globular proteins can be an advantage to generate new forms of nanoscale biomaterials based on the fibrillar architecture. Here, we report results obtained by exploiting the proteins' natural tendency to self-organize in 3D network, for the production of new material based on BSA for medical application. In particular, at five different pH values the conformational and structural changes of the BSA during all the steps of the thermal aggregation and gelation have been analyzed by FTIR spectroscopy. The macroscopic mechanical properties of these hydrogels have been obtained by rheological measurements. The microscopic structure of the gels have been studied by AFM…

0301 basic medicineScaffoldHot TemperatureNanostructureBSACell SurvivalProtein ConformationGlobular proteinBiophysics?-aggregatesBiocompatible Materials02 engineering and technologymacromolecular substancesMicroscopy Atomic ForceBiochemistryMice03 medical and health sciencesProtein structureRheologySpectroscopy Fourier Transform Infraredβ-aggregateAnimalsCell-scaffoldFourier transform infrared spectroscopyMolecular BiologyNanoscopic scalechemistry.chemical_classificationTissue ScaffoldsChemistrySerum Albumin BovineHydrogelsHydrogen-Ion Concentration021001 nanoscience & nanotechnologySettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)NanostructuresHydrogelCrystallography030104 developmental biologyMechanical spectraBiophysicChemical engineeringFTIRSelf-healing hydrogelsMicroscopy Electron ScanningCattleStress MechanicalRheology0210 nano-technology
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The development of a tissue-engineered tracheobronchial epithelial model using a bilayered collagen-hyaluronate scaffold

2016

Today, chronic respiratory disease is one of the leading causes of mortality globally. Epithelial dysfunction can play a central role in its pathophysiology. The development of physiologically-representative in vitro model systems using tissue-engineered constructs might improve our understanding of epithelial tissue and disease. This study sought to engineer a bilayered collagen-hyaluronate (CHyA-B) scaffold for the development of a physiologically-representative 3D in vitro tracheobronchial epithelial co-culture model. CHyA-B scaffolds were fabricated by integrating a thin film top-layer into a porous sub-layer with lyophilisation. The film layer firmly connected to the sub-layer with del…

0301 basic medicineScaffoldMaterials scienceCellular differentiationBiophysicsBronchiBioengineering02 engineering and technologyEpitheliumCell LineBiomaterials03 medical and health scienceschemistry.chemical_compoundTissue engineeringHyaluronic acidmedicineHumansHyaluronic AcidTissue EngineeringTissue ScaffoldsTight junctionMucinCell DifferentiationEpithelial CellsFibroblasts021001 nanoscience & nanotechnologyCoculture TechniquesEpitheliumCell biologyTrachea030104 developmental biologymedicine.anatomical_structurechemistryMechanics of MaterialsDrug deliveryCeramics and CompositesFeasibility StudiesCollagen0210 nano-technologyBiomedical engineeringBiomaterials
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Salmon fibrinogen and chitosan scaffold for tissue engineering: in vitro and in vivo evaluation

2018

3D fibrous scaffolds have received much recent attention in regenerative medicine. Use of fibrous scaffolds has shown promising results in tissue engineering and wound healing. Here we report the development and properties of a novel fibrous scaffold that is useful for promoting wound healing. A scaffold made of salmon fibrinogen and chitosan is produced by electrospinning, resulting in a biocompatible material mimicking the structure of the native extracellular matrix (ECM) with suitable biochemical and mechanical properties. The scaffold is produced without the need for enzymes, in particular thrombin, but is fully compatible with their addition if needed. Human dermal fibroblasts culture…

0301 basic medicineScaffoldMaterials scienceSurface PropertiesTissue Engineering Constructs and Cell SubstratesBiomedical EngineeringBiophysicsBiocompatible MaterialsBioengineering02 engineering and technologyRegenerative medicineBiomaterialsChitosanExtracellular matrix03 medical and health scienceschemistry.chemical_compound3D cell cultureThrombinTissue engineeringSalmonmedicineAnimalsHumansCell ProliferationChitosanWound HealingTissue EngineeringTissue Scaffoldsintegumentary systemFibrinogenElectrochemical TechniquesFibroblasts021001 nanoscience & nanotechnologyRats3. Good health030104 developmental biologychemistry0210 nano-technologyWound healingBiomedical engineeringmedicine.drugJournal of Materials Science: Materials in Medicine
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Large strain stimulation promotes extracellular matrix production and stiffness in an elastomeric scaffold model

2016

Mechanical conditioning of engineered tissue constructs is widely recognized as one of the most relevant methods to enhance tissue accretion and microstructure, leading to improved mechanical behaviors. The understanding of the underlying mechanisms remains rather limited, restricting the development of in silico models of these phenomena, and the translation of engineered tissues into clinical application. In the present study, we examined the role of large strip-biaxial strains (up to 50%) on ECM synthesis by vascular smooth muscle cells (VSMCs) micro-integrated into electrospun polyester urethane urea (PEUU) constructs over the course of 3 weeks. Experimental results indicated that VSMC …

0301 basic medicineScaffoldVascular smooth muscleMaterials scienceIn silico0206 medical engineeringMyocytes Smooth MuscleBiomedical Engineering02 engineering and technologyECM (extracellular matrix)ArticleMuscle Smooth VascularBiomaterialsExtracellular matrix03 medical and health sciencesTissue engineeringmedicineAnimalsMechanical conditioningCells CulturedTissue EngineeringTissue ScaffoldsRational designStiffnessModels Theoretical020601 biomedical engineeringBiomaterialElasticityExtracellular MatrixPolyesterElastomeric scaffold030104 developmental biologyElastomersRats Inbred LewMechanics of MaterialsBiophysicsCollagenStress Mechanicalmedicine.symptomMechanical propertieBiomedical engineering
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Resistance against Echinostoma caproni (Trematoda) secondary infections in mice is not dependent on the ileal protein production

2016

Echinostoma caproni (Trematoda: Echinostomatidae) is an intestinal trematode, which has been widely employed to investigate the factors determining the rejection of intestinal helminths. Protein production patterns of intestinal epithelial cells are related to the infection-induced changes that determine the course of E. caproni infections. Herein, we compare the protein production profiles in the ileum of four experimental groups of mice: control; infected; dewormed and reinfected. Worm burdens were significantly lower in secondary infections, confirming the generation of partial resistance to homologous secondary infections in mice. However, quantitative comparison by 2D-DIGE showed that …

0301 basic medicineSecondary infection030231 tropical medicineBiophysicsIleumBiochemistryMass SpectrometryMice03 medical and health sciences0302 clinical medicineIleumEchinostomaProtein biosynthesismedicineAnimalsHelminthsTissue homeostasisCell ProliferationDisease ResistanceEchinostomiasisCell DeathbiologyCoinfectionEpithelial Cellsbiology.organism_classificationPraziquantel030104 developmental biologymedicine.anatomical_structureProtein BiosynthesisImmunologyTrematodaEchinostomamedicine.drugJournal of Proteomics
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Differential proteomics reveals age-dependent liver oxidative costs of innate immune activation in mice

2016

Abstract Individual response to an immune challenge results from the optimization of a trade-off between benefits and costs of immune cell activation. Age-related immune disorders may have several mechanistic bases, from immune cell defects to chronic pro-inflammatory status and oxidative imbalance, but we are still lacking experimental data showing the relative importance of each of these mechanisms. Using a proteomic approach and subsequent biochemical validations of proteomics-derived hypotheses, we found age-dependent regulations in the liver of 3-months and 1-year old-mice in response to an acute innate immune activation. Old mice presented a chronic up-regulation of several proteins i…

0301 basic medicineSenescenceMaleProteomicsAgingImmunosenescenceBiophysicsBiologyProteomicsmedicine.disease_causeBiochemistry[ SDE ] Environmental Sciences03 medical and health sciencesMice0302 clinical medicineImmune systemmedicineAnimalsOrganismInnate immune systemImmunosenescenceImmunity Innate3. Good healthAgeing030104 developmental biologyLiverAgeingOxidative stressImmunology[SDE]Environmental SciencesOxidation-Reduction030217 neurology & neurosurgeryOxidative stress
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Super-resolution binding activated localization microscopy through reversible change of DNA conformation

2018

ABSTRACT Methods of super-resolving light microscopy (SRM) have found an exponentially growing range of applications in cell biology, including nuclear structure analyses. Recent developments have proven that Single Molecule Localization Microscopy (SMLM), a type of SRM, is particularly useful for enhanced spatial analysis of the cell nucleus due to its highest resolving capability combined with very specific fluorescent labeling. In this commentary we offer a brief review of the latest methodological development in the field of SMLM of chromatin designated DNA Structure Fluctuation Assisted Binding Activated Localization Microscopy (abbreviated as fBALM) as well as its potential future app…

0301 basic medicineSingle molecule localization03 medical and health scienceschemistry.chemical_compound0302 clinical medicinesuper-resolution microscopyMicroscopyfBALMmedicineSMLMsingle molecule localizationCell NucleusBinding SitesSuper-resolution microscopyExtra ViewnucleusDNACell BiologySuperresolutionSingle Molecule ImagingChromatinfBALM SMLMCell nucleus030104 developmental biologymedicine.anatomical_structurechemistry030220 oncology & carcinogenesisBiophysicschromatinNucleic Acid ConformationNucleusDNANucleus
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Pressure effects on α-synuclein amyloid fibrils: An experimental investigation on their dissociation and reversible nature

2017

α–synuclein amyloid fibrils are found in surviving neurons of Parkinson's disease affected patients, but the role they play in the disease development is still under debate. A growing number of evidences points to soluble oligomers as the major cytotoxic species, while insoluble fibrillar aggregates could even play a protection role. In this work, we investigate α–synuclein fibrils dissociation induced at high pressure by means of Small Angle X-ray Scattering and Fourier Transform Infrared Spectroscopy. Fibrils were produced from wild type α–synuclein and two familial mutants, A30P and A53T. Our results enlighten the different reversible nature of α–synuclein fibrils fragmentati…

0301 basic medicineSmall AngleAmyloidHigh-pressureMutantBiophysicsmacromolecular substances010402 general chemistryFibril01 natural sciencesBiochemistryDissociation (chemistry)Scattering03 medical and health scienceschemistry.chemical_compoundX-Ray DiffractionScattering Small AngleSpectroscopy Fourier Transform InfraredPressureHumansPoint MutationFourier transform infrared spectroscopyMolecular BiologySpectroscopyAlpha-synucleinAmyloid; FTIR; High-pressure; SAXS; α-synuclein; Amyloid; Humans; Parkinson Disease; Point Mutation; Pressure; Scattering Small Angle; Solubility; Spectroscopy Fourier Transform Infrared; X-Ray Diffraction; alpha-Synuclein; Biophysics; Biochemistry; Molecular BiologySmall-angle X-ray scatteringWild typeα-synucleinParkinson DiseaseSAXSAmyloid fibril0104 chemical sciences?-synucleinCrystallography030104 developmental biologyBiophysicchemistryFTIRSolubilityFourier Transform InfraredBiophysicsalpha-SynucleinHuman
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Assembly of Spinach Chloroplast ATP Synthase Rotor Ring Protein-Lipid Complex

2019

Rotor ATPases are large multisubunit membrane protein complexes found in all kingdoms of life. The membrane parts of these ATPases include a ring-like assembly, so-called c-ring, consisting of several subunits c, plugged by a patch of phospholipids. In this report, we use a nature-inspired approach to model the assembly of the spinach (Spinacia oleracea) c14 ring protein-lipid complex, where partially assembled oligomers are pulled toward each other using a biasing potential. The resulting assemblies contain 23 to 26 encapsulated plug lipids, general position of which corresponds well to experimental maps. However, best fit to experimental data is achieved with 15 to 17 lipids inside the c-…

0301 basic medicineSpinaciaATPaseProtein subunitlipiditBiochemistry Genetics and Molecular Biology (miscellaneous)Biochemistrysolukalvotprotein-lipid interactions03 medical and health sciences0302 clinical medicinecomplex assemblymembrane insertionMolecular Biosciencesmembrane proteinProtein–lipid interactionlcsh:QH301-705.5Molecular BiologyOriginal ResearchbiologyATP synthaseannular lipidsChemistrybiology.organism_classificationadenosiinitrifosfaatti030104 developmental biologyMembranelcsh:Biology (General)Membrane proteinProtein-lipid complex030220 oncology & carcinogenesisbiology.proteinBiophysicslipids (amino acids peptides and proteins)proteiinitFrontiers in Molecular Biosciences
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Multiple steady states and the form of response functions to antigen in a model for the initiation of T cell activation

2017

The aim of this paper is to study the qualitative behaviour predicted by a mathematical model for the initial stage of T-cell activation. The state variables in the model are the concentrations of phosphorylation states of the T-cell receptor (TCR) complex and the phosphatase SHP-1 in the cell. It is shown that these quantities cannot approach zero and that the model possesses more than one positive steady state for certain values of the parameters. It can also exhibit damped oscillations. It is proved that the chemical concentration which represents the degree of activation of the cell, that of the maximally phosphorylated form of the TCR complex, is, in general, a non-monotone function of…

0301 basic medicineState variable1004T cellMolecular Networks (q-bio.MN)PhosphatasemultistationarityDynamical Systems (math.DS)24Dissociation (chemistry)immunology03 medical and health sciences119medicineFOS: Mathematics1008Quantitative Biology - Molecular NetworksMathematics - Dynamical Systemslcsh:ScienceReceptort cellsMultidisciplinaryChemistryT-cell receptor92C37Dissociation constant030104 developmental biologymedicine.anatomical_structureFOS: Biological sciencesBiophysicsPhosphorylationlcsh:QMathematicsResearch Article
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