Search results for "bird"

showing 10 items of 420 documents

Indigenous yeast communities in the environment of ‘‘Rovello bianco’’ grape variety and their use in commercial white wine fermentation

2009

The indigenous yeast communities associated with several vineyard habitats were analysed. Wild yeasts were isolated, differentiated at strain level and identified. A phylogenetic tree based on partial 26S rRNA genes was constructed. The strains were characterized and the indigenous Saccharomyces cerevisiae GR1 was then used to carry out a vinification process and compared with a commercial yeast. Wines obtained were subjected to chemical and sensory analysis. The comparison between the two products highlighted differences due to the fer- menting strains employed. The vineyard environment was found to strongly influence the composition of yeast communities, thus, confirming the theory of ‘te…

Fermentation in winemakingWinebiologyAscomycotaPhylogenetic treeBirds Grape variety ‘‘Rovello bianco’’ or ‘‘Greco muscio’’ PCR-DGGE Saccharomyces cerevisiae Vineyard environment Wild yeasts Wine fermentationPhysiologySaccharomyces cerevisiaefood and beveragesGeneral Medicinebiology.organism_classificationApplied Microbiology and BiotechnologyVineyardYeastBirds Grape variety ‘‘Rovello bianco’’ or ‘‘Greco muscio’’ PCR-DGGEBotanyFermentationBiotechnologySettore AGR/16 - Microbiologia Agraria
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Response of an arctic predator guild to collapsing lemming cycles

2012

6 pages; International audience; Alpine and arctic lemming populations appear to be highly sensitive to climate change, and when faced with warmer and shorter winters, their well-known high-amplitude population cycles may collapse. Being keystone species in tundra ecosystems, changed lemming dynamics may convey significant knock-on effects on trophically linked species. Here, we analyse long-term (1988-2010), community-wide monitoring data from two sites in high-arctic Greenland and document how a collapse in collared lemming cyclicity affects the population dynamics of the predator guild. Dramatic changes were observed in two highly specialized lemming predators: snowy owl and stoat. Follo…

Food ChainCarnivoraGreenlandPopulation DynamicsPopulationModels BiologicalGeneral Biochemistry Genetics and Molecular BiologyBirdsArcticDicrostonyx groenlandicusbiology.animal[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsArctic foxKeystone specieseducationPredatorResearch ArticlesGeneral Environmental Sciencepredator-prey interactioneducation.field_of_study[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyGeneral Immunology and MicrobiologybiologyArctic RegionsArvicolinaeEcologyReproductionCollared lemmingcyclic population dynamicsGeneral Medicinebiology.organism_classificationclimate changeArcticGuildPopulation cycleSeasonsGeneral Agricultural and Biological Sciences
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Seasonal changes in predator community switch the direction of selection for prey defences

2014

Insect communities consist of aposematic species with efficient warning colours against predation, as well as abundant examples of crypsis. To understand such coexistence, we here report results from a field experiment where relative survival of artificial larvae, varying in conspicuousness, was estimated in natural bird communities over an entire season. This takes advantage of natural variation in the proportion of naive predators: naivety peaks when young birds have just fledged. We show that the relative benefit of warning signals and crypsis changes accordingly. When naive birds are rare (early and late in the season), conspicuous warning signals improve survival, but conspicuousness b…

Food ChainNaivetymedia_common.quotation_subjectAdaptation BiologicalGeneral Physics and Astronomy1600 General ChemistryGenetics and Molecular BiologyInsectAposematismBiologyArticleStatistics NonparametricGeneral Biochemistry Genetics and Molecular BiologyPredationBirds10127 Institute of Evolutionary Biology and Environmental StudiesFood chainSpecies Specificity1300 General Biochemistry Genetics and Molecular BiologyAnimalsOrganic ChemicalsSelection GeneticPredatorFinlandmedia_commonMultidisciplinaryPigmentationEcologyFledgeGeneral Chemistry3100 General Physics and AstronomyLepidopteraLarvaGeneral BiochemistryCrypsista1181570 Life sciences; biology590 Animals (Zoology)SeasonsNature Communications
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Seabird influence on ecological processes in coastal marine ecosystems: An overlooked role? A critical review

2021

Abstract Seabirds are vital, but overlooked, components of coastal marine ecosystems and may connect the marine and terrestrial environment at a global scale, significantly contributing to inter-habitat connectivity and the provision of multiple ecosystem services. Although the ecological and functional role of birds in terrestrial areas, islands in particular, has been deeply studied since the last century, the same does not hold true for coastal marine areas. Given the importance of coastal areas for seabirds worldwide and, at the same time, the high vulnerability of both, looking into the role of seabirds in influencing the ecosystem functioning in coastal areas is needed nowadays. Here,…

Functional rolebiologyEcologyWadersVulnerabilityAquatic ScienceOceanographyAllochthonous inputEcosystem servicesGeographybiology.animalEcological functionsWaterbirdsEcosystem servicesTerrestrial ecosystemMarine ecosystemEcosystemSeabirdAquatic birdsTrophic levelEstuarine, Coastal and Shelf Science
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Is the population genetic structure of complex life cycle parasites determined by the geographic range of the most motile host?

2010

Due to their particular way of life, dispersal of parasites is often mediated by their host's biology. Dispersal distance is relevant for parasites because high degree of dispersal leads to high gene flow, which counters the rate of parasite local adaptation in the host populations. Parasites with complex life cycles need to exploit sequentially more than one host species to complete their life cycle. Most trematode parasites have such complex life cycles involving invertebrate and vertebrate hosts. The spatial scales of invertebrate and vertebrate host populations are often different, which may decrease the probability that the parasite cycles locally in the intermediate host population. W…

Gene Flow0106 biological sciencesMicrobiology (medical)Population DynamicsPopulationZoologyTrematode InfectionsBiologyPolymerase Chain Reaction010603 evolutionary biology01 natural sciencesMicrobiologyHost-Parasite InteractionsCharadriiformesFish Diseases03 medical and health sciencesGeneticsAnimalseducationMolecular BiologyEcology Evolution Behavior and SystematicsLymnaea030304 developmental biologyLocal adaptationIsolation by distanceLife Cycle Stages0303 health scienceseducation.field_of_studyPolymorphism GeneticBase SequenceGeographyBird DiseasesHost (biology)FishesIntermediate hostGenetic Variationbiology.organism_classificationObligate parasiteInfectious DiseasesBiological dispersalAnimal MigrationDNA IntergenicTrematodaTrematodaMicrosatellite RepeatsInfection, Genetics and Evolution
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Morphology and genetics reveal an intriguing pattern of differentiation at a very small geographic scale in a bird species, the forest thrush Turdus …

2014

12 pages; International audience; Mobile organisms are expected to show population differentiation only over fairly large geographical distances. However, there is growing evidence of discrepancy between dispersal potential and realized gene flow. Here we report an intriguing pattern of differentiation at a very small spatial scale in the forest thrush (Turdus lherminieri), a bird species endemic to the Lesser Antilles. Analysis of 331 individuals from 17 sampling sites distributed over three islands revealed a clear morphological and genetic differentiation between these islands isolated by 40-50 km. More surprisingly, we found that the phenotypic divergence between the two geographic zone…

Gene FlowGenotypePopulationForestsBiologyDNA MitochondrialGene flowForest thrushEvolution MolecularSongbirdsGeneticsAnimalseducationGuadeloupeGenetics (clinical)IslandsmtDNA control regioneducation.field_of_studyHabitat fragmentationGeographyModels GeneticEcology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Sequence Analysis DNA15. Life on landbiology.organism_classificationGenetics PopulationPhenotype[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Spatial ecologyBiological dispersalMicrosatelliteOriginal ArticleMicrosatellite Repeats
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Phylogenomics of Enterococcus faecalis from wild birds: new insights into host‐associated differences in core and accessory genomes of the species

2019

Wild birds have been suggested to be reservoirs of antimicrobial resistant and/or pathogenic Enterococcus faecalis (Efs) strains, but the scarcity of studies and available sequences limit our understanding of the population structure of the species in these hosts. Here, we analysed the clonal and plasmid diversity of 97 Efs isolates from wild migratory birds. We found a high diversity, with most sequence types (STs) being firstly described here, while others were found in other hosts including some predominant in poultry. We found that pheromone‐responsive plasmids predominate in wild bird Efs while 35% of the isolates entirely lack plasmids. Then, to better understand the ecology of the sp…

Gene Transfer HorizontalPopulation structureAnimals WildBiologyMicrobiologyGenomeEnterococcus faecalisHost SpecificityBirds03 medical and health sciencesPlasmidPhylogeneticsPhylogenomicsEnterococcus faecalisAnimalsEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biology0303 health sciences030306 microbiologyHost (biology)Gene Expression Regulation Bacterialbiology.organism_classificationEvolutionary biologyHorizontal gene transferGenome Bacterial
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High-Performance PCR for Alleles Discrimination of Chromo-Helicase-DNA Binding Protein (CHD1) Gene in Bird Sexing

2023

Genetic analyses aiming at assessing the presence of specific sequences or alleles are often carried out by PCR. Sexing of most birds is nowadays based on PCR with “universal” primers and relies on the assessment of the presence of the sex-linked CHD1-Z and -W alleles. The entire workflow is relatively time-consuming, especially for batch analyses, whereas methods that allow carrying out the entire procedure in a short time are highly desirable. The only method for outdoor analyses reported so far relies on LAMP; however; it fails to work properly in Procellariiformes. Besides improving the LAMP test; we have developed a PCR-based DNA amplification procedure (named high-performance PCR); wh…

General Immunology and Microbiologyhigh-performance PCRloop-mediated isothermal amplification (LAMP)fast DNA extractionGeneral Agricultural and Biological SciencesGeneral Biochemistry Genetics and Molecular BiologyProcellariiformesrapid bird sexingBiology
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Non-Invasive Sex Determination of Nestlings and Adult Bonelli’s Eagles Using Morphometrics

2023

Biometric analysis allows the sexing of most vertebrates, particularly birds. Birds of prey, and, especially, the Bonelli’s eagle (Aquila fasciata), show reverse sexual dimorphism (i.e., females are usually larger than males). In contrast to blood sampling, the use of morphometrics allows sex determination using a non-invasive method, and, therefore, it facilitates fieldwork. By means of a linear discriminant analysis of biometric variables, we obtained different equations that allow the sexing of nestlings and adult Bonelli’s eagles. We sampled 137 Bonelli’s eagles, 82 nestlings and 55 adults in eastern Spain during the period 2015–2022. The sexes obtained after lin…

General VeterinaryZoologiaEspècies (Biologia)Animal Science and ZoologyAccipitridae; birds; biometry; LDA; molecular sexing; PCR; raptors; reverse sexual dimorphism; sexingAnimals
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Using genetic markers to unravel the origin of birds converging towards pre-migratory sites

2018

AbstractIdentifying patterns of individual movements in spatial and temporal scales can provide valuable insight into the structure of populations and the dynamics of communities and ecosystems. Especially for migrating birds, that can face a variety of unfavorable conditions along their journey, resolving movements of individuals across their annual cycle is necessary in order to design better targeted conservation strategies. Here, we studied the movements of a small migratory falcon, the Lesser Kestrel (Falco naumanni), by genetically assigning feathers from individuals of unknown origin that concentrate in large roosts during the pre-migratory period. Our findings suggest that birds fro…

Genetic Markers0106 biological sciencesPopulation DynamicsSettore BIO/05 - Zoologialcsh:MedicineKestrellesser kestrel pre-migratory stage microsatellites genetic of migrationBreeding010603 evolutionary biology01 natural sciencesArticle010605 ornithologyBirdsSexual Behavior AnimalAnimalsEcosystem14. Life underwaterlcsh:ScienceTemporal scalesEcosystemFalconiformesMultidisciplinarybiologyMediterranean RegionEcologylcsh:RFalco naumanniBalkan Peninsula15. Life on landbiology.organism_classificationEastern mediterraneanGeographyGenetic markerAnimal Migrationlcsh:QOrigin of birdsSeasonsScientific Reports
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