Search results for "block"
showing 10 items of 1177 documents
Bayesian analysis and design for comparison of effect-sizes
2002
Comparison of effect-sizes, or more generally, of non-centrality parameters of non-central t distributions, is a common problem, especially in meta-analysis. The usual simplifying assumptions of either identical or non-related effect-sizes are often too restrictive to be appropriate. In this paper, the effect-sizes are modeled as random effects with t distributions. Bayesian hierarchical models are used both to design and analyze experiments. The main goal is to compare effect-sizes. Sample sizes are chosen so as to make accurate inferences about the difference of effect-sizes and also to convincingly solve the testing of equality of effect-sizes if such is the goal.
Morphology changes induced by intercellular gap junction blocking: A reaction-diffusion mechanism.
2021
Complex anatomical form is regulated in part by endogenous physiological communication between cells; however, the dynamics by which gap junctional (GJ) states across tissues regulate morphology are still poorly understood. We employed a biophysical modeling approach combining different signaling molecules (morphogens) to qualitatively describe the anteroposterior and lateral morphology changes in model multicellular systems due to intercellular GJ blockade. The model is based on two assumptions for blocking-induced patterning: (i) the local concentrations of two small antagonistic morphogens diffusing through the GJs along the axial direction, together with that of an independent, uncouple…
Substitution systems and nonextensive statistics
2015
Abstract Substitution systems evolve in time by generating sequences of symbols from a finite alphabet: At a certain iteration step, the existing symbols are systematically replaced by blocks of N k symbols also within the alphabet (with N k , a natural number, being the length of the k th block of the substitution). The dynamics of these systems leads naturally to fractals and self-similarity. By using B -calculus (Garcia-Morales, 2012) universal maps for deterministic substitution systems both of constant and non-constant length, are formulated in 1D. It is then shown how these systems can be put in direct correspondence with Tsallis entropy. A ‘Second Law of Thermodynamics’ is also prove…
On the empirical spectral distribution for certain models related to sample covariance matrices with different correlations
2021
Given [Formula: see text], we study two classes of large random matrices of the form [Formula: see text] where for every [Formula: see text], [Formula: see text] are iid copies of a random variable [Formula: see text], [Formula: see text], [Formula: see text] are two (not necessarily independent) sets of independent random vectors having different covariance matrices and generating well concentrated bilinear forms. We consider two main asymptotic regimes as [Formula: see text]: a standard one, where [Formula: see text], and a slightly modified one, where [Formula: see text] and [Formula: see text] while [Formula: see text] for some [Formula: see text]. Assuming that vectors [Formula: see t…
Energy efficient modulation of dendritic processing functions
1998
The voltage dependent ionic conductances and the passive properties of the neural membrane determine how external inputs are processed by the dendritic tree, and define the computational characteristics of neurons. However, what controls these characteristics and how they are implemented at the single neuron level, in such a way that an external input results in the coding of the appropriate output, is essentially unknown. We show here that a slow inactivation of the Na+ channel, involved in the attenuation and/or failure of APs in the dendrites, acts as an active and energy efficient filter of synaptic input, and results in an activity-dependent control of the properties of individual neur…
Dynamical block analysis in a non-equilibrium system
1991
Abstract We present molecular dynamics simulation results of quenches into the unstable region of a two-dimensional Lennard-Jones system. The evolution of the system from the non-equilibrium state into equilibrium was analyzed with a dynamical block analysis. This can lead to a new approach in the study of non-equilibrium phenomena. We show that with such an analysis one can obtain results on the dynamic evolution as the system evolves, consistent with those obtained from and analysis of the pair-distribution function, structure factor and excess energy. The simulations were carried out on the parallel computer of the condensed matter theory group at the University of Mainz.
Block–Savits Characterization and Star Ordering of Exponential Mixtures
2008
Block and Savits (1980) established a characterization of life distributions using the Laplace transform. In this article, we remark that one of the necessary conditions to be IFRA distribution is equivalent to the star ordering of exponential mixtures. It leads to the definition of two new classes of life distributions, called LIFR and LIFRA, and their dual classes: LDFR and LDFRA. It occurs that these classes have many useful aging properties and preserve known reliability operations. Properties of the classes are studied and relations with known classes are established.
kmcEx: memory-frugal and retrieval-efficient encoding of counted k-mers.
2018
Abstract Motivation K-mers along with their frequency have served as an elementary building block for error correction, repeat detection, multiple sequence alignment, genome assembly, etc., attracting intensive studies in k-mer counting. However, the output of k-mer counters itself is large; very often, it is too large to fit into main memory, leading to highly narrowed usability. Results We introduce a novel idea of encoding k-mers as well as their frequency, achieving good memory saving and retrieval efficiency. Specifically, we propose a Bloom filter-like data structure to encode counted k-mers by coupled-bit arrays—one for k-mer representation and the other for frequency encoding. Exper…
Brownian motion in trapping enclosures: Steep potential wells, bistable wells and false bistability of induced Feynman-Kac (well) potentials
2019
We investigate signatures of convergence for a sequence of diffusion processes on a line, in conservative force fields stemming from superharmonic potentials $U(x)\sim x^m$, $m=2n \geq 2$. This is paralleled by a transformation of each $m$-th diffusion generator $L = D\Delta + b(x)\nabla $, and likewise the related Fokker-Planck operator $L^*= D\Delta - \nabla [b(x)\, \cdot]$, into the affiliated Schr\"{o}dinger one $\hat{H}= - D\Delta + {\cal{V}}(x)$. Upon a proper adjustment of operator domains, the dynamics is set by semigroups $\exp(tL)$, $\exp(tL_*)$ and $\exp(-t\hat{H})$, with $t \geq 0$. The Feynman-Kac integral kernel of $\exp(-t\hat{H})$ is the major building block of the relaxatio…
Process understanding of a wastewater batch reactor with block-wise PLS
2007
In this work a systematic methodology ‘block-wise PLS’ has been applied to thoroughly analyse data from a sequencing batch reactor (SBR) operated for biological phosphorus removal from wastewater. The aim of this study was to diagnose process variables (collected by the inexpensive and low-maintenance sensors installed in the SBR) likely related to the main key indicator of process performance: the phosphorus removal efficiency (PRE), determined off-line in the quality control laboratory. In this way, it is intended to aid the process operators in the detection of abnormal values of these critical variables which would indicate undesirable process performance, so that, they could act on the…