Search results for "bond"

showing 10 items of 3527 documents

Molecular and crystal structure of Ac-(Z)-ΔAbu-NMe2 and Ac-DL-Abu-NMe2 as compared to those of related molecules

2004

Abstract The molecular and crystal structures of two homologous amino acid derivatives: N-acetyl-α,β-dehydro-butyrine N´,N´-dimethylamide (1) and N-acetyl-DL-butyrine N´,N´-dimethylamide (2), have been determined by X-ray crystallography. Similar solid-state association of both compounds is observed; despite different molecular conformation, they form centrosymmetric dimers linked by the intermolecular N–H…O hydrogen bonds. The conformation of two crystallographically independent molecules of 1 [with torsion angles ϕ, ψ, χ 1 ≈ (–47°, 130°, 3°), respectively] is also characteristic of other related diamides – ΔAla, ΔPhe and ΔLeu – previously studied in the solid state. To analyse whether thi…

Hydrogen bondStereochemistryChemistryIntermolecular forceAb initioN′Crystal structureSingle crystal structure analysisCondensed Matter PhysicsN′-dimethylamidesX-ray diffractionInorganic ChemistryCrystallographyButyridine derivativeAb initio quantum chemistry methodsX-ray crystallographyMoleculePeptide designGeneral Materials ScienceAb initio DFT calculationsConformational isomerismZeitschrift Fur Kristallographie
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Synthesis of tetrahalide dianions directed by crystal engineering

2015

CrystEngComm 17(35), 6641-6645(2015). doi:10.1039/C5CE01288K

Hydrogen bondStereochemistryChemistryRational designCharge (physics)General ChemistryCrystal structureCondensed Matter PhysicsCrystal engineering540crystal engineeringChemical physicsHalogenddc:540tetrahalide dianionsGeneral Materials Scienceta116
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rac-Ethyl (2Z)-3-{2-[(Z)-4-ethoxy-4-oxobut-2-en-2-ylamino]cyclohexylamino}but-2-enoate

2011

The asymmetric unit of the title compound, C18H30N2O4, contains two independent molecules. In each molecule, the cyclohexane ring adopts a chair conformation with equatorial orientation of the substituents, and the conformation is stabilized by two intramolecular N—H...O hydrogen bonds, forming rings of S(6) graph-set motif. One ethoxy group and one ethyl group are disordered over two sets of sites with refined occupancy ratios of 0.704 (2):0.296 (2) and 0.505 (3):0.495 (3), respectively. In the crystal, a weak intermolecular C—H...O hydrogen interaction is observed, involving the O atom of the major component of the disordered eth…

Hydrogen bondStereochemistryCyclohexane conformationGeneral ChemistryCondensed Matter PhysicsRing (chemistry)BioinformaticsOrganic Paperslcsh:Chemistrychemistry.chemical_compoundchemistrylcsh:QD1-999Group (periodic table)General Materials ScienceEthyl groupActa Crystallographica Section E
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Topological control in the hydrogen bond-directed self-assembly of ortho-, meta-, and para-phenylene-substituted dioxamic acid diethyl esters

2010

[EN] The structures of the series of N,N¿-1,n-phenylenebis(oxamic acid ethyl ester) molecules with n = 2 (H2Et2opba, 1), 3 (H2Et2mpba, 2), and 4 (H2Et2ppba, 3) have been determined by single-crystal X-ray diffraction (XRD) methods. Density functional (DF) calculations have been performed on the simplest model system N-phenyloxamic acid methyl ester (HMepma). Compounds 1¿3 have either folded (H2Et2opba), bent (H2Et2mpba), or linear (H2Et2ppba) almost planar (periplanar) molecular configurations with the two oxalamide moieties being slightly tilted up and down, respectively, with respect to the benzene ring. The energy calculations as a function of the torsion angle (¿) around the N(amide)¿C(…

Hydrogen bondStereochemistryDimerIntermolecular forceGeneral ChemistryCondensed Matter PhysicsCrystallographychemistry.chemical_compoundchemistryPhenyleneCovalent bondFISICA APLICADAAmideIntramolecular forceMoleculeGeneral Materials ScienceCrystEngComm
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Synthesis and characterization of four novel manganese(II) chains formed by 4,4′-azobis(pyridine) and benzoate or nitrobenzoates: Stabilization of un…

2013

Abstract Four new manganese(II) coordination polymers: [Mn(4,4′-azpy)(C6H5COO)2](4,4′-azpy)0.5 (1), [Mn(4,4′-azpy)(p-(NO2)C6H4COO)2] (2), [Mn(4,4′-azpy)(m-(NO2)C6H4COO)2] (3) and [Mn(4,4′-azpy)(o-(NO2)C6H4COO)2(H2O)2] (4), where 4,4′-azpy = 4,4′-azobis(pyridine), have been synthesized by self-assembly of MnX2 (X = benzoate, p-, m-, or o-nitrobenzoates) together with 4,4′-azpy. All four complexes were characterized by elemental analyses, IR spectroscopy, thermal analyses, single-crystal X-ray diffraction analyses and variable-temperature magnetic measurements. The structural analyses reveal that complexes 1, 2 and 3 feature a 1D molecular ladder formed by syn–syn (complex 1) or syn–anti (com…

Hydrogen bondStereochemistryDimerSupramolecular chemistryCrystal structureZero field splittingMagnetic susceptibilityInorganic Chemistrychemistry.chemical_compoundCrystallographychemistryPyridineMaterials ChemistryMoleculePhysical and Theoretical ChemistryPolyhedron
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N-(3-Methoxypropyl)-1,8-naphthalimide

2003

In the title compound, C16H15NO3, the 1,8-naphthaleno­dicarbox­imide group is nearly planar and, in the naphthal­imide ring system, the characteristic alternating pattern of bond lengths is observed. In the crystal, the mol­ecules are connected by a weak C—H⋯O hydrogen bond and extend in the direction parallel to the b axis.

Hydrogen bondStereochemistryGeneral ChemistryCondensed Matter PhysicsRing (chemistry)Bond lengthCrystalchemistry.chemical_compoundCrystallographyPlanarchemistryGroup (periodic table)General Materials ScienceImideActa Crystallographica Section E Structure Reports Online
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1,4-Dihydro-1-methyl-4-nitriminopyridine Dihydrate

1998

Molecules of the title compound, C6H7N302.2H20, are almost planar with the NNO2 nitrimino group twisted 8 (1) ° out of the plane of the pyridine ring. The nitrimino group and CsN ring form a conju- gated 7r-electron system. These molecules together with water molecules are arranged in planes, They are con- nected with each other by O--H.-.O, O--H...N and weaker C--H..-O hydrogen bonds. Four water mol- ecules form a planar square (OH..-O--H)2 ring with O-..O distances equal to 2.741 (2) and 2.778(2)A. These rings join pairs of molecular planes into double layers, interacting otherwise by van der Waals forces.

Hydrogen bondStereochemistryGeneral MedicineCrystal structureConjugated systemRing (chemistry)General Biochemistry Genetics and Molecular Biologychemistry.chemical_compoundCrystallographysymbols.namesakechemistryGroup (periodic table)PyridinesymbolsMoleculevan der Waals forceActa Crystallographica Section C Crystal Structure Communications
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Chromium(III) complexes with 2-(2′-pyridyl)imidazole: Synthesis, crystal structure and magnetic properties

2011

Abstract The preparation, crystal structure and variable temperature-magnetic investigation of three 2-(2′-pyridyl)imidazole-containing chromium(III) complexes of formula PPh4[Cr(pyim)(C2O4)2]·H2O (1), AsPh4[Cr(pyim)(C2O4)2]·H2O (2) and [Cr2(pyim)2(C2O4)2(OH2)2]·2pyim · 6H2O (3) [pyim = 2-(2′-pyridyl)imidazole, C 2 O 4 2 - = dianion of oxalic acid , PPh 4 + = tetraphenylphosphonium cation and AsPh 4 + = tetraphenylarsonium cation ] are reported herein. The isomorphous compounds are made up of discrete [Cr(pyim)(C2O4)2]− anions, XPh 4 + cations [X = P (1) and As (2)] and uncoordinated water molecules. The chromium environment in 1 and 2 is distorted octahedral with Cr–N and Cr–O bond distanc…

Hydrogen bondStereochemistrychemistry.chemical_elementCrystal structureMagnetic susceptibilityOxalateInorganic Chemistrychemistry.chemical_compoundChromiumCrystallographychemistryIntramolecular forceMaterials ChemistryImidazoleMoleculePhysical and Theoretical ChemistryInorganica Chimica Acta
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[(1,4,8,11-Tetraazacyclotetradeca-1,4,8,11-tetrayl)tetraacetamide-kappa6N1,N4,N8,N11,O1,O8]copper(II) sulfate 4.5-hydrate.

2002

The crystal structure of the title copper(II) complex, [Cu(C(18)H(36)N(8)O(4))]SO(4).4.5H(2)O, formed with the tetraamide cyclam derivative 2-(4,8,11-triscarbamoylmethyl-1,4,8,11-tetraazacyclotetradec-1-yl)acetamide (TETAM), is described. The macrocycle lies on an inversion centre occupied by the hexacoordinated Cu atom. The four macrocyclic tertiary amines form the equatorial plane of an axially Jahn-Teller elongated octahedron. Two O atoms belonging to two diagonally opposite amide groups occupy the apical positions, giving rise to a trans-III stereochemistry, while both the remaining pendant side arms extend outwards from the macrocyclic cavity and are engaged in hydrogen bonds with sulf…

Hydrogen bondStereochemistrychemistry.chemical_elementGeneral MedicineCrystal structureCopperGeneral Biochemistry Genetics and Molecular BiologyCopper(II) sulfatechemistry.chemical_compoundCrystallographychemistryAmideCyclammedicineElongated octahedronHydratemedicine.drugActa crystallographica. Section C, Crystal structure communications
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Synthesis, structural and spectroscopic characterization of the α,ω-diammonioalkane hexabromorhodates(III) [H3N(CH2)xNH3]2[H 5O2][RhBr6]Br2 (x = 3, 4…

2002

The reaction of rhodium(III) chloride trihydrate with 1,3-diaminopropane and 1,4-diaminobutane in concentrated hydrobromic acid results in the formation of the bis(α,ω-diammonioalkane) diaquahydrogen(1+) hexabromorhodate(III) dibromides [H3N(CH2)xNH3]2[H5O2][RhBr6]Br2 (x = 3, 4). Dark red single crystals were obtained by diffusion-controlled crystallization at room temperature. Both compounds crystallize in space group type P1̄ and their structures are closely related. In view of crystal engineering they are inorganic-organic hybrid materials built up from octahedral [RhBr6]3−, simple Br− and flexible chain-like [H3N(CH2)xNH3]2+ ions with the [H5O2]+ and further Br− ions incorporated and th…

Hydrogen bondStereochemistrychemistry.chemical_elementInfrared spectroscopyGeneral ChemistryCrystal engineeringRhodiumlaw.inventionCrystalCrystallographychemistry.chemical_compoundchemistryOctahedronlawHydrobromic acidCrystallization
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