Search results for "bonding"

showing 10 items of 996 documents

Crystal structure of 4-(4-chlorophenyl)-6-(morpholin-4-yl)pyridazin-3(2H)-one

2015

In the crystal, pairs of centrosymmetrically related mol­ecules are linked into dimers via N—H⋯O hydrogen bonds, forming (8) ring motifs. The dimers are connected via C—H⋯O and C—H⋯Cl hydrogen bonds, forming a three-dimensional network·Semi-empirical mol­ecular orbital calculations were carried out using the AM1 method.

crystal structureHydrogen bondCyclohexane conformationStackingpi-pi stacking interactionsGeneral ChemistryCrystal structureDihedral anglehydrogen bondingCondensed Matter PhysicsRing (chemistry)Research Communicationslcsh:ChemistryCrystalchemistry.chemical_compoundCrystallographylcsh:QD1-999chemistryπ–π stacking interactionsMorpholineGeneral Materials Sciencepyridazinone derivativeπ–π stacking inter­actions
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Crystal structure of (E)-N-(3,4-di­meth­oxy­benzyl­idene)morpholin-4-amine

2014

In the title compound, C13H18N2O3, the benzene ring makes a dihedral angle of 17.19 (11)° with the least-squares plane formed by the four C atoms of the morpholine ring, which adopts a chair conformation. In the crystal, C—H...N hydrogen bonds link the molecules into supramolecular chains running along a 21screw axis parallel to theb-axis direction. Weak C—H...π interactions are also observed.

crystal structureHydrogen bondCyclohexane conformationSupramolecular chemistryGeneral ChemistryCrystal structureDihedral angleCondensed Matter PhysicsBioinformaticsRing (chemistry)hydrogen bondingC—H⋯π inter­actionsData Reportslcsh:ChemistryCrystalCrystallographychemistry.chemical_compoundC—H...π interactionslcsh:QD1-999chemistryMorpholineGeneral Materials ScienceSchiff basesC - H?? interactionsmorpholin-4-amineActa Crystallographica Section E: Structure Reports Online
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Crystal structure and Hirshfeld surface analysis of 2-[(1,3-benzoxazol-2-yl)sulfanyl]-N-(2-methoxyphenyl)acetamide

2019

Akkurt, Mehmet/0000-0003-2421-0929; Saylam, Merve/0000-0002-7602-4565

crystal structureHydrogen bondGeneral ChemistryCrystal structureDihedral angleCondensed Matter::Mesoscopic Systems and Quantum Hall Effecthydrogen bonding010402 general chemistry010403 inorganic & nuclear chemistryCondensed Matter PhysicsRing (chemistry)01 natural sciences13-benzoxazole ring system0104 chemical scienceslcsh:ChemistryCrystaldimerschemistry.chemical_compoundCrystallographylcsh:QD1-999chemistryHirshfeld surface analysisGeneral Materials ScienceBenzeneAcetamideActa Crystallographica Section E Crystallographic Communications
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Crystal structure of dimethylammonium hydrogen oxalate hemi(oxalic acid)

2015

The title salt consists of a di­methyl­ammonium cation (Me2NH2 +), an hydrogenoxalate anion (HC2O4 −), and half a mol­ecule of oxalic acid (H2C2O4) situated about an inversion center. They are linked together through inter­molecular hydrogen bonds, forming a two-dimensional bilayer-like self-assembly.

crystal structureHydrogenInorganic chemistryOxalic acidSalt (chemistry)chemistry.chemical_elementCrystal structureHydrogenoxalateOxalateResearch Communicationschemistry.chemical_compoundGeneral Materials Sciencechemistry.chemical_classificationCrystallographyHydrogen bondGeneral ChemistryCondensed Matter Physicshydrogen bondingoxalic acid.CrystallographychemistryQD901-999organic saltdialkyammoniumMethanolhydrogenoxalateActa Crystallographica Section E: Crystallographic Communications
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Crystal structure and Hirshfeld surface analysis of a pyridiniminium bromide salt: 1-[2-(adamantan-1-yl)-2-oxoethyl]pyridin-4-iminium bromide

2018

The asymmetric unit of the title pyridiniminium halide salt comprise of one cation and one anion. In the crystal, mol­ecules are linked by N—H⋯Br and C—H⋯O hydrogen bonds, C—H⋯π inter­actions, and π–π inter­actions into layers. The inter­molecular inter­actions in the crystal structure are qu­anti­fied by Hirshfeld surface analysis.

crystal structureKetoneStackingCrystal structureDihedral angle010402 general chemistry01 natural sciencesResearch Communicationschemistry.chemical_compoundBromideMoietyHirshfeld surface analysisGeneral Materials Sciencepyridiniminium saltchemistry.chemical_classificationCrystallography010405 organic chemistryChemistryHydrogen bondIminiumGeneral ChemistryCondensed Matter Physicshydrogen bonding0104 chemical sciencesCrystallographyQD901-999Acta Crystallographica Section E: Crystallographic Communications
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Crystal structure and Hirshfeld surface analysis of (E)-3-[(4-fluorobenzylidene)amino]-5-phenylthiazolidin-2-iminium bromide

2019

TARAMAPUBMED TARAMASCOPUS TARAMAWOS In the cation of the title salt, C16H15FN3S+·Br−, the phenyl ring is disordered over two sets of sites with a refined occupancy ratio of 0.503 (4):0.497 (4). The mean plane of the thia­zolidine ring makes dihedral angles of 13.51 (14), 48.6 (3) and 76.5 (3)° with the fluoro­phenyl ring and the major- and minor-disorder components of the phenyl ring, respectively. The central thia­zolidine ring adopts an envelope conformation. In the crystal, centrosymmetrically related cations and anions are linked into dimeric units via N—H...Br hydrogen bonds, which are further connected by weak C—H...Br hydrogen bonds into chains parallel to [110]. Hirshfeld surface an…

crystal structureStackingCrystal structure010402 general chemistryRing (chemistry)01 natural sciencesCrystalHirshfeld surface analysis.chemistry.chemical_compoundBromideThia­zolidine ringcharge assisted hydrogen bondingHirshfeld surface analysisGeneral Materials ScienceBenzeneCrystallography010405 organic chemistryHydrogen bondIminiumdisorderGeneral ChemistryCondensed Matter::Mesoscopic Systems and Quantum Hall EffectCondensed Matter Physics0104 chemical sciencesCrystallographychemistryQD901-999thiazolidine ringActa Crystallographica Section E Crystallographic Communications
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Geometrical and conformational preferences of the 9‐fluorenylmethoxycarbonyl‐amino moiety

2004

Structural parameters, originating from x-ray crystallographic data, have been compiled for 13 derivatives of amino acids, peptides and related compounds, which contain a total of 14 Fmoc-NH- moieties. For these moieties, molecular geometries and conformations--described by the omegao, theta1, theta2 and theta3' torsion angles--were analysed and compared with the corresponding parameters for the Z-NH- and Boc-NH-moieties (290 and 553, respectively). To gain a deeper insight into the conformational features of the Fmoc-NH- moiety, ab initio free molecule calculations were performed for fully relaxed minima. Also the potential energy surface as a function of the torsion angles (theta3', theta…

crystal structureStereochemistryAb initioMolecular ConformationCrystal structureCrystallography X-RayBiochemistryBoc amino protectionStructure-Activity RelationshipfluoreneStructural BiologyAb initio quantum chemistry methodsDrug DiscoveryMoleculeMoietyurethane geometryFmoc amino protectionAmino AcidsMolecular BiologyPharmacologyFluorenesMolecular StructureChemistryHydrogen bondab initio calculationsOrganic ChemistryHydrogen BondingGeneral MedicineZ amino protectionMolecular geometryPotential energy surfaceMolecular MedicineCrystallizationPeptidesN‐terminally protected peptidesJournal of Peptide Science
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Crystal structure of bis-(2-methyl-1H-imidazole-κN (3))(meso-tetra-p-tol-ylporphyrinato-κ(4) N)iron(III) perchlorate tetra-hydro-furan sesquisolvate.

2016

The crystal structure of the six-coordinate, highly ruffled, ferric porphyrinate bis­(2-methyl­imidazole)[meso-tetra­kis­(p-tol­yl)porphyrinato]iron(III) perchlorate is reported.

crystal structureStereochemistryCrystal structureDihedral angle010402 general chemistry010403 inorganic & nuclear chemistry2-methylimidazole01 natural sciencesResearch CommunicationsPerchloratechemistry.chemical_compoundhighly ruffled porphyrin coremeso-tetra­kis­(p-tol­yl)porphyrinatoImidazoleGeneral Materials ScienceCrystallography2-methyl­imidazoleLigandHydrogen bondGeneral ChemistryCondensed Matter Physicshydrogen bondingPorphyrinmeso-tetrakis(p-tolyl)porphyrinato0104 chemical sciencesBond lengthCrystallographychemistryQD901-999iron(III)Acta crystallographica. Section E, Crystallographic communications
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Crystal structure of [tris(4,4-bipyridine)]diium bis(1,1,3,3-tetracyano-2-ethoxypropenide) trihydrate

2016

In the title hydrated salt, which was obtained from the hydro­thermal reaction between between potassium 1,1,3,3-tetra­cyano-2-eth­oxy­propenide and 4,4′-bi­pyridine in the presence of iron(II) sulfate hepta­hydrate, the ionic components are linked into a three-dimensional network by C—H⋯N hydrogen bonds.

crystal structureStereochemistryIonic bondingmolecular structureCrystal structurehydro­thermal synthesis010402 general chemistry010403 inorganic & nuclear chemistry01 natural sciencesResearch Communicationslaw.inventionlcsh:Chemistrychemistry.chemical_compoundpolynitrile anionslawPyridineMoleculeGeneral Materials ScienceHydrothermal synthesisQDCrystallizationta215ta116mol­ecular structureHydrogen bondChemistryDASGeneral ChemistryCondensed Matter PhysicsQD Chemistryhydrogen bonding0104 chemical sciences44'-BipyridineCrystallographyhydrothermal synthesislcsh:QD1-999HydrateMolecular structure
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Crystal structure of bis(cyclohexylammonium) diphenyldioxalatostannate(IV)

2015

In the title salt, (CyNH3)2[Sn(Ph2)(C2O4)2] (Cy is cyclo­hexyl and Ph is phen­yl), the SnPh2 moiety is chelated by two oxalate anions, leading to a cis arrangement within the distorted octa­hedral coordination sphere of the SnIV atom.

crystal structureStereochemistryOxalic acidcyclo­hexyl­ammoniumorganotin(IV) compoundSalt (chemistry)Crystal structureMedicinal chemistryOxalateResearch CommunicationsCrystalchemistry.chemical_compoundMoietyGeneral Materials ScienceCoordination geometrychemistry.chemical_classificationCrystallographycis arrangementHydrogen bondoxalate ligandsGeneral ChemistryCondensed Matter PhysicschemistryQD901-999N—H...O hydrogen bondingN—H⋯O hydrogen bondingcyclohexylammoniumActa Crystallographica Section E: Crystallographic Communications
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