Search results for "bp"
showing 10 items of 672 documents
ROLE OF RNA BINDING PROTEIN IN THE NERVE CELL DIFFERENTIATION
2014
Synthesis of H1˚ and H3.3 histone proteins, in the developing rat brain, seems to be regulated mainly at the post-transcriptional level. Since regulation of RNA metabolism depends on a series of RNA-binding proteins (RBPs), we have been searching for RBPs involved in the post-transcriptional regulation of the H1˚ and H3.3 genes. Previously, we reported isolation, from a cDNA expression library, of an insert encoding a novel protein, the C-terminal half of which is identical to that of PEP-19, a brain-specific protein involved in calcium metabolism. The novel protein was called long PEP-19 isoform (LPI). We showed that LPI, as well as PEP-19, can bind H1˚ RNA. Since PEP19 and LPI contain a c…
Developing rat brain as well as cultured astrocytes contain H1° mRNA-protein complexes
2015
RNA-binding proteins (RBPs) regulate intracellular transport, pre-localization, stability, and translation of mRNAs [1]. We previously identified a set of proteins which interact with mRNAs encoding H1° and H3.3 histones [2-5]. All these proteins are probably part of a ribonucleoprotein particle [6]. Here we report the results of a more detailed study on the expression and intracellular localization of some of these RBPs, such as hnRNP K and A1, and Hsc70, during rat brain development and in cultured rat astrocytes. We also investigated the presence in the complexes of PIPPin/CSD-C2 protein. Affinity chromatography was performed as already described [6]. Preparation of total lysates and cel…
Age-dependent regulation of antioxidant genes by p38α MAPK in the liver
2018
p38α is a redox sensitive MAPK activated by pro-inflammatory cytokines and environmental, genotoxic and endoplasmic reticulum stresses. The aim of this work was to assess whether p38α controls the antioxidant defense in the liver, and if so, to elucidate the mechanism(s) involved and the age-related changes. For this purpose, we used liver-specific p38α-deficient mice at two different ages: young-mice (4 months-old) and old-mice (24 months-old). The liver of young p38α knock-out mice exhibited a decrease in GSH levels and an increase in GSSG/GSH ratio and malondialdehyde levels. However, old mice deficient in p38α had higher hepatic GSH levels and lower GSSG/GSH ratio than young p38α knock-…
Terapijas dārza izveides iespējas: Rīgas Psihiatrijas un Narkoloģijas centra Ambulatorās aprūpes centra “Veldre” piemērs
2019
Maģistra darbā ir izpētīti apstākļi, kas var mazināt plaisu starp ieguvumiem piemērotas dabas vides – terapijas dārzu – izmantošanā ārstniecības programmās, kuras balstās ļoti apjomīgos un vairāk kā 100 gadus ilgos plaši sazarotos zinātniskās izpētes rezultātos pasaulē, īpaši – psijiatrijā, un situāciju, kad Rīgas Psihiatrijas un Narkoloģijas centra (RPNC) iestāžu pilsētvides dabas teritorijas tiek ekstensīvi apsaimniekotas, un tāpēc to potenciāls netiek pilnvērtīgi izmntots veselības veicināšanā. Tēmas aktualitāti pamato strauja validētu ekoterapijas metožu attīstība pasaulē. Izpēti veido rīcībpētījums 3 posmos, kurā Rīgas Psihiatrijas un Narkoloģijas centra Ambulatorās aprūpes centrā “Vel…
Flanking regions determine the structure of the poly-glutamine homo- repeat in huntingtin through mechanisms common among glutamine-rich human protei…
2020
International audience; The causative agent of Huntington's disease, the poly-Q homo-repeat in the N-terminal region of huntingtin (httex1), is flanked by a 17-residue-long fragment (N17) and a proline-rich region (PRR), which promote and inhibit the aggregation propensity of the protein, respectively, by poorly understood mechanisms. Based on experimental data obtained from site-specifically labeled NMR samples, we derived an ensemble model of httex1 that identified both flanking regions as opposing poly-Q secondary structure promoters. While N17 triggers helicity through a promiscuous hydrogen bond network involving the side chains of the first glutamines in the poly-Q tract, the PRR prom…
Mboat7 down-regulation by hyper-insulinemia induces fat accumulation in hepatocytes.
2020
Background: Naturally occurring variation in Membrane-bound O-acyltransferase domain-containing 7 (MBOAT7), encoding for an enzyme involved in phosphatidylinositol acyl-chain remodelling, has been associated with fatty liver and hepatic disorders. Here, we examined the relationship between hepatic Mboat7 down-regulation and fat accumulation. Methods: Hepatic MBOAT7 expression was surveyed in 119 obese individuals and in experimental models. MBOAT7 was acutely silenced by antisense oligonucleotides in C57Bl/6 mice, and by CRISPR/Cas9 in HepG2 hepatocytes. Findings: In obese individuals, hepatic MBOAT7 mRNA decreased from normal liver to steatohepatitis, independently of diabetes, inflammatio…
The mitotic spindle protein SPAG5/Astrin connects to the Usher protein network postmitotically
2011
Abstract Background Mutations in the gene for Usher syndrome 2A (USH2A) are causative for non-syndromic retinitis pigmentosa and Usher syndrome, a condition that is the most common cause of combined deaf-blindness. To gain insight into the molecular pathology underlying USH2A-associated retinal degeneration, we aimed to identify interacting proteins of USH2A isoform B (USH2AisoB) in the retina. Results We identified the centrosomal and microtubule-associated protein sperm-associated antigen (SPAG)5 in the retina. SPAG5 was also found to interact with another previously described USH2AisoB interaction partner: the centrosomal ninein-like protein NINLisoB. Using In situ hybridization, we foun…
Activity and activation state of ribulose-1,5-bisphosphate carboxylase of spruce trees with varying degrees of damage relative to the occurrence of n…
1989
The aim was to determine whether a reduced carboxylation efficiency in needles of damaged spruce trees (Picea abies), is derived from a direct impairment of the ribulose-1,5-bisphosphate carboxylase (RuBP carboxylase) or there is an indirect inhibition of the RuBP carboxylase. In 1985, 1986 and 1987 measurements of RuBP carboxylase activity were carried out at three locations. Trees of different ages and degrees of damage were examined. RuBP carboxylase was assayed using both a rapid extraction method to determine the initial activity and an in vitro test after total activation to determine the total activity. The activation state was calculated as the ratio of initial activity to total act…
Rīcībpolitikas pārcelšana: Eiropas Ekonomikas zonas finanšu instrumenta gadījums
2015
Eiropas Ekonomikas zonas finanšu instrumenta mērķis ir sociālās un ekonomiskās nevienlīdzības mazināšana. Pētījumā apskatīti divu plānošanas periodu 2004.-2009 un 2009.- 2014 ietvaros īstenotie prioritārie virzieni, noteikta finansējuma piešķiršanas lietderība, veikta periodu analīze, kā arī sniegts pamatojums finansējuma turpmākai piešķiršanai. Pētījumā norādītie dati liecina par esošās situācijas uzlabojumiem, ļaujot noteikt prioritāros virzienus nākošo plānošanas periodu izstrādē. Maģistra darba centrālā problēma tiek ietverta darba hipotēzē - Rīcībpolitikas pārnesi Eiropas Ekonomikas zonas finanšu instrumenta kultūras programmu gadījumā regulē donorvalstu Norvēģijas, Lihtenšteinas un Is…
Selective Inhibition of STAT3 with Respect to STAT1: Insights from Molecular Dynamics and Ensemble Docking Simulations
2016
STAT3 protein, which is known to be involved in cancer development, is a promising target for anticancer therapy. Successful inhibitors of STAT3 should not affect an activity of closely related protein STAT1, which makes their development challenging. The mechanisms of selectivity of several existing STAT3 inhibitors are not clear. In this work, we studied molecular mechanisms of selectivity of 13 experimentally tested STAT3 inhibitors by means of extensive molecular dynamics and ensemble docking simulations. It is shown that all studied inhibitors bind to the large part of the protein surface in an unspecific statistical manner. The binding to the dimerization interface of the SH2 domain, …