Search results for "classification"

showing 10 items of 29475 documents

Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory

2020

Species inventories are essential to the implementation of conservation policies to mitigate biodiversity loss and maintain ecosystem services and their value to the society. This is particularly topical with respect to climate change and direct anthropogenic effects on Antarctic biodiversity, with the identification of the most at-risk taxa and geographical areas becoming a priority. Identification tools are often neglected and considered helpful only for taxonomists. However, the development of new online information technologies and computer-aided identification tools provides an opportunity to promote them to a wider audience, especially considering the emerging generation of scientists…

0106 biological sciencesComputer science[SDV]Life Sciences [q-bio]BiodiversityEvolution des espècesOceanography010603 evolutionary biology01 natural sciencesEcosystem servicesDatabaseKnowledge baseBiodiversity conservationOcéanographie physique et chimique14. Life underwaterGéologieComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsXper3Taxonomic keyEcologiebiologybusiness.industry010604 marine biology & hydrobiologyOdontasteridaeInformation technologyGeologyField guides15. Life on landbiology.organism_classificationData scienceKnowledge base13. Climate action[SDE]Environmental SciencesManagement systemComputer-aidedbusinessSoftwareAntarctic Science
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Benchmark database for fine-grained image classification of benthic macroinvertebrates

2018

Managing the water quality of freshwaters is a crucial task worldwide. One of the most used methods to biomonitor water quality is to sample benthic macroinvertebrate communities, in particular to examine the presence and proportion of certain species. This paper presents a benchmark database for automatic visual classification methods to evaluate their ability for distinguishing visually similar categories of aquatic macroinvertebrate taxa. We make publicly available a new database, containing 64 types of freshwater macroinvertebrates, ranging in number of images per category from 7 to 577. The database is divided into three datasets, varying in number of categories (64, 29, and 9 categori…

0106 biological sciencesComputer scienceta1172Sample (statistics)monitorointi02 engineering and technologyneuroverkot01 natural sciencesConvolutional neural network0202 electrical engineering electronic engineering information engineeringkonenäköfine-grained classification14. Life underwaterFine-grained classificationInvertebrateta113ta112Contextual image classificationbusiness.industry010604 marine biology & hydrobiologyDeep learningConvolutional Neural NetworksBenchmark databasedeep learningPattern recognitionDeep learningselkärangattomatvedenlaatu6. Clean waterkoneoppiminenBenthic zoneBenthic macroinvertebratesbiomonitoringSignal ProcessingBiomonitoringta1181lajinmääritys020201 artificial intelligence & image processingComputer Vision and Pattern RecognitionArtificial intelligenceWater qualitybusinessbenthic macroinvertebrates
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The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild

2013

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License.-- et al.

0106 biological sciencesConservation geneticsMalegenotype phenotype correlationGorillaComputingMilieux_LEGALASPECTSOFCOMPUTINGarginineGenoma humà01 natural sciencesOculocutaneous albinism type 4single nucleotide polymorphismAlbinismegenetic variabilityGorillaInbreedinggenetic conservationGenetics0303 health sciencesGenomebiologyarticlecopy number variationHigh-Throughput Nucleotide SequencingSLC45A2 geneGenomicszygosityOculocutaneous albinismFloquet de neu (Goril·la)AlbinismFemaleBiotechnologyamino acid substitutionResearch ArticleSLC45A2Gorilla gorilla gorillaHeterozygoteAlbinismMolecular Sequence Datacomparative genomic hybridizationgene sequenceConservation010603 evolutionary biology03 medical and health sciencesWestern lowland gorillabiology.animalmedicineGeneticsheterozygosityAnimalsAmino Acid Sequencegene030304 developmental biologygene identificationWhole genome sequencingnonhumanGorilla gorillaMembrane Transport ProteinsSequence Analysis DNA15. Life on landbiology.organism_classificationmedicine.diseaseGenòmicaData_GENERALMutationbiology.proteinGenèticaoculocutaneous albinismglycineMicrosatellite RepeatsBMC Genomics
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Does recognized genetic management in supportive breeding prevent genetic changes in life-history traits?

2014

International audience; Supportive breeding is one of the last resort conservation strategies to avoid species extinction. Management of captive populations is challenging because several harmful genetic processes need to be avoided. Several recommendations have been proposed to limit these deleterious effects, but empirical assessments of these strategies remain scarce. We investigated the outcome of a genetic management in a supportive breeding for the Houbara Bustard. At the phenotypic level, we found an increase over generations in the mean values of gamete production, body mass and courtship display rate. Using an animal model, we found that phenotypic changes reflected genetic changes…

0106 biological sciencesConservation geneticsquantitative genetics010603 evolutionary biology01 natural sciencesLife history theoryCaptive breedingGeneticsmedicineBustardEcology Evolution Behavior and SystematicsSelection (genetic algorithm)[SDV.GEN]Life Sciences [q-bio]/GeneticsCourtship displaybiologyEcology010604 marine biology & hydrobiologyOriginal ArticlesQuantitative geneticsbiology.organism_classificationmedicine.anatomical_structureconservation geneticsGameteta1181General Agricultural and Biological Sciencescaptive populations[ SDV.GEN ] Life Sciences [q-bio]/GeneticsDemographyEvolutionary Applications
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How to reconcile wood production and biodiversity conservation? The Pan-European boreal forest history gradient as an "experiment".

2018

There are currently competing demands on Europe's forests and the finite resources and services that they can offer. Forestry intensification that aims at mitigating climate change and biodiversity conservation is one example. Whether or not these two objectives compete can be evaluated by comparative studies of forest landscapes with different histories. We test the hypothesis that indicators of wood production and biodiversity conservation are inversely related in a gradient of long to short forestry intensification histories. Forest management data containing stand age, volume and tree species were used to model the opportunity for wood production and biodiversity conservation in five no…

0106 biological sciencesConservation of Natural ResourcesEnvironmental Engineering010504 meteorology & atmospheric sciencesForest managementSustainable forest managementBiodiversityManagement Monitoring Policy and LawForests010603 evolutionary biology01 natural sciencesTreesTaigaAnimalsWaste Management and Disposal0105 earth and related environmental sciencesWildlife conservationSwedenBiomass (ecology)EcologyWood productionbiologyAgroforestryNorwayForest ScienceTaigaScots pineForestryGeneral MedicineBiodiversitybiology.organism_classificationWoodEuropeGeographyJournal of environmental management
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A multidisciplinary analytical framework to delineate spawning areas and quantify larval dispersal in coastal fish

2019

International audience; Assessing larval dispersal is essential to understand the structure and dynamics of marine populations. However, knowledge about early-life dispersal is sparse, and so is our understanding of the spawning process, perhaps the most obscure component of biphasic life cycles. Indeed, the poorly known species-specific spawning modality and early-life traits, along with the high spatio-temporal variability of the oceanic circulation experienced during larval drift, hamper our ability to properly appraise the realized connectivity of coastal fishes. Here, we propose an analytical framework which combines Lagrangian modeling, network theory, otolith analyses and biogeograph…

0106 biological sciencesConservation of Natural ResourcesOceans and SeasPopulation DynamicsCoastal fishEcosystem ManagementConservationAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesFish natal originsmedicineMediterranean SeaAnimalsDiplodus vulgarisMarine ecosystem14. Life underwaterEcosystemOtolithMarine Protected AreaLagrangian Flow Network[SDU.OCEAN]Sciences of the Universe [physics]/Ocean Atmosphere[SDV.EE]Life Sciences [q-bio]/Ecology environmentFish natal originbiologyEcology010604 marine biology & hydrobiologyFishesMarine connectivityPelagic zoneGeneral MedicineDiplodusbiology.organism_classificationPollutionCoastal fishesCoastal fishemedicine.anatomical_structureLarvaBiological dispersalMarine protected areaModels-hydrodynamicsModels-hydrodynamic
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Combined effects of fishing and oil spills on marine fish: Role of stock demographic structure for offspring overlap with oil

2018

It has been proposed that the multiple pressures of fishing and petroleum activities impact fish stocks in synergy, as fishing-induced demographic changes in a stock may lead to increased sensitivity to detrimental effects of acute oil spills. High fishing pressure may erode the demographic structure of fish stocks, lead to less diverse spawning strategies, and more concentrated distributions of offspring in space and time. Hence an oil spill may potentially hit a larger fraction of a year-class of offspring. Such a link between demographic structure and egg distribution was recently demonstrated for the Northeast Arctic stock of Atlantic cod for years 1959–1993. We here estimate that this …

0106 biological sciencesConservation of Natural ResourcesOffspringFishingPopulationPopulation DynamicsFisheriesAquatic ScienceOceanographyFish stock010603 evolutionary biology01 natural scienceschemistry.chemical_compoundAnimalsComputer SimulationPetroleum PollutioneducationStock (geology)education.field_of_studybiologyArctic Regions010604 marine biology & hydrobiologyReproductionbiology.organism_classificationPollutionFisherychemistryArcticGadus morhuaEnvironmental sciencePetroleumAtlantic codEnvironmental Monitoring
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Protected areas buffer against harvest selection and rebuild phenotypic complexity

2020

14 pages, 6 figures, 4 tables.-- This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited

0106 biological sciencesConservation of Natural ResourcesSurvivalFisheries-induced selectionPopulationFisheriesCapture–recaptureSkagerrak010603 evolutionary biology01 natural sciencesLife history theoryMark and recaptureHomarus gammarusMarine protected areasVital ratesAnimalsBody SizeHumans14. Life underwaterSize structureeducationSelection (genetic algorithm)education.field_of_studyEcologybiologyEcologyNorway010604 marine biology & hydrobiologyfungiFishesbiology.organism_classificationNephropidaeProductivity (ecology)LobsterMarine protected areaVital ratesEcological Applications
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Antifungal and antimycotoxigenic activity of hydrolyzed goat whey on Penicillium spp: An application as biopreservation agent in pita bread

2020

Abstract Whey is a by-product of the cheese industry, yet it contains proteins that have a high nutritional value and are an important source of antifungal peptides. Food deterioration caused by toxigenic fungi is one of the challenges of food safety. In this context, trypsin was used to hydrolyse goat milk whey at 37. The resultant peptides were characterised by LC–ESI–TOF-MS. Antifungal activity of the goat milk whey hydrolysate (HGW) was determined against 10 toxigenic fungi from the genus Penicillium, in solid and liquid media. Furthermore, HGW was used as an ingredient for bread elaboration. Bread elaborated with HGW and inoculated with toxigenic fungi was included in a shelf-life stud…

0106 biological sciencesContext (language use)01 natural sciencesHydrolysateAntifungal peptideBioactive peptideMinimum inhibitory concentrationchemistry.chemical_compoundIngredient0404 agricultural biotechnology010608 biotechnologyWheyFood scienceMycotoxinchemistry.chemical_classificationbiologyShelf-lifedigestive oral and skin physiologyfood and beverages04 agricultural and veterinary sciencesBiopreservationbiology.organism_classificationToxigenic fungi040401 food sciencechemistryPenicilliumPropionateFood Science
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Large-scale distribution analysis of Antarctic echinoids using ecological niche modelling.

2012

Understanding the factors that determine the distribution of taxa at various spatial scales is a crucial challenge in the context of global climate change. This holds particularly true for polar marine biota that are composed of both highly adapted and vulnerable faunas. We analysed the distribution of 2 Antarctic echinoid species, Sterechinus antarcticus and S. neumayeri, at the scale of the entire Southern Ocean using 2 niche modelling procedures. The performance of distribution models was tested with regard to the known ecology of the species. The respective contributions of environmental parameters are discussed along with the putative roles played by biotic interactions and biogeograph…

0106 biological sciencesContext (language use)Aquatic ScienceHabitat suitability map010603 evolutionary biology01 natural sciences[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/EcosystemsGARPSea ice14. Life underwaterSouthern OceanEcology Evolution Behavior and SystematicsPolar frontEcological nichegeography[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologygeography.geographical_feature_categoryBiotic componentEcologybiologyEcology010604 marine biology & hydrobiologyEchinoidea15. Life on landbiology.organism_classificationSterechinus[ SDV.EE.ECO ] Life Sciences [q-bio]/Ecology environment/EcosystemsSterechinusOceanographyArctic13. Climate actionEchinoidea [Sea urchins]Biological dispersal[SDE.BE]Environmental Sciences/Biodiversity and EcologyMaxent
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