Search results for "classification"

showing 10 items of 29475 documents

The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest

2020

Background: Although native to North America, the invasion of the aphid-like grape phylloxera Daktulosphaira vitifoliae across the globe altered the course of grape cultivation. For the past 150 years, viticulture relied on grafting-resistant North American Vitis species as rootstocks, thereby limiting genetic stocks tolerant to other stressors such as pathogens and climate change. Limited understanding of the insect genetics resulted in successive outbreaks across the globe when rootstocks failed. Here we report the 294-Mb genome of D. vitifoliae as a basic tool to understand host plant manipulation, nutritional endosymbiosis, and enhance global viticulture. Results: Using a combination of…

0106 biological sciencesFil·loxeraPhysiology[SDV]Life Sciences [q-bio]Introduced speciesPlant Science01 natural sciencesGenomeGene duplicationsStructural BiologyVitislcsh:QH301-705.5ComputingMilieux_MISCELLANEOUS2. Zero hunger0303 health scienceseducation.field_of_studyHost plant interactionsGenomeEndosymbiosisbiologyfood and beveragesBiological SciencesBiological EvolutionGeneral Agricultural and Biological SciencesRootstockInfectionDaktulosphaira vitifoliaeBiotechnologyResearch ArticlePopulation010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyHemiptera03 medical and health sciencesGeneticsInsect pestsAnimalsPlagues d'insectesAdaptationBiological invasionsGenomeseducationPhylloxeraEcology Evolution Behavior and Systematics030304 developmental biologyObligateHuman GenomeViticulturaCell Biology15. Life on landbiology.organism_classificationBiologicalEffectorsClimate Actionlcsh:Biology (General)13. Climate actionEvolutionary biologyArthropod genomesPhylloxeraAdaptationIntroduced SpeciesInsectAnimal DistributionDevelopmental Biology
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Trends in summer presence of fin whales in the Western Mediterranean Sea Region: new insights from a long-term monitoring program

2020

Background The Mediterranean subpopulation of fin whale Balaenoptera physalus (Linnaeus, 1758) has recently been listed as Vulnerable by the IUCN Red List of threatened species. The species is also listed as species in need of strict protection under the Habitat Directive and is one of the indicators for the assessment of Good Environmental Status under the MSFD. Reference values on population abundance and trends are needed in order to set the threshold values and to assess the conservation status of the population. Methods Yearly summer monitoring using ferries as platform of opportunity was performed since 2008 within the framework of the FLT Med Network. Data were collected along sever…

0106 biological sciencesFin whale010504 meteorology & atmospheric sciencesConservation BiologyPopulationMarine BiologyDistributionAssessment01 natural sciencesMediterranean BasinGeneral Biochemistry Genetics and Molecular BiologyMediterranean seabiology.animalIUCN Red ListeducationTransect0105 earth and related environmental scienceseducation.field_of_studyBalaenopterabiologyEcologyWhale010604 marine biology & hydrobiologyGeneral NeuroscienceGeneral Medicinebiology.organism_classificationGeographyBiogeographyMediterranean seaConservation statusPhysical geographyTrendsGeneral Agricultural and Biological SciencesZoologyPeerJ
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Developing an orientation and cutting point determination algorithm for a trout fish processing system using machine vision

2019

Abstract Fish processing in small and medium fish supplying centers requires an intelligent system to operate on different sizes. Therefore, an image processing algorithm was developed to extract the proper head and belly cutting points according to the trout dimensions. The algorithm detects the fish orientation and location of pectoral, anal, pelvic, and caudal fins. In this study, each of the trout images was divided into slices along its length in order to segment the fins and extract cutting points. The channel ‘B’ of RGB color space was considered in both initial segmentation and fin detection stages among the examined channels of RGB, HSV, and L*a*b* color spaces. The back-belly and …

0106 biological sciencesFinbiologyOrientation (computer vision)ForestryImage processing04 agricultural and veterinary sciencesHSL and HSVHorticultureColor spacebiology.organism_classification01 natural sciencesComputer Science ApplicationsRGB color spaceTrout040103 agronomy & agriculture0401 agriculture forestry and fisheriesRGB color modelAgronomy and Crop ScienceAlgorithm010606 plant biology & botanyMathematicsComputers and Electronics in Agriculture
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Combination of Freezing, Low Sodium Brine and Cold Smoking on the Quality and Shelf-Life of Sea Bass (Dicentrarchus labrax L.) Fillets as a Strategy …

2021

Aquaculture is playing a leading role in both meeting the growing demand for seafood and increasing the sustainability of the fish production sector. Thus, innovative technologies that improve its sustainability, competitiveness, and safety are necessary for growth in the sector. This study aimed to develop cold smoked sea bass fillets from aquaculture. The aptitude of frozen and fresh fillets for cold smoking was investigated by processing both fresh and thawed fillets kept previously at &minus

0106 biological sciencesFish farmingFood spoilagefilletsShelf life01 natural scienceslow-salt productArticle0404 agricultural biotechnologyBriningAquacultureSettore AGR/20 - Zoocolture010608 biotechnologylcsh:ZoologyFood sciencesodium replacementlcsh:QL1-991Sea bassSettore BIO/06 - Anatomia Comparata E Citologialcsh:Veterinary medicineGeneral Veterinarybiology<i>Dicentrachus labrax</i>business.industryDicentrachus labraxfish quality04 agricultural and veterinary sciencesbiology.organism_classification040401 food scienceshelf-lifeaquacultureEnvironmental sciencelcsh:SF600-1100Animal Science and ZoologyDicentrarchusbusinessLow sodiumcold smokingAnimals
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Application of a new protocol to evaluate the benthic impacts of aquaculture: Colonization of experimental units for monitoring by polychaeta

2019

A range of different protocols and indices have been developed in recent years for the definition of Environmental Quality Standards in aquaculture. However, it can be difficult to compare these protocols or indices between different regions or different habitats due to spatial heterogeneity at different scales. We carried out a field study to estimate the effectiveness of experimental units (sediment-filled trays) as an environmental management tool. The experimental units were filled with two different sediments - sand and mud - and placed underneath two fish farm facilities for one month. Using polychaetes to assess the ecological status, AMBI and multidimensional analysis showed clear r…

0106 biological sciencesFish farmingGeneral Decision SciencesCapitella capitataAquacultureExperimental trays010501 environmental sciences010603 evolutionary biology01 natural sciencesAquacultureZoologíaEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesPolychaeteEcologybiologybusiness.industrybiology.organism_classificationSpatial heterogeneityFisheryAmphareteCapitellaBenthic zoneDefaunated sedimentEnvironmental sciencebusinessPolychaetesRecolonizationEcological Indicators
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Influence of dams on population persistence in Atlantic salmon (Salmo salar)

2016

Barriers to migration can negatively affect population persistence. To explore how dams can influence the viability of a diadromous fish, we developed an empirically based stochastic model to estimate per-capita population growth rate (r) and probability of population decline (Pr(r &lt; 0)). Our simulations incorporated life-history parameters common for many populations of Atlantic salmon (Salmo salar L., 1758), particularly in the southern part of the species range. Additionally, we explored the influence of individuals that reproduce more than once, i.e., “kelts”, on r and Pr(r &lt; 0). For the life-history scenarios examined here, dams are forecast to negatively affect persistence, eve…

0106 biological sciencesFish migrationeducation.field_of_studybiologyEcology010604 marine biology & hydrobiologyPopulationSpecies distributionZoologybiology.organism_classification010603 evolutionary biology01 natural sciencesGene flowPersistence (computer science)Population declinePopulation growthAnimal Science and Zoology14. Life underwaterSalmoeducationEcology Evolution Behavior and SystematicsCanadian Journal of Zoology
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Condition-dependent skipped spawning in anadromous brown trout (Salmo trutta)

2018

Repeat spawners of anadromous salmonids may contribute significantly to population resilience by providing multiple cohorts to both seawater and freshwater life stages. In this study, winter survival of sea trout (Salmo trutta Linnaeus, 1758) post spawners (kelts) was 89%. Sea survival increased linearly with female length with a return probability between 30% and 50%, whereas males attained a maximum return probability of 60% at 520 mm. Of the returning sea trout, 40% skipped spawning and they had significantly lower condition factor as kelts compared with those who returned after one summer. These results suggest that sex-specific differences in individual post-spawning growth–survival t…

0106 biological sciencesFish migrationeducation.field_of_studybiologyurogenital system010604 marine biology & hydrobiologyPopulationAquatic Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesLife stageFisheryBrown troutSalmoResilience (network)educationCondition dependentEcology Evolution Behavior and SystematicsCanadian Journal of Fisheries and Aquatic Sciences
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A finding at the Natural History Museum of Florence affords the holotype designation of Orchestia stephenseni Cecchini, 1928 (Crustacea: Amphipoda: T…

2017

The beach flea Orchestia stephenseni has been originally described by Cecchini twice (1928, 1929) from the La Spezia type locality (northern Tyrrhenian Sea, Italy), and successively re-described by Karaman (1973) and Iaciofano &amp; Lo Brutto (2016). 

0106 biological sciencesFleaAmphipodaZoology010603 evolutionary biology01 natural sciencesCrustacea Amphipoda TalitridaeCrustaceaAnimalsAmphipodaOrchestia stephenseniEcology Evolution Behavior and SystematicsTaxonomybiologyEcologyMuseums010604 marine biology & hydrobiologyHolotypeBiodiversitybiology.organism_classificationCrustaceanNatural historyItalyTalitridaeAnimal Science and ZoologyType locality
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Notulae to the Italian flora of algae, bryophytes, fungi and lichens: 8

2019

In this contribution, new data concerning algae, bryophytes, fungi, and lichens of the Italian flora are presented. It includes new records and confirmations for the algae genusChara, the bryophyte generaHomalia,Mannia, andTortella, the fungal generaCortinarius,Russula, andStereum, and the lichen generaCetrelia,Cladonia,Enterographa,Graphis,Lecanora,Lepraria,Multiclavula,Mycomicrothelia,Parmelia,Peltigera,Pleopsidium,Psora,Scytinium,Umbilicaria, andRhizocarpon.

0106 biological sciencesFloraAscomycota; Basidiomycota; Bryidae; Charophyceae; MarchantiidaeCharophyceaePlant Science010603 evolutionary biology01 natural sciencesBryidaeAlgaeAscomycotaAscomycota Basidiomycota Bryidae Charophyceae Marchantiidaelcsh:BotanyBotanyLichenAscomycota Basidiomycota Bryidae Charophyceae Marchantiidae HowlichensBryidaeEcology Evolution Behavior and SystematicsbiologyAscomycotaBasidiomycotaCharophyceaeBasidiomycotabiology.organism_classificationlcsh:QK1-989GeographyMarchantiidaeMarchantiidae HowMarchantiidae010606 plant biology & botany
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Notulae to the Italian flora of algae, bryophytes, fungi and lichens: 9

2020

In this contribution, new data concerning bryophytes, fungi, and lichens of the Italian flora are presented. It includes new records and confirmations for the bryophyte genera Encalypta, Grimmia, and Riccia, for the fungal genera Hericium, Inocybe, Inocutis, Pluteus, and Russula, and for the lichen genera Bryoria, Farnoldia, Hypocenomyce, Lecania, Paracollema, Peltigera, Sarcogyne, and Teloschistes.

0106 biological sciencesFloraJungermanniidaePlant Science010603 evolutionary biology01 natural sciencesBryidaeAscomycotaAlgaelcsh:BotanyJungermanniidaeBotanyLichenBryidaeEcology Evolution Behavior and SystematicsbiologyAscomycotaBasidiomycotaBasidiomycotabiology.organism_classificationlcsh:QK1-989GeographyMarchantiidaeMarchantiidaeAscomycota Basidiomycota Bryidae Jungermanniidae MarchantiidaeAscomycota; Basidiomycota; Bryidae; Jungermanniidae; Marchantiidae010606 plant biology & botany
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