Search results for "classification"

showing 10 items of 29475 documents

2017

Both effective population size and life history may influence the efficacy of purifying selection, but it remains unclear if the environment affects the accumulation of weakly deleterious nonsynonymous polymorphisms. We hypothesize that the reduced energetic cost of osmoregulation in brackish water habitat may cause relaxation of selective constraints at mitochondrial oxidative phosphorylation (OXPHOS) genes. To test this hypothesis, we analyzed 57 complete mitochondrial genomes of Pungitius pungitius collected from brackish and freshwater habitats. Based on inter- and intraspecific comparisons, we estimated that 84% and 68% of the nonsynonymous polymorphisms in the freshwater and brackish …

0106 biological sciences0301 basic medicineNonsynonymous substitutionGeneticseducation.field_of_studyMitochondrial DNAEcologyPopulationEuryhalineBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesGenetic load03 medical and health sciencesNegative selection030104 developmental biologyPungitiusEffective population size14. Life underwatereducationEcology Evolution Behavior and SystematicsNature and Landscape ConservationEcology and Evolution
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Morphological and molecular analysis of Henricia Gray, 1840 (Asteroidea: Echinodermata) from the Northern Atlantic Ocean

2017

0106 biological sciences0301 basic medicineNorth Atlantic OceanbiologyDNA-analyysiHenriciabiology.organism_classification010603 evolutionary biology01 natural sciencesbarcodingMolecular analysis03 medical and health sciences030104 developmental biologyOceanographymorfologiaAsteroideameritähdetta1181Animal Science and Zoologymolecular analysisHenriciaGray (horse)Ecology Evolution Behavior and SystematicsCOI and 16SZoological Journal of the Linnean Society
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The genus Cyclops (Copepoda, Cyclopoida) in Europe

2016

16 páginas, 23 figuras, 1 tabla, información suplementaria.

0106 biological sciences0301 basic medicineNuclear genebiologyPhylogenetic treeCytochrome bZoologyCyclopoidaCyclopsbiology.organism_classification010603 evolutionary biology01 natural sciences18S ribosomal RNA03 medical and health sciences030104 developmental biologyTaxonGeneticsAnimal Science and ZoologyTaxonomy (biology)Molecular BiologyEcology Evolution Behavior and Systematics
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2019

Parents can influence offspring dispersal through breeding site selection, competition, or by directly moving their offspring during parental care. Many animals move their young, but the potential role of this behavior in dispersal has rarely been investigated. Neotropical poison frogs (Dendrobatidae) are well known for shuttling their tadpoles from land to water, but the associated movements have rarely been quantified and the potential function of tadpole transport in dispersal has not been addressed. We used miniature radio-transmitters to track the movements of two poison frog species during tadpole transport, and surveyed pool availability in the study area. We found that parental male…

0106 biological sciences0301 basic medicineOffspringmedia_common.quotation_subjectZoologyRainforestBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesTadpoleCompetition (biology)03 medical and health sciences030104 developmental biologySpatial behaviorAnimal ecologyBiological dispersalPaternal careEcology Evolution Behavior and Systematicsmedia_commonEvolutionary Ecology
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Do mosses really exhibit so large distribution ranges? Insights from the integrative taxonomic study of the Lewinskya affinis complex (Orthotrichacea…

2019

The strikingly lower number of bryophyte species, and in particular of endemic species, and their larger distribution ranges in comparison with angiosperms, have traditionally been interpreted in terms of their low diversification rates associated with a high long-distance dispersal capacity. This hypothesis is tested here with Lewinskya affinis (≡ Orthotrichum affine), a moss species widely spread across Europe, North and East Africa, southwestern Asia, and western North America. We tested competing taxonomic hypotheses derived from separate and combined analyses of multilocus sequence data, morphological characters, and geographical distributions. The best hypothesis, selected by a Bayes …

0106 biological sciences0301 basic medicineOld WorldRange (biology)ZoologyBryophytaBiology010603 evolutionary biology01 natural sciencesBryopsida03 medical and health sciencesSpecies SpecificityGeneticsOrthotrichaceaeEndemismMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsGeographyOrthotricheaeDiscriminant AnalysisReproducibility of ResultsBayes TheoremAfrica Eastern15. Life on landbiology.organism_classificationMossBryopsidaEurope030104 developmental biologyLong-distance dispersalDiversificationNorth AmericaBiological dispersalBryophyteMolecular Phylogenetics and Evolution
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Multiple shifts to open habitats in Melastomateae (Melastomataceae) congruent with the increase of African Neogene climatic aridity

2018

International audience; AimAfrican Melastomateae (Melastomataceae) comprise c. 185 species occurring in closed or open habitats throughout sub-Saharan Africa. We sought to reconstruct biogeographical and habitat history, and shifts in diversification rates of African Melastomateae using a well-sampled, dated molecular phylogeny.LocationAmericas, sub-Saharan Africa, Madagascar, SE Asia.TaxonAngiosperms, Melastomataceae, African Melastomateae.MethodsPhylogenetic relationships were estimated based on an extensive sampling of New and Old World Melastomateae, using two nuclear and three plastid markers. Divergence times were estimated in BEAST based on three calibration priors under Bayesian unc…

0106 biological sciences0301 basic medicineOld WorlddiversificationMelastomataceaeBiogeography[SDV]Life Sciences [q-bio]divergence timeNeogene010603 evolutionary biology01 natural sciences03 medical and health sciencesopen habitatsclosed habitats[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEcology Evolution Behavior and Systematicsbiogeographyhabitat shiftsEcologybiologyEcology15. Life on landbiology.organism_classification030104 developmental biologyGeographyTaxonHabitatMolecular phylogeneticsAfricaMelastomataceaeBiological dispersalNeogenegrassland
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Barcoding of parasitoid wasps (Braconidae and Chalcidoidea) associated with wild and cultivated olives in the Western Cape of South Africa

2019

Wild and cultivated olives harbor and share a diversity of insects, some of which are considered agricultural pests, such as the olive fruit fly. The assemblage of olive-associated parasitoids and seed wasps is rich and specialized in sub-Saharan Africa, with native species possibly coevolving with their hosts. Although historical entomological surveys reported on the diversity of olive wasp species in the Western Cape Province of South Africa, no comprehensive study has been performed in the region in the molecular era. In this study, a dual approach combining morphological and DNA-based methods was used for the identification of adult specimens reared from olive fruits. Four species of B…

0106 biological sciences0301 basic medicineOlive fruit flyWaspsParasitismmedicine.disease_cause010603 evolutionary biology01 natural sciencesDNA barcodingParasitoid03 medical and health sciencesSouth AfricaOleaBotanyInfestationGeneticsmedicineAnimalsDNA Barcoding TaxonomicMolecular BiologyPhylogenybiologyfungiGeneral MedicineBiodiversityDNAbiology.organism_classification030104 developmental biologyGenetic distanceTaxonomy (biology)BraconidaeBiotechnologyGenome
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In-Field and Early Detection of Xylella fastidiosa Infections in Olive Using a Portable Instrument

2019

Xylella fastidiosa subsp. pauca (Xfp) is a gram-negative pathogenic bacteria responsible for serious diseases (Purcell, 2013) that inflicts considerable economic loss (Li et al., 2007; Luvisi et al., 2017). The pathogen has been linked to olive quick decline syndrome (OQDS). This devastating olive disease was first observed in Salento (Apulia, southeastern Italy) in 2009. Infected trees respond to Xfp infection with scattered desiccation of twigs and small branches in the upper crown, which extend to the rest of the canopy, showing the characteristic blight effect. The disease causes tree death within a few years from the onset of symptoms (Martelli, 2016). The primary agronomic procedure f…

0106 biological sciences0301 basic medicineOpinionmedia_common.quotation_subjectEarly detectionPlant BiologyPlant Sciencelcsh:Plant culture01 natural sciencesolive03 medical and health sciencesPhysics and Astronomy (all)olive quick decline syndromelcsh:SB1-1110media_commonXylella fastidiosabiologyin-field detectionArtbiology.organism_classificationIn-field detection; Olive; Olive quick decline syndrome; Portable instrument; Xylella fastidiosa030104 developmental biologyportable instrumentXylella fastidiosaHumanities010606 plant biology & botanyFrontiers in Plant Science
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Loncomelos koprulense (Asparagaceae), a new species from southern Turkey

2021

A new species, Loncomelos koprulense (Asparagaceae), is described and illustrated from southern Turkey. It is a very rare endemic species growing on small semi-rocky escarpments within the Köprülü Kanyon in the province of Antalya. Morphologically for its hairy leaves, L. koprulense shows some relationships with L. malatyanum and L. tardum, species localized in Anatolia too. The chromosome number of the new species is 2n = 2x = 22. Geographical distribution map for L. koprulense, L. malatyanum and L. tardum is provided.

0106 biological sciences0301 basic medicineOrnithogaleaeChromosome numberTurkeyLiliopsidaZoologyAsparagalesPlant ScienceOrnithogalum s.l.BiologyDistributionMediterranean01 natural sciences03 medical and health sciencesDistribution karyology Mediterranean Ornithogalum s.l. Ornithogaleae taxonomykaryologytaxonomyAsparagaceaeLoncomelosHyacinthaceaeEndemismPlantaeEcology Evolution Behavior and SystematicsAsparagaceaeSettore BIO/02 - Botanica SistematicaBotanyKaryotype030108 mycology & parasitologybiology.organism_classificationTracheophytaQK1-989Taxonomy (biology)Loncomelos010606 plant biology & botanyResearch ArticlePhytoKeys
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Putting Parasemia in its phylogenetic place: a molecular analysis of the subtribe Arctiina (Lepidoptera)

2016

Despite being popular among amateur and professional lepidopterologists and posing great opportunities for evolutionary research, the phylogenetic relationships of tiger moths (Erebidae: Arctiinae) are not well resolved. Here we provide the first phylogenetic hypothesis for the subtribe Arctiina with the basic aim of clarifying the phylogenetic position of the Wood Tiger Moth Parasemia plantaginis Hübner, a model species in evolutionary ecology. We sampled 89 species in 52 genera within Arctiina s.l., 11 species of Callimorphina and two outgroup species. We sequenced up to seven nuclear genes (CAD, GAPDH, IDH, MDH, Ef1𝛼, RpS5, Wingless) and one mitochondrial gene (COI) including the barcod…

0106 biological sciences0301 basic medicineOroncusZoologyArctiinaeAcerbia010603 evolutionary biology01 natural sciencesErebidae03 medical and health sciencesChelismolecular analysisEpicalliaEcology Evolution Behavior and Systematicsbiologyta1184fylogenetiikkaArctiinawood tiger mothArctia festivabiology.organism_classificationphylogeneticsArctia030104 developmental biologyInsect Science1181 Ecology evolutionary biologytiger mothsta1181Parasemia plantaginisSystematic Entomology
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