Search results for "clone"

showing 10 items of 312 documents

Modulation of accessory cell function of immortalized bone marrow-derived macrophages by granulocyte/macrophage colony-stimulating factor.

1993

To generate cloned macrophage populations with sensitivity towards granulocyte/macrophage colony-stimulating factor (GM-CSF), bone marrow-derived macrophages (BMM phi) were immortalized by transformation with SV40. A panel of transformed clones was established. The majority of clones represented independently derived transformants, as evidenced by restriction fragment length polymorphism using genomic DNA digested with EcoRI and TaqI and the 5.2 kb SV40 DNA for hybridization analysis. The cells belong to the macrophage lineage according to several criteria, e.g. the presence of nonspecific esterase, their phagocytic capacity and their morphology. Many clones were potent antigen-presenting c…

Microbiology (medical)ImmunologyAntigen presentationAntigen-Presenting CellsBone Marrow CellsSimian virus 40BiologyGranulocyteMicePhagocytosismedicineImmunology and AllergyMacrophageAnimalsAntigen-presenting cellCells CulturedMice Inbred C3HMacrophage Colony-Stimulating FactorMacrophagesHistocompatibility Antigens Class IIGranulocyte-Macrophage Colony-Stimulating FactorGeneral MedicineBlotting NorthernCell Transformation ViralMolecular biologyClone CellsBlotmedicine.anatomical_structureGranulocyte macrophage colony-stimulating factorCell cultureImmunologyDNA ViralBone marrowDNA ProbesPolymorphism Restriction Fragment Lengthmedicine.drugMedical microbiology and immunology
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Characterization of Listeria monocytogenes isolates from human listeriosis cases in Italy.

2009

ABSTRACT The objective of this study was to characterize by serotyping, pulsed-field gel electrophoresis (PFGE), and PCR amplification of virulence genes and markers of epidemic clones I, II, and III (ECI, ECII, and ECIII) 54 human isolates from apparently sporadic cases of infection occurring in the Lombardy region and in the province of Florence, Tuscany, Italy, in the years 1996 to 2007. Listeria monocytogenes isolates were provided by the clinical microbiology laboratories of the Lombardy region and the “Careggi” Hospital of Florence, Tuscany, Italy. Serotyping, PFGE after digestion with the AscI and ApaI enzymes, and PCR amplification for the inlA , inlC , and inlJ genes and ECI, ECII,…

Microbiology (medical)SerotypeGenotypeVirulence FactorsEpidemiologyepidemic clonesBiologySettore MED/42 - Igiene Generale E Applicatamedicine.disease_causePolymerase Chain Reactionlaw.inventionMicrobiologyListeria monocytogeneslawPregnancyGenotypehuman casemedicinePulsed-field gel electrophoresisCluster AnalysisHumansListeriosisSerotypingPolymerase chain reactionListeria monocytogeneAgedMolecular EpidemiologyMolecular epidemiologyInfant NewbornPFGEVirologyDNA FingerprintingListeria monocytogenesSubtypingBacterial Typing TechniquesElectrophoresis Gel Pulsed-FieldDNA profilingItalyFemaleJournal of clinical microbiology
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Identification of Shigella sonnei biotype g isolates carrying class 2 integrons in Italy in 2001-2003

2005

ABSTRACT Phenotyping and genotyping have been carried out on 64 epidemic and sporadic isolates of Shigella sonnei identified in Italy in the years 2001 to 2003. Class 2 integron carriage has been also investigated. Isolates from four of the five outbreaks and four of six sporadic cases were biotype g , pulsed-field gel electrophoresis type B, and class 2 integron positive, suggesting emergence and spread of an epidemic clone in Italy.

Microbiology (medical)clone (Java method)Genotypebiotype gSettore MED/42 - Igiene Generale e ApplicataOUTBREAKShigella sonneiIntegronPolymerase Chain Reactionlaw.inventionDisease OutbreaksIntegronslawGenotypeHumansShigella sonneiChildGenotypingPolymerase chain reactionDNA PrimersDysentery BacillaryGeneticsShigella sonnei ; epidemiology ; biotype g ; class 2 integrons ; ItalyRefugeesANTIMICROBIAL RESISTANCEbiologyBase SequenceOutbreakbiochemical phenomena metabolism and nutritionbacterial infections and mycosesclass 2 integronsVirologyElectrophoresis Gel Pulsed-FieldRESTRICTION PATTERNSCarriagePhenotypeItalybiology.proteinbacteriaepidemiology
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Is there a widespread clone of Serratia marcescens producing outbreaks worldwide?

2021

[Background]: Serratia marcescens frequently causes outbreaks in healthcare settings. There are few studies using high-throughput sequencing (HTS) that analyse S. marcescens outbreaks. We present the analysis of two outbreaks in neonatal intensive care units (NICUs) in hospitals from the Comunitat Valenciana (CV, Spain) and the impact of using different reference genomes.

Microbiology (medical)clone (Java method)Mapping referenceMicrobial Sensitivity Tests030501 epidemiologyGenomeDNA sequencingNICU outbreaksDisease OutbreaksSerratia Infections03 medical and health sciencesIntensive Care Units NeonatalIntensive careHumansMedicineSerratia marcescensGeneticsCross Infection0303 health sciencesHigh-throughput sequencingbiology030306 microbiologybusiness.industryStrain (biology)Infant NewbornOutbreakGeneral Medicinebiology.organism_classificationClone CellsInfectious DiseasesSpainHealthcare settingsSerratia marcescens0305 other medical sciencebusinessNosocomial outbreaks
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A novel rat CVB1-VP1 monoclonal antibody 3A6 detects a broad range of enteroviruses

2018

AbstractEnteroviruses (EVs) are common RNA viruses that cause diseases ranging from rash to paralytic poliomyelitis. For example, EV-A and EV-C viruses cause hand-foot and mouth disease and EV-B viruses cause encephalitis and myocarditis, which can result in severe morbidity and mortality. While new vaccines and treatments for EVs are under development, methods for studying and diagnosing EV infections are still limited and therefore new diagnostic tools are required. Our aim was to produce and characterize new antibodies that work in multiple applications and detect EVs in tissues and in vitro. Rats were immunized with Coxsackievirus B1 capsid protein VP1 and hybridomas were produced. Hybr…

Models Molecular0301 basic medicineBiolääketieteet - BiomedicineProtein Conformationmedicine.drug_classImmunoelectron microscopylcsh:MedicineEnzyme-Linked Immunosorbent AssayCoxsackievirusmedicine.disease_causeMonoclonal antibodyenterovirusesArticleEpitopeEpitopesMice03 medical and health sciencesProtein DomainsEnterovirus InfectionsmedicineantibodiesAnimalsHumanslcsh:ScienceMultidisciplinary030102 biochemistry & molecular biologybiologyPolioviruslcsh:Rvasta-aineetAntibodies Monoclonalbiology.organism_classificationAntibodies NeutralizingImmunohistochemistryVirologyEnterovirus B HumanRats3. Good healthenterovirukset030104 developmental biologyKasvibiologia mikrobiologia virologia - Plant biology microbiology virologybiology.proteinImmunohistochemistrylcsh:QCapsid ProteinsAntibodyClone (B-cell biology)Protein BindingScientific Reports
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Mapping Susceptibility to Debris Flows Triggered by Tropical Storms: A Case Study of the San Vicente Volcano Area (El Salvador, CA)

2021

In this study, an inventory of storm-triggered debris flows performed in the area of the San Vicente volcano (El Salvador, CA) was used to calibrate predictive models and prepare a landslide susceptibility map. The storm event struck the area in November 2009 as the result of the simultaneous action of low-pressure system 96E and Hurricane Ida. Multivariate Adaptive Regression Splines (MARS) was employed to model the relationships between a set of environmental variables and the locations of the debris flows. Validation of the models was performed by splitting 100 random samples of event and non-event 10 m pixels into training and test subsets. The validation results revealed an excellent (…

Multivariate Adaptive Regression Splines (MARS)Multivariate adaptive regression splineslow-pressure system 96EReceiver operating characteristicSettore GEO/04 - Geografia Fisica E GeomorfologiaStormLandslideMars Exploration ProgramDebrisDebris flowdebris flowsSan Vicente volcanodebris flowEl Salvadorlandslide susceptibilitytropical storm IdaTropical cycloneGeomorphologyGeologyEarth
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Identification of a novel type of ITD mutations located in nonjuxtamembrane domains of the FLT3 tyrosine kinase receptor

2009

Abstract In acute myeloid leukemia (AML), internal tandem duplications (ITDs) of the juxtamembrane (JM) of FLT3 have been shown to play a crucial role in driving proliferation and survival of the leukemic clone. Here, we report the identification of FLT3_ITD mutations located in non-JM domains of the FLT3-receptor. This novel type of FLT3_ITD mutation was found in 216 of 753 (28.7%) of unselected FLT3_ITD-positive AML cases. An FLT3 receptor harbouring a prototypic non-JM ITD (FLT3_ITD627E) mediated constitutive phosphorylation of FLT3 and of STAT5, suggesting that non-JM ITDs confer constitutive activation of the receptor. FLT3_ITD627E induced transformation of hematopoietic 32D cells and …

MutationImmunologyClone (cell biology)MedizinMyeloid leukemiaCell BiologyHematologyBiologymedicine.disease_causeBiochemistryMolecular biologyReceptor tyrosine kinasehemic and lymphatic diseasesTrk receptormedicinebiology.proteinPhosphorylationReceptorSTAT5
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Life Cycle Study of a Diabatic Rossby Wave as a Precursor to Rapid Cyclogenesis in the North Atlantic—Dynamics and Forecast Performance

2011

Monthly Weather Review, 139 (6)

North Atlantic OceanAtmospheric ScienceCyclogenesis/cyclolysisBaroclinityRossby waveNumerical weather predictionRossby waves; Cyclogenesis/cyclolysis; North Atlantic Ocean; Numerical weather prediction; DynamicsForcing (mathematics)Rossby wavesDynamicsPotential vorticityMesoscale convective vortexClimatologyCyclogenesisExtratropical cycloneTropical cycloneGeologyMonthly Weather Review
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Revising midlatitude summer temperatures back to A.D. 600 based on a wood density network

2015

Annually resolved and millennium-long reconstructions of large-scale temperature variability are primarily composed of tree ring width (TRW) chronologies. Changes in ring width, however, have recently been shown to bias the ratio between low- and high-frequency signals. To overcome limitations in capturing the full spectrum of past temperature variability, we present a network of 15 maximum latewood density (MXD) chronologies distributed across the Northern Hemisphere extratropics. Independent subsets of continental-scale records consistently reveal high MXD before 1580 and after 1910, with below average values between these periods. Reconstructed extratropical summer temperatures reflect n…

Northern HemisphereTree ringsClimate changeG Geography (General)Dendroclimatology3rd-DASAtmospheric sciencesAtmosphereMaximum latewood densityVolcanic coolingGeophysicsMillennial reconstructionMiddle latitudesClimatologyPaleoclimatologyG1Extratropical cycloneDendrochronologyLittle Ice AgeGeneral Earth and Planetary SciencesBeta valueGeology
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Predicting the landslides triggered by the 2009 96E/Ida tropical storms in the Ilopango caldera area (El Salvador, CA): optimizing MARS-based model b…

2019

The main topic of this research was to evaluate the effect in the performance of stochastic landslide susceptibility models, produced by differences between the triggering events of the calibration and validation datasets. In the Caldera Ilopango area (El Salvador), MARS (multivariate adaptive regression splines)-based susceptibility modeling was applied using a set of physical–environmental predictors and two remotely recognized landslide inventories: one dated at 2003 (1503 landslides), which was the result of a normal rainfall season, and one which was produced by the combined effect of the Ida hurricane and the 96E tropical depression in 2009 (2237 landslides). Both the event inventorie…

OutcropCalibration (statistics)Settore GEO/04 - Geografia Fisica E Geomorfologia0208 environmental biotechnologySoil SciencePyroclastic rock02 engineering and technology010501 environmental sciences01 natural sciencesEnvironmental ChemistryCalderaTemporal validation0105 earth and related environmental sciencesEarth-Surface ProcessesWater Science and TechnologyIda hurricaneGlobal and Planetary ChangeMultivariate adaptive regression splinesMARSGeologyLandslideCaldera Ilopango (El Salvador)Mars Exploration ProgramLandslide susceptibilityPollution020801 environmental engineeringPhysical geographyTropical cycloneGeology
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