Search results for "complement"

showing 10 items of 2113 documents

Characterization and DNA-binding properties of GRF, a novel monomeric binding orphan receptor related to GCNF and betaFTZ-F1

1999

0014-2956 (Print) Comparative Study Journal Article Research Support, Non-U.S. Gov't; A PCR approach has been used to isolate, from Bombyx mori, a cDNA encoding a novel orphan receptor (GRF) that is most closely related to Bombyx betaFTZ-F1 and to the vertebrate germ cell nuclear factor. The major GRF mRNA is detected in most tissues as an 8-kb transcript whose amount follows the circulating ecdysteroid concentration with a delay. The expression pattern of GRF is similar to that of the Bombyx homologue of the Drosophila early-late gene DHR3, and precedes that of betaFTZ-F1 in all stages and tissues examined. The GRF protein is thus likely to be required in many tissues, but in a temporally …

Transcription GeneticReceptors Cytoplasmic and NuclearFushi Tarazu Transcription FactorsSequence HomologyGenes InsectDevelopmental/drug effectsSteroidogenic Factor 1BiochemistryBombyx/*chemistry/growth & developmentDNA/*metabolismNuclear Receptor Subfamily 6 Group A Member 1ReceptorsCloning MolecularReceptorRegulation of gene expressionOrphan receptorbiologyGene Expression Regulation DevelopmentalDNA-Binding ProteinsEcdysterone/pharmacologyAmino AcidEcdysteroneInsect Proteins/genetics/*isolation & purification/metabolismInsect ProteinsRecombinant Fusion Proteins/metabolismTranscriptionProtein StructureRecombinant Fusion ProteinsGerm cell nuclear factorMolecular Sequence DataGeneticComplementary DNAAnimalsAmino Acid SequenceBinding siteBombyxHomeodomain ProteinsBinding Sitespurification/metabolismSequence Homology Amino AcidBase SequencefungiMolecularCytoplasmic and Nuclear/chemistryDNABombyxbiology.organism_classificationMolecular biologyProtein Structure TertiaryTranscription Factors/chemistry/genetics/*isolation &Nuclear receptorGene Expression RegulationGenesDNA-Binding Proteins/chemistry/genetics/*isolation &InsectSequence AlignmentTertiaryTranscription FactorsCloning
researchProduct

Ethylene modulates gene expression in cells of the marine sponge Suberites domuncula and reduces the degree of apoptosis.

1999

Sponges (phylum Porifera) live in an aqueous milieu that contains dissolved organic carbon. This is degraded photochemically by ultraviolet radiation to alkenes, particularly to ethylene. This study demonstrates that sponge cells (here the demosponge Suberites domuncula has been used), which have assembled to primmorphs, react to 5 microM ethylene with a significant up-regulation of intracellular Ca(2+) concentration and with a reduction of starvation-induced apoptosis. In primmorphs from S. domuncula the expression of two genes is up-regulated after exposure to ethylene. The cDNA of the first gene (SDERR) isolated from S. domuncula encodes a potential ethylene-responsive protein, termed ER…

Transcriptional ActivationEthyleneMolecular Sequence DataApoptosisMarine BiologyBiochemistryEvolution Molecularchemistry.chemical_compoundComplementary DNAGene expressionBotanyAnimalsAmino Acid SequenceCloning MolecularMolecular BiologyGenePlant Proteinschemistry.chemical_classificationbiologySequence Homology Amino AcidKinaseProteinsCell BiologySequence Analysis DNAEthylenesbiology.organism_classificationAmino acidPoriferaSuberites domunculaSpongechemistryBiochemistryGene Expression RegulationProtein BiosynthesisCalcium-Calmodulin-Dependent Protein KinasesCalcium-Calmodulin-Dependent Protein Kinase Type 2Food DeprivationSignal TransductionThe Journal of biological chemistry
researchProduct

Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery

2004

12 páginas, 7 figuras, 1 tabla. Material suplementario en: https://doi.org/10.1016/S0092-8674(03)01025-0. The SUS1 sequences have been deposited in GenBank with the accession number AY278445.

Transcriptional ActivationNucleocytoplasmic Transport ProteinsDNA ComplementarySaccharomyces cerevisiae ProteinsMolecular Sequence DataActive Transport Cell NucleusPorinsRNA polymerase IIBiologyGeneral Biochemistry Genetics and Molecular BiologyFungal ProteinsTranscription (biology)AcetyltransferasesGene Expression Regulation FungalYeastsGene expressionGenes RegulatorTranscriptional regulationAmino Acid SequenceRNA MessengerNuclear proteinPromoter Regions GeneticHistone AcetyltransferasesRegulation of gene expressionCell NucleusBase SequenceBiochemistry Genetics and Molecular Biology(all)Nuclear ProteinsRNA-Binding ProteinsMolecular biologyCell biologySAGA complexRibonucleoproteinsbiology.proteinNuclear PoreGenes LethalChromatin immunoprecipitation
researchProduct

The modulator is a constitutive enhancer of a developmentally regulated sea urchin histone H2A gene.

2002

Going back to the late 1970s and early 1980s, we trace the Xenopus oocyte microinjection experiments that led to the emergence of the concept of “modulator”. The finding that the modulator could transactivate transcription from far upstream and in either orientation suggested that a new genetic element, different from the classical prokaryotic promoter sequences, had been discovered. This particular enhancer transactivates transcription of the sea urchin early (α) histone H2A gene which is regulated in early sea urchin development. We summarise the data from sea urchin microinjection experiments that confirm and extend the results obtained with Xenopus oocytes. We conclude that the H2A enha…

Transcriptional Activationanimal structuresDNA ComplementaryTranscription GeneticXenopusMolecular Sequence DataXenopusDown-RegulationInsulator (genetics)General Biochemistry Genetics and Molecular BiologyHistonesTranscription (biology)biology.animalHistone H2ANucleosomeAnimalsHumansEnhancerSea urchin3' Untranslated RegionsbiologyBase SequenceModels GeneticGene Expression Regulation Developmentalbiology.organism_classificationMolecular biologyCell biologyChromatinSea Urchinsembryonic structures5' Untranslated RegionsBioEssays : news and reviews in molecular, cellular and developmental biology
researchProduct

Deciphering the Early Mouse Embryo Transcriptome by Low-Input RNA-Seq

2020

Early preimplantation embryos are precious and scarce samples that contain limited numbers of cells, which can be problematic for quantitative gene expression analyses. Nonetheless, low-input genome-wide techniques coupled with cDNA amplification steps have become a gold standard for RNA profiling of as minimal as a single blastomere. Here, we describe a single-cell/single-embryo RNA sequencing (RNA-seq) method, from embryo collection to sample validation steps prior to DNA library preparation and sequencing. Key quality controls and external Spike-In normalization approaches are also detailed.

TranscriptomeLibraryComplementary DNAGene expressionRNARNA-SeqEmbryoBlastomereComputational biologyBiology
researchProduct

313: A cDNA-based assay for donor-chimerism analysis of epidermal langerhans cells

2007

Transplantationsurgical procedures operativeimmune system diseasesbusiness.industryComplementary DNADonor chimerismMedicineHematologybusinessMolecular biologyBiology of Blood and Marrow Transplantation
researchProduct

Aberrant splicing of the Drosophila melanogaster phenylalanine hydroxylase pre-mRNA caused by the insertion of a B104/roo transposable element in the…

1999

Abstract We report the insertion of the transposable element B104 in the Phenylalanine hydroxylase gene of the Drosophila mutant Henna-recessive 3 . Its presence alters the Phenylalanine hydroxylase splicing pattern, producing at least two aberrant mRNAs which contain part of the B104 sequence interrupting the coding region. This aberrant splicing is provoked by the use of a cryptic donor site encoded by the B104 3′ long terminal repeat in combination with either the gene intron 3 acceptor site or a novel acceptor site generated by the target duplication caused by transposition. One of them, referred as mRNA type 1, encodes a truncated protein that could be predictably non-functional. In mR…

Transposable elementDNA ComplementaryPhenylalanine hydroxylaseMolecular Sequence DataGenes InsectBiologyBiochemistryRNA PrecursorsAnimalsCoding regionAmino Acid SequenceMolecular BiologyGeneBase SequenceIntronPhenylalanine HydroxylaseExonsTryptophan hydroxylaseMolecular biologyAlternative SplicingMutagenesis InsertionalDrosophila melanogasterInsect ScienceRNA splicingDNA Transposable Elementsbiology.proteinPrecursor mRNAInsect Biochemistry and Molecular Biology
researchProduct

Common genomic structure for the Lepidoptera cadherin-like genes.

2005

A cadherin-like protein present in the midgut epithelial cells of Lepidoptera is associated with insect resistance to Bacillus thuringiensis Cry toxins. We describe for the first time the genes that encode the cadherin-like proteins in Ostrinia nubilalis, Helicoverpa armigera, and Bombyx mori, and analyze their organization. These genes encompass 19.6 kb, 20.0 kb, and 41.8 kb of genomic DNA, respectively, and despite the size heterogeneity, they are all composed of 35 exons that are linked by 34 introns. In contrast to the high variability noted for the sizes of the introns, the sizes of the coding exons were almost completely preserved among the three species, because the intronic sequence…

Transposable elementSequence analysisBiologyPolymerase Chain ReactionEvolution MolecularExonTandem repeatComplementary DNAGeneticsCell AdhesionAnimalsCloning MolecularGene3' Untranslated RegionsGeneticsfungiIntronComputational BiologyGeneral MedicineExonsCadherinsIntronsLepidopteragenomic DNA5' Untranslated RegionsSequence AnalysisGene
researchProduct

Cytotoxic activity of secondary metabolites derived from Artemisia annua L. towards cancer cells in comparison to its designated active constituent a…

2010

Artemisia annua L. (sweet wormwood, qinhao) has traditionally been used in Chinese medicine. The isolation of artemisinin from Artemisia annua and its worldwide accepted application in malaria therapy is one of the showcase success stories of phytomedicine during the past decades. Artemisinin-type compounds are also active towards other protozoal or viral diseases as well as cancer cells in vitro and in vivo. Nowadays, Artemisia annua tea is used as a self-reliant treatment in developing countries. The unsupervised use of Artemisia annua tea has been criticized to foster the development of artemisinin resistance in malaria and cancer due to insufficient artemisinin amounts in the plant as c…

Trypanosoma brucei bruceiArtemisia annuaPharmaceutical ScienceArtemisia annuaPharmacologyHeLachemistry.chemical_compoundPhytomedicineParasitic Sensitivity TestsScopoletinparasitic diseasesDrug DiscoverymedicineHumansArtemisininOligonucleotide Array Sequence AnalysisPharmacologyScopoletinEucalyptolDose-Response Relationship DrugMolecular StructurebiologyPlant Extractsfood and beveragesCyclohexanolsbiology.organism_classificationAntineoplastic Agents PhytogenicTrypanocidal AgentsArtemisininsBioactive compoundEucalyptolComplementary and alternative medicinechemistryDrug Resistance NeoplasmCancer cellMonoterpenesMolecular MedicineDrug Screening Assays AntitumorHeLa Cellsmedicine.drugPhytomedicine
researchProduct

Construction and expression of a dual vector for chemo-enzymatic synthesis of plant indole alkaloids inEscherichia coli

2010

A dual vector (pQE-70-STR1-SG) containing coding regions of strictosidine synthase (STR1, EC 4.3.3.2) and strictosidine glucosidase (SG, EC 3.2.1.105) from the Indian medicinal plant Rauvolfia serpentina was constructed. Functional expression of the vector in Escherichia coli cells (M15 strain) was proven by isolation of prepurified enzyme extracts, which show both STR1 and SG activities. Incubation of the enzyme in the presence of tryptamine and secologanin delivered the indole alkaloid cathenamine, demonstrating functional co-expression of both STR1- and SG-cDNAs. Cathenamine reduction by sodium borohydride leading to tetrahydroalstonine revealed the chemo-enzymatic indole alkaloid synthe…

TryptamineDNA ComplementaryStrictosidine synthasePlant Sciencemedicine.disease_causeBiochemistryGene Expression Regulation EnzymologicRauwolfiaIndole AlkaloidsAnalytical Chemistrychemistry.chemical_compoundGene Expression Regulation PlantRauvolfia serpentinaCarbon-Nitrogen LyasesEscherichia colimedicineCloning MolecularEscherichia coliPlant ProteinsIndole testchemistry.chemical_classificationMolecular StructurebiologyIndole alkaloidOrganic Chemistrybiology.organism_classificationSecologanin Tryptamine AlkaloidsEnzymechemistryBiochemistrybiology.proteinSecologaninGlucosidasesNatural Product Research
researchProduct