Search results for "computer"
showing 10 items of 30657 documents
Managing for resilience: an information theory-based approach to assessing ecosystems
2016
Ecosystems are complex and multivariate; hence, methods to assess the dynamics of ecosystems should have the capacity to evaluate multiple indicators simultaneously. Most research on identifying leading indicators of regime shifts has focused on univariate methods and simple models which have limited utility when evaluating real ecosystems, particularly because drivers are often unknown. We discuss some common univariate and multivariate approaches for detecting critical transitions in ecosystems and demonstrate their capabilities via case studies. Synthesis and applications. We illustrate the utility of an information theory-based index for assessing ecosystem dynamics. Trends in this inde…
Efficient estimation of generalized linear latent variable models.
2019
Generalized linear latent variable models (GLLVM) are popular tools for modeling multivariate, correlated responses. Such data are often encountered, for instance, in ecological studies, where presence-absences, counts, or biomass of interacting species are collected from a set of sites. Until very recently, the main challenge in fitting GLLVMs has been the lack of computationally efficient estimation methods. For likelihood based estimation, several closed form approximations for the marginal likelihood of GLLVMs have been proposed, but their efficient implementations have been lacking in the literature. To fill this gap, we show in this paper how to obtain computationally convenient estim…
Natural Selection Fails to Optimize Mutation Rates for Long-Term Adaptation on Rugged Fitness Landscapes
2008
The rate of mutation is central to evolution. Mutations are required for adaptation, yet most mutations with phenotypic effects are deleterious. As a consequence, the mutation rate that maximizes adaptation will be some intermediate value. Here, we used digital organisms to investigate the ability of natural selection to adjust and optimize mutation rates. We assessed the optimal mutation rate by empirically determining what mutation rate produced the highest rate of adaptation. Then, we allowed mutation rates to evolve, and we evaluated the proximity to the optimum. Although we chose conditions favorable for mutation rate optimization, the evolved rates were invariably far below the optimu…
Notas taxonómicas y distributivas sobre <em>Serapias lingua</em> subsp. <em>tunetana</em> (Orchidaceae), una rara espècie end…
2019
Serapias lingua subsp. tunetana, una rara orquídea endémica con área de distribución restringida en Túnez, al norte de Túnez, ha sido redescubierta lejos de su localidad tipo después de 22 años. Desde su primer hallazgo en 1996 y su descripción publicada en 2005, la subespecie no se había encontrado nuevamente y se presume que se extinguió o fue identificada erróneamente. En este trabajo se proporciona una descripción detallada de la subespecie que justifica una enmienda a su descripción, y se aporta asimismo un mapa de distribución y varias fotografías. Se listan las principales afinidades de la subsp. tunetana con los táxones más estrechamente relacionados dentro del grupo de S. lingua qu…
Spatiotemporal Structure of Host‐Pathogen Interactions in a Metapopulation
2009
International audience; The ecological and evolutionary dynamics of species are influenced by spatiotemporal variation in population size. Unfortunately, we are usually limited in our ability to investigate the numerical dynamics of natural populations across large spatial scales and over long periods of time. Here we combine mechanistic and statistical approaches to reconstruct continuous-time infection dynamics of an obligate fungal pathogen on the basis of discrete-time occurrence data. The pathogen, Podosphaera plantaginis, infects its host plant, Plantago lanceolata, in a metapopulation setting where the presence of the pathogen has been recorded annually for 6 years in similar to 4,00…
New Reptile Hosts for Helminth Parasites in a Mediterranean Region
2020
ABSTRACT Parasitic helminths are an almost universal feature of vertebrate animals, but reptiles are among the hosts with the most depauperate parasite communities. Biological traits of reptiles ar...
Data-Based Forest Management with Uncertainties and Multiple Objectives
2016
In this paper, we present an approach of employing multiobjective optimization to support decision making in forest management planning. The planning is based on data representing so-called stands, each consisting of homogeneous parts of the forest, and simulations of how the trees grow in the stands under different treatment options. Forest planning concerns future decisions to be made that include uncertainty. We employ as objective functions both the expected values of incomes and biodiversity as well as the value at risk for both of these objectives. In addition, we minimize the risk level for both the income value and the biodiversity value. There is a tradeoff between the expected val…
Poplar Biochar as an Alternative Substrate for Curly Endive Cultivated in a Soilless System
2020
Imminent necessity for eco-friendly and low-cost substitutes to peat is a defiance in the soilless plant cultivation systems. Wood biochar could entirely or partly substitute peat as a plant growing constituent to produce vegetables. Nevertheless, knowledge concerning potential plant performance of leafy green vegetables grown on wood biochar is restricted. The present study assessed the main physicochemical traits of various growing media constituted by decreasing the content of peat and by increasing the percentages of poplar wood biochar. Yield, nutritional and functional properties of curly endive plants cultivated in a protected environment were also tested. Biochar was pyrolyzed from …
Predator odor recognition and antipredatory response in fish: does the prey know the predator diel rhythm?
2007
We studied in a laboratory experiment using stream tanks if two percid prey fish, the perch (Perca fluviatilis) and the ruffe (Gymnocephalus cernuus), can recognize and respond to increased predation risk using odors of two piscivores, the pike (Esox lucius) and the burbot (Lota lota). Burbot is night-active most of the year but pike hunts predominantly visually whenever there is enough light. Perch is a common day-active prey of pike and dark-active ruffe that of burbot. We predicted that besides recognizing the predator odors, the prey species would respond more strongly to odors of the predator which share the same activity pattern. Both perch and ruffe clearly responded to both predator…
Integrated membrane bioreactors modelling: A review on new comprehensive modelling framework
2021
International audience; Integrated Membrane Bioreactor (MBR) models, combination of biological and physical models, have been representing powerful tools for the accomplishment of high environmental sustainability. This paper, produced by the International Water Association (IWA) Task Group on Membrane Modelling and Control, reviews the state-of-the-art, identifying gaps for future researches, and proposes a new integrated MBR modelling framework. In particular, the framework aims to guide researchers and managers in pursuing good performances of MBRs in terms of effluent quality, operating costs (such as membrane fouling, energy consumption due to aeration) and mitigation of greenhouse gas…