Search results for "conformation"
showing 10 items of 1414 documents
Recombinant expression, in vitro refolding, and biophysical characterization of the N-terminal domain of T1R3 taste receptor
2012
Facteur d'impact (5 ans) : 1,617Notoriété à 2 ans : Acceptable (biochem.res.methods); The sweet taste receptor is a heterodimeric receptor composed of the T1R2 and T1R3 subunits, while T1R1 and T1R3 assemble to form the umami taste receptor. T1R receptors belong to the family of class C G-protein coupled receptors (GPCRs). In addition to a transmembrane heptahelical domain, class C GPCRs have a large extracellular N-terminal domain (NTD), which is the primary ligand-binding site. The T1R2 and T1R1 subunits have been shown to be responsible for ligand binding, via their NTDs. However, little is known about the contribution of T1R3-NTD to receptor functions. To enable biophysical characteriza…
Kti12, a PSTK-like tRNA dependent ATPase essential for tRNA modification by Elongator
2019
Abstract Posttranscriptional RNA modifications occur in all domains of life. Modifications of anticodon bases are of particular importance for ribosomal decoding and proteome homeostasis. The Elongator complex modifies uridines in the wobble position and is highly conserved in eukaryotes. Despite recent insights into Elongator's architecture, the structure and function of its regulatory factor Kti12 have remained elusive. Here, we present the crystal structure of Kti12′s nucleotide hydrolase domain trapped in a transition state of ATP hydrolysis. The structure reveals striking similarities to an O-phosphoseryl-tRNA kinase involved in the selenocysteine pathway. Both proteins employ similar …
Plasmonic nanostructures through DNA-assisted lithography
2018
DALI combines DNA origami with conventional top-down fabrication for creating designer high-resolution plasmonic nanostructures.
Chromatin modifiers and recombination factors promote a telomere fold-back structure, that is lost during replicative senescence.
2020
Telomeres have the ability to adopt a lariat conformation and hence, engage in long and short distance intra-chromosome interactions. Budding yeast telomeres were proposed to fold back into subtelomeric regions, but a robust assay to quantitatively characterize this structure has been lacking. Therefore, it is not well understood how the interactions between telomeres and non-telomeric regions are established and regulated. We employ a telomere chromosome conformation capture (Telo-3C) approach to directly analyze telomere folding and its maintenance in S. cerevisiae. We identify the histone modifiers Sir2, Sin3 and Set2 as critical regulators for telomere folding, which suggests that a dis…
Converging and Diverging Synthetic Strategies to Tetradentate (N,N′)-Diaminomethyl,(P,P′)-Ferrocenyl Ligands: Influence of tert-Butyl Groups on Ferro…
2015
Hexasubstituted hybrid tetradentate (N,N′,P,P′)-ferrocenes bearing phosphino and aminomethyl groups, plus hindering tert-butyl moieties, were synthesized by using two different strategies: a “diverging” synthesis involving successive functionalization of preformed di-tert-butylated ferrocene and a “converging” assembly of the species from appropriately substituted cyclopentadienyl rings. While the new cyclopentadienyl salts formed are of interest, their assembly with iron dichloride used as a “converging” way to produce tetradentate ferrocene ligands presented several drawbacks. Conversely, the synthesis of new tert-butylated (aminomethyl)ferrocene derivatives was found convenient to furthe…
26,28-Diallyloxy-5,11,17,23-tetra-tert-butyl-25,27-bis(cyanomethoxy)calix[4]arene in the partial cone conformation
2006
The title compound, C54H66N2O4, crystallizes with two molecules in the asymmetric unit. Both adopt the typical partial cone conformation which was also found for 26,28-diallyloxy-5,17-di-tert-butyl-25,27-bis(cyanomethoxy)-11,23-dinitrocalix[4]arene [Danila, Bohmer & Bolte (2005). Org. Biomol. Chem. 3, 3508–3513]. The crystal structure of the title compound in the 1,2-alternate conformation has been determined recently [Danila, Bohmer & Bolte (2005). Org. Biomol. Chem. 3, 3508–3513].
New propylamine oligopyrrole carboxamides linked to a heterocyclic or anthraquinone system: synthesis, DNA binding, topoisomerase I inhibition and cy…
2003
Continuing our studies on combilexines, compounds consisting of a DNA intercalator linked to a minor groove ligand, new results are presented. The synthesis of a series of new propylamine oligopyrrole carboxamides closely related to netropsin and distamycin A, linked to a heterocyclic or anthraquinone system is reported. The cytotoxic activity in vitro, the DNA binding characteristics and the inhibition of the topoisomerase I of the compounds were studied in order to explain the biological mechanism of action of these new potential combilexines. Some of the synthesised compounds showed cytotoxic activity against human tumour cell lines, as well as DNA binding and topoisomerase I inhibiting …
Tris(1,10-phenanthroline)zinc(II) dichromate tetrahydrate
2002
The title compound, [Zn(C12H8N2)3][Cr2O7]·4H2O, was obtained by mixing 1,10-phenanthroline (phen), potassium chromate and zinc sulfate solutions. The asymmetric unit is composed of a [Zn(phen)3]2+ cation, a Cr2O72− anion and four water molecules. The ZnII ion is in a distorted octahedral environment, coordinated by six N atoms from three phen molecules. The cations are connected to anions by weak C—H⋯O hydrogen bonds, with shortest H⋯O distances of ca 2.27–2.33 A. The Cr2O72− anion is in a staggered conformation. Two of the four crystallographically independent water molecules are ordered, and two others are disordered, each over two sites.
Thermal Denaturation of Pea Globulins (Pisum sativum L.)—Molecular Interactions Leading to Heat-Induced Protein Aggregation
2013
The heat-induced denaturation and aggregation of mixed pea globulins (8%, w/w) were investigated using differential scanning calorimetry (DSC), SDS-PAGE, and size-exclusion chromatography (SEC-HPLC). DSC data showed that the pea proteins denaturation temperature (T(d)) was heating-rate dependent. The T(d) value decreased by about 4 °C by lowering the heating rate from 10 to 5 °C/min. The SDS-PAGE analysis revealed that protein denaturation upon heating at 90 °C was mainly governed by noncovalent interaction. The SEC-HPLC measurements indicated that low-denatured legumin (≈350-410 kDa) and vicilin/convicilin (≈170 kDa) globulins were heat-denatured and most of their subunits reassociated int…
High-nuclearity Ni-substituted polyoxometalates: a series of poly(polyoxotungstate)s containing 20–22 nickel centers.
2011
Three high-nuclearity Ni-substituted polyoxotungstates (POTs)--[Ni(enMe)2(H2O)2]2[Ni(H2O)6]2[Ni(enMe)2][Ni(H2O)2]1.5[HNi20X4W34(OH)4O136(H2O)6(enMe)8]·11 H2O (3), [Ni(en)2(H2O)]2[H8Ni21X4W34(OH)4O136(en)10(H2O)5]·22 H2O (4), and [Ni(enMe)2]2[H6Ni22X4W34(OH)4O136(H2O)6(enMe)10]·18 H2O (5), in which en = ethylenediamine, enMe = 1,2-diaminopropane, X = 0.5 P+0.5 Ge--were made under hydrothermal conditions and characterized by IR spectroscopy, elemental analysis, thermogravimetric analysis, powder X-ray diffraction, and single-crystal X-ray diffraction. The structures of 3–5 can be viewed as novel derivatives of [H6Ni20P4W34(OH)4O136(enMe)8(H2O)6]·12 H 2O (1) and [Ni(en)2(H2O)]2[H8Ni20P4W34(OH)…