Search results for "copers"

showing 10 items of 123 documents

High genetic stability of potato yellow mosaic Panama virus infecting tomato in Panama

2018

The relevant regions in Panama involved in commercial tomato production, including the Chiriqui, Veraguas, Herrera, Los Santos and Panama Oeste provinces, were surveyed for the distribution and genetic diversity of potato yellow mosaic Panama virus (PYMPV) in the growing seasons of 2011 and 2012. A total of 28 tomato plots were surveyed and 314 individual tomato plants were sampled. DNA was extracted from each plant for a subsequent rolling circle amplification (RCA) analysis, to confirm the presence of begomovirus infections. The samples displaying a positive RCA reaction were subsequently analysed by PCR with a specific primer pair to identify PYMPV. This virus was detected in samples col…

0301 basic medicineCloningGenetic diversityVeterinary medicinePanamaBegomovirusfood and beveragesBegomovirus . Rolling circle amplification . Single-strand conformation polymorphism . Phylogenetic analysis . Solanum lycopersicumSettore AGR/12 - Patologia VegetaleSingle-strand conformation polymorphismPlant ScienceBiologybiology.organism_classificationVirus03 medical and health sciences030104 developmental biologyRolling circle replicationPotato yellow mosaic Panama virus
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Fast detection of Southern tomato virus by one-step transcription loop-mediated isothermal amplification (RT-LAMP)

2017

Southern tomato virus (STV) is a double stranded RNA (dsRNA) virus belonging to genus Amalgavirus (family Amalgamaviridae) which has been detected in tomato plants showing stunting, fruit discoloration and size reduction. A one-step reverse-transcription loop-mediated isothermal amplification (RT-LAMP) assay was developed for the detection of STV in total RNA or sap extracts (obtained just by grinding in buffer) from STV-infected tomato plants by using a set of three primers pairs which were designed to the sequence of the STV putative coat protein. Amplification products were visualized by gel electrophoresis or direct staining of DNA. The sensitivity of RT-LAMP was identical to that of th…

0301 basic medicineLoop-mediated isothermal amplificationSensitivity and SpecificityVirusPlant Viruses03 medical and health sciencesSolanum lycopersicumTranscription (biology)VirologyPlant virusPolymeraseDNA PrimersPlant DiseasesGel electrophoresisbiologyfungiTemperaturefood and beveragesReverse TranscriptionNucleic acid amplification techniqueVirologyMolecular biologyRNA silencing030104 developmental biologybiology.proteinRNA ViralNucleic Acid Amplification TechniquesJournal of Virological Methods
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Tomato sauce enriched with olive oil exerts greater effects on cardiovascular disease risk factors than raw tomato and tomato sauce: a randomized tri…

2016

Epidemiological studies have observed a negative association between tomato intake and the incidence of cardiovascular disease. As tomato sauces are usually cooked with the addition of oil, some studies have pointed out that both processes may increase the bioavailability of the bioactive compounds. However, the effect of consumption of raw tomatoes and tomato sauces on inflammation biomarkers and adhesion molecules related to atherosclerosis remains unknown. The aim of this study was to test the postprandial effects of a single dose of raw tomatoes (RT), tomato sauce (TS) and tomato sauce with refined olive oil (TSOO) on cardiovascular disease risk factors. We performed an open, prospectiv…

0301 basic medicineMaleTime FactorsLymphocyteCD36postprandial030204 cardiovascular system & hematologytomatochemistry.chemical_compound0302 clinical medicineSolanum lycopersicumRisk FactorsTomàquetsFood scienceCookingProspective StudiesProspective cohort studyNutrition and DieteticsCross-Over Studiesbiologycardiovascularcookedfood and beveragesPostprandial PeriodLipidsInflamaciótomato; postprandial; cardiovascular; cooked; food matrix; bioavailabilityOli d'olivaPostprandialmedicine.anatomical_structureCardiovascular diseasesEstudi de casosCardiovascular DiseasesFemaleInflammation Mediatorslcsh:Nutrition. Foods and food supplyNutritive ValueAdultAdolescentlcsh:TX341-641Article03 medical and health sciencesYoung AdultTomatoesmedicineHumansSugarOlive OilInflammation030109 nutrition & dieteticsCholesterolbusiness.industryMalalties cardiovascularsProtective FactorsCrossover studyBioavailabilityDietchemistrySpainFruitbiology.proteinCase studiesbusinessEnergy IntakebioavailabilityCell Adhesion MoleculesBiomarkersfood matrixOlive oilFood Science
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Transcriptome analysis revealed that a quorum sensing system regulates the transfer of the pAt megaplasmid in Agrobacterium tumefaciens.

2016

Background Agrobacterium tumefaciens strain P4 is atypical, as the strain is not pathogenic and produces a for this species unusual quorum sensing signal, identified as N-(3-hydroxy-octanoyl)-homoserine lactone (3OH,C8-HSL). Results By sequence analysis and cloning, a functional luxI-like gene, named cinI, has been identified on the At plasmid of A. tumefaciens strain P4. Insertion mutagenesis in the cinI gene and transcriptome analyses permitted the identification of 32 cinI-regulated genes in this strain, most of them encoding proteins responsible for the conjugative transfer of pAtP4. Among these genes were the avhB genes that encode a type 4 secretion system (T4SS) involved in the forma…

0301 basic medicineacylhomoserime lactoneIdentification[SDV]Life Sciences [q-bio]AgrobacteriumPlasmidePlant Rootsfluids and secretionsPlasmidSolanum lycopersicumhttp://aims.fao.org/aos/agrovoc/c_16014Expression des gènesDynamique des populationsCloning MolecularPhylogenyGeneticsbiology000 - Autres thèmeshttp://aims.fao.org/aos/agrovoc/c_27583food and beveragesAgrobacterium tumefaciensLactonehttp://aims.fao.org/aos/agrovoc/c_768[SDV] Life Sciences [q-bio]Quorum sensingT4SSConjugation GeneticPropriété biologiquehttp://aims.fao.org/aos/agrovoc/c_35128PlasmidsResearch Articlehttp://aims.fao.org/aos/agrovoc/c_4145BiotechnologyDtr systemSéquence nucléotidiqueAgrobacteriumSequence analysisMutagenesis (molecular biology technique)At plasmid03 medical and health scienceshttp://aims.fao.org/aos/agrovoc/c_4891Bacterial Proteinsstomatognathic systemhttp://aims.fao.org/aos/agrovoc/c_3081Geneticshttp://aims.fao.org/aos/agrovoc/c_1501Acylhomoserine lactoneTranscriptomicsGenehttp://aims.fao.org/aos/agrovoc/c_6111H20 - Maladies des plantesCloning[ SDV ] Life Sciences [q-bio]Bactériologiehttp://aims.fao.org/aos/agrovoc/c_27444Sequence Analysis RNATranscription géniqueConjugationGene Expression ProfilingBiologie moléculaireGene Expression Regulation Bacterialbiochemical phenomena metabolism and nutritionQuorum sensing;Agrobacterïum;At plasmid;transcriptomics;conjugation;T4SS;Dtr system;Acylhomoserine lactonebiology.organism_classificationhttp://aims.fao.org/aos/agrovoc/c_27527Quorum sensinghttp://aims.fao.org/aos/agrovoc/c_3791030104 developmental biologyAgrobacterium tumefaciensbacteriaGenetic Fitness
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Degradation of aromatic compounds through the β-ketoadipate pathway is required for pathogenicity of the tomato wilt pathogenFusarium oxysporumf. sp.…

2012

Plant roots react to pathogen attack by the activation of general and systemic resistance, including the lignification of cell walls and increased release of phenolic compounds in root exudate. Some fungi have the capacity to degrade lignin using ligninolytic extracellular peroxidases and laccases. Aromatic lignin breakdown products are further catabolized via the β-ketoadipate pathway. In this study, we investigated the role of 3-carboxy-cis,cis-muconate lactonizing enzyme (CMLE), an enzyme of the β-ketoadipate pathway, in the pathogenicity of Fusarium oxysporum f. sp. lycopersici towards its host, tomato. As expected, the cmle deletion mutant cannot catabolize phenolic compounds known to …

2. Zero hungerExudateLaccase0303 health sciencesbiology030306 microbiologyMutantfood and beveragesSoil SciencePlant ScienceFungi imperfectibiology.organism_classificationMicrobiologyCell wall03 medical and health scienceschemistry.chemical_compoundFusarium oxysporum f.sp. lycopersicichemistryFusarium oxysporummedicineLigninmedicine.symptomAgronomy and Crop ScienceMolecular Biology030304 developmental biologyMolecular Plant Pathology
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The tomato sauce making process affects the bioaccessibility and bioavailability of tomato phenolics: A pharmacokinetic study

2013

Tomato sauce is the most commonly consumed processed tomato product worldwide, but very little is known about how the manufacturing process may affect the phenolic composition and bioavailability after consumption. In a prospective randomised, cross-over intervention study, we analysed the plasma and urinary levels of tomato phenolic compounds and their metabolites after acute consumption of raw tomatoes and tomato sauce, enriched or not with refined olive oil during production. Respectively, eleven and four phenolic metabolites were found in urine and plasma samples. The plasma concentration and urinary excretion of naringenin glucuronide were both significantly higher after the consumptio…

AdultMaleNaringeninFood HandlingBiological AvailabilityUrineAnalytical Chemistrychemistry.chemical_compoundSolanum lycopersicumPhenolsPharmacokineticsHumansProspective StudiesPhenolsFood scienceChromatographyfungifood and beveragesGeneral MedicineMiddle AgedBioavailabilitychemistryFemaleComposition (visual arts)GlucuronideFood ScienceOlive oilFood Chemistry
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RNA2-encoded VP37 protein of Broad bean wilt virus 1 is a determinant of pathogenicity, host susceptibility, and a suppressor of post-transcriptional…

2020

Abstract Broad bean wilt virus 1 (BBWV‐1, genus Fabavirus, family Secoviridae) is a bipartite, single‐stranded positive‐sense RNA virus infecting many horticultural and ornamental crops worldwide. RNA1 encodes proteins involved in viral replication whereas RNA2 encodes two coat proteins (the large and small coat proteins) and two putative movement proteins (MPs) of different sizes with overlapping C‐terminal regions. In this work, we determined the role played by the small putative BBWV‐1 MP (VP37) on virus pathogenicity, host specificity, and suppression of post‐transcriptional gene silencing (PTGS). We engineered a BBWV‐1 35S‐driven full‐length cDNA infectious clone corresponding to BBWV‐…

AgroinfiltrationInfectious cloneDeterminant of pathogenicityvirusesdeterminant of pathogenicityGene ExpressionSoil ScienceNicotiana benthamianaPlant ScienceBBWV-1 determinant of pathogenicity Fabavirus infectious clone Secoviridae VSRBBWV‐1Host SpecificityBBWV-1VirusViral ProteinsBroad bean wilt virusSolanum lycopersicumTobaccoH20 Plant diseasesMolecular BiologyPlant DiseasesVirulencebiologySecoviridaeTurnip crinkle virusfungiinfectious cloneVSRfood and beveragesSettore AGR/12 - Patologia VegetaleRNA virusOriginal ArticlesDeteminant of Pathogenicitybiology.organism_classificationPotato virus XVirologyFabavirusVicia fabaRNA silencingSettore AGR/11 - Entomologia Generale E ApplicataRNA ViralOriginal ArticleRNA InterferenceCapsicumAgronomy and Crop Science
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Mycotoxin Profile and Phylogeny of Pathogenic Alternaria Species Isolated from Symptomatic Tomato Plants in Lebanon

2021

The tomato is one of the most consumed agri-food products in Lebanon. Several fungal pathogens, including Alternaria species, can infect tomato plants during the whole growing cycle. Alternaria infections cause severe production and economic losses in field and during storage. In addition, Alternaria species represent a serious toxicological risk since they are able to produce a wide range of mycotoxins, associated with different toxic activities on human and animal health. Several Alternaria species were detected on tomatoes, among which the most important are A. solani, A. alternata, and A. arborescens. A set of 49 Alternaria strains isolated from leaves and stems of diseased tomato plant…

Alternaria arborescens0106 biological sciencesVeterinary medicineHealth Toxicology and MutagenesisAlternariolAlternaria mali morpho-speciesmultilocus gene sequencingToxicology<i>Alternaria mali</i> morpho-species01 natural sciencesAlternaria alternataArticletoxigenic fungi03 medical and health scienceschemistry.chemical_compoundSolanum lycopersicumPhylogeneticsotorhinolaryngologic diseasesTenuazonic acidGenetic variabilityLebanonMycotoxinPhylogenyPlant Diseases030304 developmental biology0303 health sciencesbiologyStrain (biology)RAlternariafood and beveragesMycotoxins<i>Alternaria alternata</i>biology.organism_classificationAlternariachemistryFruit<i>Alternaria arborescens</i>Alternaria alternataMedicine010606 plant biology & botanyToxins
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A tolerant behavior in salt-sensitive tomato plants can be mimicked by chemical stimuli

2007

Lycopersicon esculentum plants exhibit increased salt stress tolerance following treat‑ ment with adipic acid monoethylester and 1,3‑diaminepropane (DAAME), known as an inducer of resistance against biotic stress in tomato and pepper. For an efficient water and nutrient uptake, plants should adapt their water potential to compensate a decrease in water soil potential produced by salt stress. DAAME‑treated plants showed a faster and stronger water potential reduction and an enhanced proline accumulation. Salinity‑induced oxidative stress was also ameliorated by DAAME treatments. Oxidative membrane damage and ethylene emission were both reduced in DAAME‑treated plants. This effect is probably…

Antioxidantbiologymedicine.medical_treatmentfungifood and beveragesPlant ScienceBiotic stressbiology.organism_classificationPhotosynthesismedicine.disease_causeLycopersiconHorticultureBotanyPeppermedicineProlineOxidative stressTranspirationResearch Paper
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Overexpression of a cell wall enzyme reduces xyloglucan depolymerization and softening of transgenic tomato fruits.

2010

Xyloglucan xyloglucosyltransferase/endohydrolase (XTHs: EC 2.4.1.207 and/or EC 3.2.1.151) has been proposed to have a dual role integrating newly secreted xyloglucan chains into an existing wall-bound xyloglucan and restructuring existing cell wall material by catalyzing transglucosylation between previously wall bound xyloglucan molecules. In this work we generated transgenic tomatoes with altered levels of an XTH gene. These transgenic fruits showed significant overexpression of the XTH proteins in comparison with the wild type. Specific XET activity was approximately 4.33 fold higher in the transgenic fruits compared with the wild type fruits, although in both cases the activity decrease…

Base SequenceDepolymerizationTransgeneWild typefood and beveragesRipeningGeneral ChemistryPlants Genetically ModifiedPolymerase Chain ReactionCell wallXyloglucanchemistry.chemical_compoundchemistryBiochemistrySolanum lycopersicumCell WallPolysaccharidesGenetically modified tomatoRNA MessengerGeneral Agricultural and Biological SciencesSofteningDNA PrimersJournal of agricultural and food chemistry
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