Search results for "dissimilarity"
showing 10 items of 16 documents
Comparing pollen spectra from modified Tauber traps and moss samples: examples from a selection of woodlands across Europe
2010
This paper compares pollen spectra derived from modified Tauber traps and moss samples from a selection of woodland types from Bulgaria, the Czech Republic, Georgia, Greece, Poland, Switzerland and Wales. The study examines the representation of individual taxa in the two sampling media and aims to ascertain the duration of pollen deposition captured by a moss. The latter aim was pursued through the calculation of dissimilarity indexes to assess how many years of pollen deposited in a pollen trap yield percentage values that are most similar to those obtained from the moss. The results are broadly scattered; the majority of moss samples being most similar to several years of pollen depositi…
Global functional variation in alpine vegetation
2021
International audience; Questions. What are the functional trade-offs of vascular plant species in global alpine ecosystems? How is functional variation related to vegetation zones, climatic groups and biogeographic realms? What is the relative contribution of macroclimate and evolutionary history in shaping the functional variation of alpine plant communities? Location. Global. Methods. We compiled a data set of alpine vegetation with 5,532 geo-referenced plots, 1,933 species and six plant functional traits. We used principal component analysis to quantify functional trade-offs among species and trait probability density to assess the functional dissimilarity of alpine vegetation in differ…
Do plant-based biogeographical regions shape aphyllophoroid fungal communities in Europe?
2018
Aim: Aphyllophoroid fungi are associated with plants, either using plants as a resource (as parasites or decomposers) or as symbionts (as mycorrhizal partners). In spite of their strong association with plants, it is unknown how much plant distributions determine their biogeographical patterns compared with environmental factors such as climate and human land use. In this study, our aims are to (1) describe the spatial diversity patterns of aphyllophoroid fungi in Europe and (2) identify the factors shaping these patterns. Location: Europe, as well as the adjacent Subarctic to Arctic islands (Greenland, Faroe Islands, Iceland, Svalbard), Palestine and the south-east coast of the Caspian Sea…
Dissimilarity Application for Medical Imaging Classification
2005
In the traditional way of learning from examples of objects the classifiers are built in a feature space. However, alternative ways can be found by constructing decision rules on dissimilarity (distance) representations. In such a recognition process a new object is described by its distances to (a subset of) die training samples. The use of the dissimilarities is especially of interest when features are difficult to obtain or when they have a little discriminative power. Purpose of this work is the development of an automatic classification system which could be useful for radiologists in the investigation of breast cancer. The software has been designed in the framework of the MAGIC-5 col…
One-Sided Prototype Selection on Class Imbalanced Dissimilarity Matrices
2012
In the dissimilarity representation paradigm, several prototype selection methods have been used to cope with the topic of how to select a small representation set for generating a low-dimensional dissimilarity space. In addition, these methods have also been used to reduce the size of the dissimilarity matrix. However, these approaches assume a relatively balanced class distribution, which is grossly violated in many real-life problems. Often, the ratios of prior probabilities between classes are extremely skewed. In this paper, we study the use of renowned prototype selection methods adapted to the case of learning from an imbalanced dissimilarity matrix. More specifically, we propose the…
Compression-based classification of biological sequences and structures via the Universal Similarity Metric: experimental assessment.
2007
Abstract Background Similarity of sequences is a key mathematical notion for Classification and Phylogenetic studies in Biology. It is currently primarily handled using alignments. However, the alignment methods seem inadequate for post-genomic studies since they do not scale well with data set size and they seem to be confined only to genomic and proteomic sequences. Therefore, alignment-free similarity measures are actively pursued. Among those, USM (Universal Similarity Metric) has gained prominence. It is based on the deep theory of Kolmogorov Complexity and universality is its most novel striking feature. Since it can only be approximated via data compression, USM is a methodology rath…
Dissimilarity Application in Digitized Mammographic Images Classification.
2006
Purpose of this work is the development of an automatic classification system which could be useful for radiologists in the investigation of breast cancer. The software has been designed in the framework of the MAGIC-5 collaboration. In the traditional way of learning from examples of objects the classifiers are built in a feature space. However, an alternative ways can be found by constructing decision rules on dissimilarity (distance) representations. In such a recognition process a new object is described by its distances to (a subset of) the training samples. The use of the dissimilarities is especially of interest when features are difficult to obtain or when they have a little discrim…
A New Dissimilarity Measure for Clustering Seismic Signals
2011
Hypocenter and focal mechanism of an earthquake can be determined by the analysis of signals, named waveforms, related to the wave field produced and recorded by a seismic network. Assuming that waveform similarity implies the similarity of focal parameters, the analysis of those signals characterized by very similar shapes can be used to give important details about the physical phenomena which have generated an earthquake. Recent works have shown the effectiveness of cross-correlation and/or cross-spectral dissimilarities to identify clusters of seismic events. In this work we propose a new dissimilarity measure between seismic signals whose reliability has been tested on real seismic dat…
Deepen Into the Social Segregation of Secondary Schools in the Community of Madrid
2021
Recientes estudios han mostrado que la segregación escolar por nivel socioeconómico en la Comunidad de Madrid es muy alta, la más alta de España, y una de las más elevadas de Europa. Esta investigación profundiza en el conocimiento de la segregación escolar por nivel socioeconómico en educación secundaria con datos recientes mediante la consecución de tres objetivos: a) estimando su magnitud con diversas estrategias, calculando su perfil para 19 grupos minoritarios y comparándola con otras Comunidades; b) estudiando el papel de los centros públicos, privados concertados y no concertados; y c) determinando la aportación del programa de bilingüismo a la segregación. Se realiza una explotación…
Convergence and divergence in organization of phytoplankton communities under various regimes of physical and biological control
2010
The hypothesis that physical constraints may be as important, if not more important, than biological ones in shaping the structure of phytoplankton assemblage was tested by analyzing longterm (11–29 years) phytoplankton series in eight lakes and nine sites located along a latitudinal gradient in the Northern hemisphere. Phytoplankton biomass was used and similarity of assemblages in same months of the annual data sets was then calculated by subtracting the Bray–Curtis dissimilarity index from 1. The extent of biological and physical forcing was partly based on ‘‘expert evaluation’’: the importance of four physical (light availability, temperature, conductivity, and sediment stirring up) and…