Search results for "dynamics."

Linear ViscoElastic (LVE) Behaviour of Pure Bitumen via Fractional Model

2012

AbstractBy fitting experimental data from static creep/recovery carried out on pure bitumen, it is shown that the fractional model proposed enables the description of both creep and recovery behaviour with fewer parameters than those needed by other models in the literature. In particular, the model is fitted to experimental data of complex modulus |G*| and phase angle δ° obtained from Dynamic Mechanical Analysis. Lastly, it is demonstrated that when the fractional model is used, complex modulus isotherms for a range of frequencies can be created simply starting from isochronals at f = 1Hz.

Density functional/molecular dynamics simulations of phase-change materials

2013

Code for manuscript: Nonreciprocal Josephson linear response

2023

Codes related to manuscript "Nonreciprocal Josephson linear response", including the scripts that generate the figures in the manuscript. The preprint is available at https://doi.org/10.48550/arXiv.2306.12295 This is a snapshot of the code dataset that has been taken on 06.07.2023. A more detailed description of the data and the address to the GitLab repository for the latest version of the code can be found from the parent dataset of this data publication.

Nonreciprocal Josephson linear response (parent repository)

2023

The repository contains computer codes related to manuscript "Nonreciprocal Josephson linear response", including the scripts that generate the figures in the manuscript. The preprint is available at https://doi.org/10.48550/arXiv.2306.12295 This is the metadata for the parent repository of the codes. Updates and possible corrections are documented in the GitLab project, where the material saved and shared. The GitLab project can be found and downloaded from the following address: https://gitlab.jyu.fi/jyucmt/2023-nonreciprocal-josephson

Information Transfer in Linear Multivariate Processes Assessed through Penalized Regression Techniques: Validation and Application to Physiological N…

2020

The framework of information dynamics allows the dissection of the information processed in a network of multiple interacting dynamical systems into meaningful elements of computation that quantify the information generated in a target system, stored in it, transferred to it from one or more source systems, and modified in a synergistic or redundant way. The concepts of information transfer and modification have been recently formulated in the context of linear parametric modeling of vector stochastic processes, linking them to the notion of Granger causality and providing efficient tools for their computation based on the state&ndash

Methionine in a protein hydrophobic core drives tight interactions required for assembly of spider silk

2019

Web spiders connect silk proteins, so-called spidroins, into fibers of extraordinary toughness. The spidroin N-terminal domain (NTD) plays a pivotal role in this process: it polymerizes spidroins through a complex mechanism of dimerization. Here we analyze sequences of spidroin NTDs and find an unusually high content of the amino acid methionine. We simultaneously mutate all methionines present in the hydrophobic core of a spidroin NTD from a nursery web spider’s dragline silk to leucine. The mutated NTD is strongly stabilized and folds at the theoretical speed limit. The structure of the mutant is preserved, yet its ability to dimerize is substantially impaired. We find that side chains of…

Computational methods and theory for ion channel research

2022

Ion channels are fundamental biological devices that act as gates in order to ensure selective ion transport across cellular membranes; their operation constitutes the molecular mechanism through which basic biological functions, such as nerve signal transmission and muscle contraction, are carried out. Here, we review recent results in the field of computational research on ion channels, covering theoretical advances, state-of-the-art simulation approaches, and frontline modeling techniques. We also report on few selected applications of continuum and atomistic methods to characterize the mechanisms of permeation, selectivity, and gating in biological and model channels.

Towards an efficient meshfree solver

2016

In this paper we focus on the enhancement in accuracy approximating a function and its derivatives via smoothed particle hydrodynamics. We discuss about improvements in the solution by reformulating the original method by means of the Taylor series expansion and by projecting with the kernel function and its derivatives. The accuracy of a function and its derivatives, up to a fixed order, can be simultaneously improved by assuming them as unknowns of a linear system. The improved formulation has been assessed with gridded and scattered data points distribution and the convergence has been analyzed referring to a case study in a 2D domain.

Current Accounts and Coordination of Wage Bargaining

2018

This study provides novel evidence on the impact of labor market institutions on current account dynamics. Our results suggest that a high degree of coordination of wage bargaining has a positive effect on the current account balance over the long run. This result is not driven entirely by wage moderation induced by centralized wage setting. We also provide robust evidence that a high degree of coordination of wage bargaining is associated with a slower current account adjustment toward its long-run equilibrium. This result seems theoretically plausible; the aggregate shocks in the exporting sector are largely driven by idiosyncratic shocks and the presence of idiosyncratic shocks increases…

Essays on current account imbalances

2017

Global current account imbalances and intra-euro area imbalances have been at the forefront of academic and policy debates for the last ten years. This thesis examines the determinants of current account balances and external adjustment. It consists of an introduction and four empirical studies. This thesis highlights the importance of institutional factors such as differences in national cultures and cross-country differences in the coordination of wage bargaining on external balances. The first study investigates the effects of deep determinants on current account balances. The point estimates are economically and statistically significant, suggesting that countries populated by Roman Cat…