Search results for "efficient"
showing 10 items of 1603 documents
Two-Stage Bayesian Approach for GWAS With Known Genealogy
2019
Genome-wide association studies (GWAS) aim to assess relationships between single nucleotide polymorphisms (SNPs) and diseases. They are one of the most popular problems in genetics, and have some peculiarities given the large number of SNPs compared to the number of subjects in the study. Individuals might not be independent, especially in animal breeding studies or genetic diseases in isolated populations with highly inbred individuals. We propose a family-based GWAS model in a two-stage approach comprising a dimension reduction and a subsequent model selection. The first stage, in which the genetic relatedness between the subjects is taken into account, selects the promising SNPs. The se…
Iron-loaded transferrin (Tf) is detrimental whereas iron-free Tf confers protection against brain ischemia by modifying blood Tf saturation and subse…
2018
Despite transferrin being the main circulating carrier of iron in body fluids, and iron overload conditions being known to worsen stroke outcome through reactive oxygen species (ROS)-induced damage, the contribution of blood transferrin saturation (TSAT) to stroke brain damage is unknown. The objective of this study was to obtain evidence on whether TSAT determines the impact of experimental ischemic stroke on brain damage and whether iron-free transferrin (apotransferrin, ATf)-induced reduction of TSAT is neuroprotective. We found that experimental ischemic stroke promoted an early extravasation of circulating iron-loaded transferrin (holotransferrin, HTf) to the ischemic brain parenchyma.…
Transfer Free Energies of Test Proteins Into Crowded Protein Solutions Have Simple Dependence on Crowder Concentration
2019
The effects of macromolecular crowding on the thermodynamic properties of test proteins are determined by the latter's transfer free energies from a dilute solution to a crowded solution. The transfer free energies in turn are determined by effective protein-crowder interactions. When these interactions are modeled at the all-atom level, the transfer free energies may defy simple predictions. Here we investigated the dependence of the transfer free energy (Δμ) on crowder concentration. We represented both the test protein and the crowder proteins atomistically, and used a general interaction potential consisting of hard-core repulsion, non-polar attraction, and solvent-screened electrostati…
Odorant Metabolism Analysis by an Automated Ex Vivo Headspace Gas-Chromatography Method
2015
International audience; In the olfactory epithelium (OE), odorant metabolizing enzymes have the dual function of volatile component detoxification and active clearance of odorants from the perireceptor environment to respectively maintain the integrity of the tissues and the sensitivity of the detection. Although emphasized by recent studies, this enzymatic mechanism is poorly documented in mammals. Thus, olfactory metabolism has been characterized mainly in vitro and for a limited number of odorants. The automated ex vivo headspace gas-chromatography method that was developed here was validated to account for odorant olfactory metabolism. This method easily permits the measurement of the f…
Interactions between volatiles and lipids in complex systems
1998
Partition equilibria of three aroma compounds in three different biphasic systems were studied by a liquid/liquid partition technique to investigate interactions that occur between volatiles and lipids in biphasic solutions. The lipids used were linoleic acid and ricinoleic acid and tetradecane as a model. The three aroma compounds were ethyl acetate, 2,5-dimethylpyrazine, and oct-1-en-3-ol. The results showed that the intermolecular forces involved were weak. Infrared spectroscopy was then performed on binary systems (tetradecane and linoleic acid or aroma compound) and on ternary systems (tetradecane, linoleic acid, and aroma compound) to determine the nature of the interactions. This met…
Intermolecular oxidative dehydrogenative 3,3′-coupling of benzo[b]furans and benzo[b]thiophenes promoted by DDQ/H+: total synthesis of shandougenine B
2016
With an excess of a strong acid, 2,3-dichloro-5,6-dicyano-1,4-quinone (DDQ) is shown to promote metal-free intermolecular oxidative dehydrogenative (ODH) 3,3'-coupling of 2-aryl-benzo[b]furans and 2-aryl-benzo[b]thiophenes up to 92% yield as demonstrated with 9 substrates. Based on the analysis of oxidation potentials and molecular orbitals combined with EPR, NMR and UV-Vis observations, the studied reaction is initiated by a DDQ-substrate charge transfer complex and presumably proceeds via oxidation of the substrate into an electrophilic radical cation that further reacts with another molecule of a neutral substrate. The coupling reactivity can easily be predicted from the oxidation potent…
Isomeric state of $^{80}$Y and its role in the astrophysical rp-process
2001
5 pages, 7 figures.-- PACS nrs: 21.10.Tg; 23.20.Nx; 27.50.+e.
An alternative conception of PM10 concentration changes after short-term precipitation in urban environment
2018
Abstract In the article, a linear model is presented which describes a reduction of PM10 mass concentration in relation to the type of precipitation and water vapour content in the air. The model was built using covariance analysis. In studies of PM10 concentration changes, the results of 247 observations were used, which were carried out in the urban area. Concentration changes were archived during short-term (30 min) convection and large-scale rainfalls. For the determination of PM10 mass concentration, the reference method was used. To describe changes in PM10 concentration in the air after precipitation, a series of linear models were created, in which the explanatory variables were: th…
Acoustic characterization of Silica aerogel clamped plates for perfect absorption purpose
2017
International audience; Silica aerogel has been widely studied as bulk material for its extremely low density and thermal conductivity. Plates or membranes made of this extremely soft materials exhibits interesting properties for sound absorption. A novel signal processing method for the characterization of an acoustic metamaterial made of silica aerogel clamped plates is presented. The acoustic impedance of a silica aerogel clamped plate is derived from the elastic theory for the flexural waves, while the transfer matrix method is used to model reflection and transmission coefficients of a single plate. Experimental results are obtained by using an acoustic impedance tube. The difference b…
Experimental investigation of holes interaction effect on the sound absorption coefficient of micro-perforated panels under high and medium sound lev…
2011
Abstract This paper experimentally investigates the holes interaction effect on the sound absorption coefficient of micro-perforated panels under high and medium sound levels. The theoretical formulations are based on a semi-empirical approach and the use of Fok’s function to model the acoustic surface impedance. For the high sound level regime, an empirical power law involving three coefficients is adapted. It is shown theoretically and experimentally that these coefficients can lead to optimized absorption performance and particularly, a formula relating the critical Reynolds number (Reynolds number value after which the absorption coefficient decreases with the increase of sound level) a…