Search results for "evolutionary"
showing 10 items of 4392 documents
Evolution in the Arctic: a phylogeographic analysis of the circumarctic plant,Saxifraga oppositifolia(Purple saxifrage)
2003
Summary • A survey of chloroplast DNA variation in the circumarctic-alpine plant, Saxifraga oppositifolia, has resolved two highly divergent cpDNA lineages with geographically widespread and mainly allopatric distributions that are largely concordant with those of two subspecies, that is, subspp. oppositifolia and glandulisepala. These subspecies differ for a single morphological trait and hence level of morphological divergence does not equate to molecular divergence within the species. • The two cpDNA lineages were estimated to have diverged from their most recent common ancestor 5.37–3.76 Ma, that is, during the early to mid-Pliocene. • A nested clade analysis was conducted in an attempt…
Phylogeographic patterns of host-race evolution in Tephritis conura (Diptera: Tephritidae)
2006
Host-race evolution is a prime candidate for sympatric speciation because host shifts must take place in the presence of both hosts. However, the geographic context in which the shift takes place may have strong allopatric or peripatric components if the primary host within a localized area is scarce or even goes extinct. Inference of the relative importance of the geographic mode of speciation may be gained from phylogeographic imprints. Here, we investigate the phylogeography of host races of the tephritid fly Tephritis conura from sympatric, parapatric and allopatric populations of Cirsium heterophyllum and Cirsium oleraceum (Asteraceae) in Europe, for addressing the age and direction, a…
Rapid radiation of North American desert genera of the Papaveraceae: Evidence from restriction site mapping of PCR-amplified chloroplast DNA fragments
1995
Phylogenetic relationships of a group of North American desert genera of the Papaveraceae subfam. Papaveroideae and Platystemonoideae were investigated with an RFLP analysis of three PCR-amplified chloroplast genome regions. In agreement with earlier results it was found that subfam. Platystemonoideae is nested within subfam. Papaveroideae. The group under study is characterized by a large number of generic autapomorphies but only few informative synapomorphies. This is interpreted as strong evidence for a rapid radiation event caused by major climatic changes in the past. Poor phylogenetic resolution seems to reflect biological reality and not to be an experimental artifact. There is also …
Are homalozoans echinoderms? An answer from the extraxial-axial theory
2000
Homalozoans include four classes of non-pentamerous Paleozoic echinoderms: Homostelea (cinctans), Ctenocystoidea (ctenoid-bearing homalozoans), Homoiostelea (solutes), and Stylophora (cornutes and mitrates). Their atypical morphologies have historically made it difficult to relate them to other classes. Therefore, their systematic positions have been represented by two hypotheses (H): as stem taxa to echinoderms (H1) or as stem taxa to chordates (H2). These conclusions rest on previous inability to recognize synapomorphies with more crownward echinoderms, resulting in a forcing of the homalozoans down the phylogenetic tree that is more artifactual than evolutionary. The Extraxial-Axial Theo…
18S rDNA phylogeny and evolution of cap development in Polyphysaceae (formerly Acetabulariaceae; Dasycladales, Chlorophyta)
2003
Abstract Cells of the members of the Dasycladales have a unique body plan well known from fossils. They persist today in 38 recognized species. This study investigates in detail the development of reproductive structures in 17 Polyphysaceae (= Acetabulariaceae) species and provides a molecular phylogenetic analysis of 18S ribosomal DNA sequence data of 23 species of the order Dasycladales, including 17 of the 19 extant members of the family Polyphysaceae. Reproductive cap development is documented by scanning electron microscopy in 17 species, by histological sections in five species, and by growth measurements. Other morphometric data are also provided for most species. Bayesian analysis o…
One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads.
2020
Mapping of high-throughput sequencing (HTS) reads to a single arbitrary reference genome is a frequently used approach in microbial genomics. However, the choice of a reference may represent a source of errors that may affect subsequent analyses such as the detection of single nucleotide polymorphisms (SNPs) and phylogenetic inference. In this work, we evaluated the effect of reference choice on short-read sequence data from five clinically and epidemiologically relevant bacteria (Klebsiella pneumoniae, Legionella pneumophila, Neisseria gonorrhoeae, Pseudomonas aeruginosa and Serratia marcescens). Publicly available whole-genome assemblies encompassing the genomic diversity of these species…
The evolutionary trend of platform denticulation in Middle Triassic acuminate Gondolellidae (Conodonta)
2017
Kılıç, Ali Murat (Balikesir Author)
Molecular markers and species delimitation: examples from the European batrachofauna
1996
AbstractMolecular techniques have revolutionised zoological systematics since the beginning of the seventies. Within the last twenty years numerous new amphibian species have been described in Europe almost solely on the basis of molecular data. This paper focuses on the use of molecular character state and genetic distance data for the delimitation of species. Case studies of European anurans (Discoglossus, water frogs of the genus Rana) are discussed in the framework of concurring species concepts to illustrate problems of assigning species status to divergent populations on the basis of molecular data.
Evolution, ecology and systematics of Soldanella (Primulaceae) in the southern Apennines (Italy)
2015
Background The populations of Soldanella (Primulaceae) of the southern Apennines (Italy) are unique within the genus for their distribution and ecology. Their highly fragmented distribution range, with three main metapopulations on some of the highest mountains (Gelbison, Sila and Aspromonte massifs) of the area, poses intriguing questions about their evolutionary history and biogeography, and about the possibility of local endemisms. Aims and methods In order to clarify the phylogeny and biogeography of the three metapopulations of Soldanella in the southern Apennines, attributed to S. calabrella to date, and to identify possible local endemisms, a comparative approach based on the study o…