Search results for "evolutionary"

Rewoluzionaro arodbeedribu pirmais startautiskais kongress, 3.-19.jūlijā 1921. g. [Revolucionāro arodbiedrību pirmais starptautiskais kongress ...]

1922

Computer-Aided Diagnosis System with Backpropagation Artificial Neural Network—Improving Human Readers Performance

2016

This article presents the results of a study into possibility of artificial neural networks (ANNs) to classify cancer changes in mammographic images. Today’s Computer-Aided Detection (CAD) systems cannot detect 100 % of pathological changes. One of the properties of an ANN is generalized information —it can identify not only learned data but also data that is similar to training set. The combination of CAD and ANN could give better result and help radiologists to take the right decision.

Multilayer neural networks: an experimental evaluation of on-line training methods

2004

Artificial neural networks (ANN) are inspired by the structure of biological neural networks and their ability to integrate knowledge and learning. In ANN training, the objective is to minimize the error over the training set. The most popular method for training these networks is back propagation, a gradient descent technique. Other non-linear optimization methods such as conjugate directions set or conjugate gradient have also been used for this purpose. Recently, metaheuristics such as simulated annealing, genetic algorithms or tabu search have been also adapted to this context.There are situations in which the necessary training data are being generated in real time and, an extensive tr…

1993

The genetic material containts the instructions necessary for the construction of an organism and ensures the continuity of the species by transmission of the construction plan from generation to generation over considerable periods of time.

Structural and evolutionary analysis of the copia-like elements in the Arabidopsis thaliana genome.

2001

The analysis of 460 kb of genomic sequence of Arabidopsis thaliana chromosome III allowed us to identify two new transposable elements named AtC1 and AtC2. AtC1 shows identical long terminal repeats (LTRs) and all the structural features characteristic of the copia-like active elements. AtC2 is also a full copia-like element, but a putative stop codon in the open reading frame (ORF) would produce a truncated protein. In order to identify the copia-like fraction of the A. thaliana genome, a careful computer-based analysis of the available sequences (which correspond to 92% of the genome) was performed. Approximately 300 nonredundant copia-like sequences homologous to AtC1 and AtC2 were detec…

Spread of the autonomous transposable element hobo in the genome of Drosophila melanogaster.

1995

The transposable element hobo has been introduced into the previously empty Drosophila melanogaster strain Hikone so that its dynamics can be followed and it can be compared with the P element. Five transformed lines were followed over 58 generations. The results were highly dependent on the culture temperature, the spread of hobo element being more efficient at 25 degrees C. The multiplication of hobo sequences resulted in a change in the features of these lines in the hobo system of hybrid dysgenesis. The number of hobo elements remained low (two to seven copies) and the insertions always corresponded to complete sequences. Our findings suggest that, despite their genetic similarities, P …

The evolutionary genetics of the hobo transposable element in the Drosophila melanogaster complex.

1994

Hobo elements are a family of transposable elements found in Drosophila melanogaster and its three sibling species: D. simulans, D. mauritiana and D. sechellia. Studies in D. melanogaster have shown that hobo may be mobilized, and that the genetic effects of such mobilizations included the general features of hybrid dysgenesis: mutations, chromosomal rearrangements and gonadal dysgenis in F1 individuals. At the evolutionary level some hobo-hybridizing sequences have also been found in the other members of the melanogaster subgroup and in many members of the related montium subgroup. Surveys of older collected strains of D. melanogaster suggest that complete hobo elements were absent prior t…

Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi

2022

International audience; Summary The ectomycorrhizal (ECM) symbiosis has independently evolved from diverse types of saprotrophic ancestors. In this study, we seek to identify genomic signatures of the transition to the ECM habit within the hyper-diverse Russulaceae. We present comparative analyses of the genomic architecture and the total and secreted gene repertoires of 18 species across the order Russulales of which 13 are newly sequenced, including a representative of a saprotrophic member of Russulaceae, Gloeopeniophorella convolvens. The genomes of ECM Russulaceae are characterized by a loss of genes for plant cell-wall degrading enzymes (PCWDEs), an expansion of genome size through in…

Disentangling Sources of Gene Tree Discordance in Phylogenomic Datasets: Testing Ancient Hybridizations in Amaranthaceae s.l.

2019

Gene tree discordance in large genomic datasets can be caused by evolutionary processes such as incomplete lineage sorting and hybridization, as well as model violation, and errors in data processing, orthology inference, and gene tree estimation. Species tree methods that identify and accommodate all sources of conflict are not available, but a combination of multiple approaches can help tease apart alternative sources of conflict. Here, using a phylotranscriptomic analysis in combination with reference genomes, we test a hypothesis of ancient hybridization within the plant family Amaranthaceae s.l. that was previously supported by morphological, ecological, and Sanger-based molecular data…

New insights into the OCST problem

2009

This paper considers the Euclidean variant of the optimal communciation spanning tree (OCST) problem. Researches have analyzed the structure of the problem and found that high quality solutions prefer edges of low cost. Further, edges pointing to the center of the network are more likely to be included in good solutions. We add to the literature and provide additional insights into the structure of the OCST problem. Therefore, we investigate properies of the whole tree, such as node degrees and the Wiener index. The results reveal that optimal solutions are structured in a star-like manner. There are few nodes with high node degrees, these nodes are located next to the graph's center. The m…