Search results for "evolutionary"
showing 10 items of 4392 documents
The Social Life of Viruses
2021
Despite their simplicity, viruses exhibit certain types of social interactions. Situations in which a given virus achieves higher fitness in combination with other members of the viral population have been described at the level of transmission, replication, suppression of host immune responses, and host killing, enabling the evolution of viral cooperation. Although cellular coinfection with multiple viral particles is the typical playground for these interactions, cooperation between viruses infecting different cells is also established through cellular and viral-encoded communication systems. In general, the stability of cooperation is compromised by cheater genotypes, as best exemplified…
Defining the Island Dwarfing Rate of an Extinct Sicilian Elephant Using Ancient DNA
2020
Evolution on islands, and the often extreme phenotypic changes associated with it, has attracted much interest from evolutionary biologists. However, measuring the rate of change of a particular phenotypic trait of extinct animals can be challenging, due to the incompleteness of the fossil record. Here, we use combined molecular and fossil evidence to define the minimum and maximum rate of dwarfing in an extinct Mediterranean dwarf elephant from Puntali Cave (Sicily). Despite the challenges associated with recovering ancient DNA from warm climates, we successfully retrieved a mitogenome from a sample with an estimated age between 147,000 and 50,000 years. Our results suggest that this speci…
A new species of Armeria (Plumbaginaceae) from southern Spain with molecular and morphometric evidence on its origin
2001
The definitive version is available at http://onlinelibrary.wiley.com/
New Lower Devonian Polygnathids (Conodonta) from the Spanish Central Pyrenees, with comments on the early radiation of the group
2014
The comprehensive study of six Pragian-lower Emsian (Lower Devonian) sections from the Spanish Central Pyrenees has yielded a rich assemblage of conodont faunas, highlighting an important succession of Polygnathus species. Among them, the presence of the biostratigraphical markers P. pireneae , P. kitabicus, P. excavatus excavatus and P. exc. 114 stands out. This conodont succession allows the identification of the Pragian/Emsian boundary and the early Emsian zones and subzones: the kitabicus Zone and the Lower and Middle excavatus subzones. It is also remarkable the presence of three new polygnathid species: P. aragonensis n. sp., P. carlsi n. sp. and P. ramoni n. sp. Additionally, P. pan…
Evolution and systematics of the late miocene spanish Giraffidae (Mammalia, Ruminantia, Pecora)
2017
Esta tesis doctoral se centra en la filogenia y sistemática de los jiráfidos del Mioceno tardío español (Mammalia, Ruminantia, Pecora). Los jiráfidos son un grupo monofilético de rumiantes caracterizados por la presencia de caninos bilobulados y un tipo especial de apéndice craneal epifisario y permanente denominado osicono [1]. Asimismo son los únicos supervivientes del clado Giraffomorpha, un grupo de rumiantes pécoras que contiene a Propalaeoryx junto con los Palaeomerycidae, Prolybitheriidae, Climacoceratidae y Giraffidae [2,3].Actualmente la familia Giraffidae está representada por tan solo dos géneros actuales africanos, Okapia, con una única especie, Okapia johnstoni, que habita las …
Probabilistic maturation reaction norms assessed from mark-recaptures of wild fish in their natural habitat
2014
Published version of an article in the journal: Ecology and Evolution. Also available from the publisher at: http://dx.doi.org/10.1002/ece3.1044 Open Access Reaction norms are a valuable tool in evolutionary biology. Lately, the probabilistic maturation reaction norm approach, describing probabilities of maturing at combinations of age and body size, has been much applied for testing whether phenotypic changes in exploited populations of fish are mainly plastic or involving an evolutionary component. However, due to typical field data limitations, with imperfect knowledge about individual life histories, this demographic method still needs to be assessed. Using 13 years of direct mark-recap…
A Novel Approach to Identify Candidate Prognostic Factors for Hepatitis C Treatment Response Integrating Clinical and Viral Genetic Data
2015
The combined therapy of pegylated interferon (IFN) plus ribavirin (RBV) has been for a long time the standard treatment for patients infected with hepatitis C virus (HCV). In the case of genotype 1, only 38%–48% of patients have a positive response to the combined treatment. In previous studies, viral genetic information has been occasionally included as a predictor. Here, we consider viral genetic variation in addition to 11 clinical and 19 viral populations and evolutionary parameters to identify candidate baseline prognostic factors that could be involved in the treatment outcome. We obtained potential prognostic models for HCV subtypes la and lb in combination as well as separately. We …
Statistical upscaling of ecosystem CO2 fluxes across the terrestrial tundra and boreal domain: Regional patterns and uncertainties
2021
The regional variability in tundra and boreal carbon dioxide (CO2) fluxes can be high, complicating efforts to quantify sink-source patterns across the entire region. Statistical models are increasingly used to predict (i.e., upscale) CO2 fluxes across large spatial domains, but the reliability of different modeling techniques, each with different specifications and assumptions, has not been assessed in detail. Here, we compile eddy covariance and chamber measurements of annual and growing season CO2 fluxes of gross primary productivity (GPP), ecosystem respiration (ER), and net ecosystem exchange (NEE) during 1990–2015 from 148 terrestrial high-latitude (i.e., tundra and boreal) sites to a…
Preceding Host History of Conjugative Resistance Plasmids Affects Intra- and Interspecific Transfer Potential from Biofilm
2023
Conjugative plasmids can confer antimicrobial resistance (AMR) to their host bacterium. The plasmids disperse even between distantly related host species, rescuing the host from otherwise detrimental effects of antibiotics. Little is known about the role of these plasmids in the spread of AMR during antibiotic treatment. One unstudied question is whether the past evolutionary history of a plasmid in a particular species creates host specificity in its rescue potential or if interspecific coevolution can improve interspecific rescues. To study this, we coevolved the plasmid RP4 under three different host settings; solely Escherichia coli or Klebsiella pneumoniae, or alternating between both …
Revision of Recent and fossil Mixtacandona Klie 1938 (Ostracoda, Candonidae) from Italy, with description of a new species
2017
Although studies on ostracods dwelling in inland subterranean habitats of Italy have increased in the last decades, highlighting a considerable taxonomic diversity, available information is still far from sufficient to understand phylogenetic and biogeographic relationships. Mixtacandona Klie 1938 is one of the most common and diverse genera of ostracods in subterranean waters. Of the 20 living recognized species in the genus, all stygobiontic and restricted to the Palearctic Region, four are known for the Italian peninsula and Sardinia, one of which exclusively as fossil. Several other Recent and fossil taxa attributable to Mixtacandona, but identified at supraspecific level, have been rep…