Search results for "evolutionary"
showing 10 items of 4392 documents
Selection for Robustness in Mutagenized RNA Viruses
2007
Mutational robustness is defined as the constancy of a phenotype in the face of deleterious mutations. Whether robustness can be directly favored by natural selection remains controversial. Theory and in silico experiments predict that, at high mutation rates, slow-replicating genotypes can potentially outcompete faster counterparts if they benefit from a higher robustness. Here, we experimentally validate this hypothesis, dubbed the ‘‘survival of the flattest,’’ using two populations of the vesicular stomatitis RNA virus. Characterization of fitness distributions and genetic variability indicated that one population showed a higher replication rate, whereas the other was more robust to mut…
De novo genome assembly of the land snail Candidula unifasciata (Mollusca: Gastropoda)
2021
Abstract Among all molluscs, land snails are a scientifically and economically interesting group comprising edible species, alien species and agricultural pests. Yet, despite their high diversity, the number of genome drafts publicly available is still scarce. Here, we present the draft genome assembly of the land snail Candidula unifasciata, a widely distributed species along central Europe, belonging to the Geomitridae family, a highly diversified taxon in the Western-Palearctic region. We performed whole genome sequencing, assembly and annotation of an adult specimen based on PacBio and Oxford Nanopore long read sequences as well as Illumina data. A genome draft of about 1.29 Gb was gene…
Spatial distribution of saplings in heavily worn urban forests: Implications for regeneration and management
2012
Abstract We studied the spatial distribution of saplings in the vicinity of other saplings and mature trees in heavily worn urban forests. Our aim was to identify favorable microsites for saplings to regenerate under different levels of wear. We hypothesized that these safe microsites were situated close to tree trunks that might offer shelter from trampling caused by humans and their pet dogs. The distribution of saplings was explored at 0.1–0.6 m to the nearest sapling and 0.1–2 m to the nearest mature tree. Sorbus aucuparia was the most abundant sapling species, followed by Populus tremula , Betula pubescens and Picea abies . These species all tended to cluster with their conspecific sap…
Fish introductions and light modulate food web fluxes in tropical streams: a whole-ecosystem experimental approach.
2016
Decades of ecological study have demonstrated the importance of top-down and bottom-up controls on food webs, yet few studies within this context have quantified the magnitude of energy and material fluxes at the whole-ecosystem scale. We examined top-down and bottom-up effects on food web fluxes using a field experiment that manipulated the presence of a consumer, the Trinidadian guppy Poecilia reticulata, and the production of basal resources by thinning the riparian forest canopy to increase incident light. To gauge the effects of these reach-scale manipulations on food web fluxes, we used a nitrogen (15 N) stable isotope tracer to compare basal resource treatments (thinned canopy vs. co…
Response of the N and P cycles of an old-growth montane forest in Ecuador to experimental low-level N and P amendments
2010
Abstract Atmospheric nitrogen (N) and phosphorus (P) depositions are expected to increase in the tropics as a consequence of increasing human activities in the next decades. In the literature, it is frequently assumed that tropical montane forests are N-limited, while tropical lowland forests are P-limited. In a low-level N and P addition experiment, we determined the short-term response of N and P cycles in a north Andean montane forest on Palaeozoic shists and metasandstones at an elevation of 2100 m a.s.l. to increased N and P inputs. We evaluated experimental N, P and N + P additions (50 kg ha −1 yr −1 of N, 10 kg ha −1 yr −1 of P and 50 kg + 10 kg ha −1 yr −1 of N and P, respectivel…
Effects of stand-level and landscape factors on understorey plant community traits in broad-leaved forest of the boreo-nemoral zone in Latvia
2019
Abstract Knowledge of the limiting processes shaping the composition of plant communities of woodland is important in conservation of biological diversity. The aim of our study was to examine the effect of stand-level factors (soil and canopy composition, age and area) and landscape factors (fragmentation of broad-leaved forest, distance to a historical manor house, and past history) on plant community trait composition in broad-leaved forest. We hypothesized that the plant functional community is shaped by both dispersal filtering due to landscape factors and by environmental characteristics. We recorded all vascular plants, described canopy composition and estimated soil characteristics i…
Evaluating structural and compositional canopy characteristics to predict the light-demand signature of the forest understorey in mixed, semi-natural…
2020
Questions: Light availability at the forest floor affects many forest ecosystem processes, and is often quantified indirectly through easy-to-measure stand characteristics. We investigated how three such characteristics, basal area, canopy cover and canopy closure, were related to each other in structurally complex mixed forests. We also asked how well they can predict the light-demand signature of the forest understorey (estimated as the mean Ellenberg indicator value for light [“EIVLIGHT”] and the proportion of “forest specialists” [“%FS”] within the plots). Furthermore, we asked whether accounting for the shade-casting ability of individual canopy species could improve predictions of EIV…
An assessment of the floristic composition, structure and possible origin of a liana forest in the Guayana Shield
2015
Liana is a life form that possess high importance in many neotropical forests. Density of climbers apparently increases with the intervention rate (eg. logging). The aim of this work is to characterize the structure, floristic composition and soils of a sector classified as Liana Forest (LF). We identified a LF sector in a not-logged area; three 1 ha square plots were measured (individuals ≥ 10 cm dbh, “diameter at breast height”). In each plot we evaluate four 100 m2 square understory sub-plots (all spermatophyta individuals < 10 cm dbh). LF has a low canopy (< 15 m) and is dominated by Alexa imperatricis and Pentaclethra macroloba. Basal area (20.4 m2ha-1) and diversity (H´= 2.6) ar…
Airborne-laser-scanning-derived auxiliary information discriminating between broadleaf and conifer trees improves the accuracy of models for predicti…
2020
Managing forests for ecosystem services and biodiversity requires accurate and spatially explicit forest inventory data. A major objective of forest management inventories is to estimate the standing timber volume for certain forest areas. In order to improve the efficiency of an inventory, field based sample-plots can be statistically combined with remote sensing data. Such models usually incorporate auxiliary variables derived from canopy height models. The inclusion of forest type variables, which quantify broadleaf and conifer volume proportions, has been shown to further improve model performance. Currently, the most common way of quantifying broadleaf and conifer forest types is by ca…
Brown bear behaviour in human-modified landscapes: The case of the endangered Cantabrian population, NW Spain
2018
Large carnivores are recolonizing parts of their historical range in Europe, a heavily modified human landscape. This calls for an improvement of our knowledge on how large carnivores manage to coexist with humans, and on the effects that human activity has on large carnivore behaviour, especially in areas where carnivore populations are still endangered. Brown bears Ursus arctos have been shown to be sensitive to the presence of people and their activities. Thus, bear conservation and management should take into account potential behavioural alterations related to living in human-modified landscapes. We studied the behaviour of brown bears in the Cantabrian Mountains, NW Spain, where an en…