Search results for "fermentation"

showing 10 items of 746 documents

Lactobacillus aquaticus sp. nov., isolated from a Korean freshwater pond.

2009

A Lactobacillus strain, IMCC1736T, was isolated recently from a Korean freshwater pond following an extensive study of the microbial community in this ecosystem. Its 16S rRNA gene was sequenced and phylogenetic analysis placed this strain within the Lactobacillus salivarius group, closely related to Lactobacillus satsumensis NRIC 0604T, with 97.9% sequence similarity. In the present work, the taxonomic status of strain IMCC1736T has been re-evaluated. It was characterized phylogenetically, genotypically and phenotypically and, based on DNA-DNA hybridization values, this strain represents a novel Lactobacillus species. Strain IMCC1736T can be differentiated genotypically from its closest rel…

DNA BacterialGenotypeSequence analysisMolecular Sequence DataFresh WaterBiologySodium ChlorideMicrobiologyDNA RibosomalMicrobiologyRibotypingPhylogeneticsLactobacillusRNA Ribosomal 16SCluster AnalysisEcology Evolution Behavior and SystematicsPhylogenyKoreaLactobacillus salivariusfood and beveragesNucleic Acid HybridizationGeneral MedicineSequence Analysis DNARibosomal RNAHydrogen-Ion Concentration16S ribosomal RNAbiology.organism_classificationBacterial Typing TechniquesRandom Amplified Polymorphic DNA TechniqueLactobacillusFermentationCarbohydrate MetabolismBacteriaLocomotionInternational journal of systematic and evolutionary microbiology
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Polyphasic study of wine Lactobacillus strains: taxonomic implications

2005

One hundred and seventy-eight lactobacilli isolated from wine were characterized by a polyphasic approach. Strains were phenotypically identified at genus and species level by classical tests including the analysis of cell morphology, homo/heterofermentative character, sugar fermentation patterns, growth at different temperatures and the optical nature of the isomer of lactic acid produced from glucose. Molecular techniques such as random amplification of polymorphic DNA (RAPD), amplified 16S rDNA restriction analysis (16S-ARDRA), PFGE-RFLP and ribotyping were used to characterize strains, and their potential for identification and/or typing was evaluated. The information obtained with thes…

DNA BacterialLactobacillus paracaseiMolecular Sequence Dataved/biology.organism_classification_rank.speciesWineLactobacillus hilgardiiLactobacillus pentosusCell morphologyDNA RibosomalRibotypingMicrobiologyRibotypingRNA Ribosomal 16SLactobacillusVitisEcology Evolution Behavior and SystematicsGeneticsbiologyved/biologyLactobacillus brevisfood and beveragesSequence Analysis DNAGeneral Medicinebiology.organism_classificationBacterial Typing TechniquesElectrophoresis Gel Pulsed-FieldRandom Amplified Polymorphic DNA TechniqueLactobacillusPhenotypeFermentationLactobacillus collinoidesPolymorphism Restriction Fragment LengthLactobacillus plantarumInternational Journal of Systematic and Evolutionary Microbiology
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Spirochaeta coccoides sp. nov., a novel coccoid spirochete from the hindgut of the termite Neotermes castaneus.

2006

ABSTRACT A novel spirochete strain, SPN1, was isolated from the hindgut contents of the termite Neotermes castaneus . The highest similarities (about 90%) of the strain SPN1 16S rRNA gene sequence are with spirochetes belonging to the genus Spirochaeta , and thus, the isolate could not be assigned to the so-called termite clusters of the treponemes or to a known species of the genus Spirochaeta . Therefore, it represents a novel species, which was named Spirochaeta coccoides . In contrast to all other known validly described spirochete species, strain SPN1 shows a coccoid morphology and is immotile. The isolated strain is obligately anaerobic and ferments different mono-, di-, and oligosacc…

DNA BacterialMolecular Sequence DataIsopteraBiologyApplied Microbiology and BiotechnologyDNA RibosomalMicrobiologyRNA Ribosomal 16SInvertebrate MicrobiologyYeast extractAnimalsAnaerobiosisRibosomal DNAPhylogenyBase CompositionEcologySpirochaetaHindgutSpirochaetaSequence Analysis DNA16S ribosomal RNAbiology.organism_classificationBacterial Typing TechniquesFermentationEnergy sourceDigestive SystemBacteriaFood ScienceBiotechnologyApplied and environmental microbiology
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Molecular analysis of the dominant lactic acid bacteria of chickpea liquid starters and doughs and propagation of chickpea sourdoughs with selected W…

2020

Abstract Fermented chickpea liquid is used as a leavening agent in chickpea bread production. In the present study, traditional chickpea liquid starter and dough samples were collected from bakeries in Turkey and microbiologically investigated. Culture-independent analysis for microbiota diversity, performed by MiSeq Illumina, identified Clostridium perfringens as major group in all samples, while Weissella spp. Dominated LAB community. A culture-dependent methodology was applied and 141 isolates were confirmed to be members of the LAB group based on 16s rRNA gene sequence analysis. In particular, 11 different LAB species were identified confirming the high frequency of isolation of weissel…

DNA BacterialRAPD-PCRWeissellaMicrobiology03 medical and health sciencesStarterLactobacillalesRNA Ribosomal 16SCerealFood scienceVolatile organic compoundsWeissella cibaria030304 developmental biologyLeavening agent0303 health sciencesbiology030306 microbiologyLactobacillus brevisfood and beveragesPediococcus acidilacticiBreadSequence Analysis DNAbiology.organism_classificationCicerLegumeSettore AGR/15 - SCIENZE E TECNOLOGIE ALIMENTARILeuconostoc mesenteroidesWeissellaFermentationFood MicrobiologyFermented FoodsMySeq illuminaLactobacillus plantarumFood ScienceSettore AGR/16 - Microbiologia Agraria
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Yeast Population Dynamics during the Fermentation and Biological Aging of Sherry Wines

2001

ABSTRACTMolecular and physiological analyses were used to study the evolution of the yeast population, from alcoholic fermentation to biological aging in the process of “fino” sherry wine making. The four races of “flor”Saccharomyces cerevisiae (beticus, cheresiensis, montuliensis, androuxii) exhibited identical restriction patterns for the region spanning the internal transcribed spacers 1 and 2 (ITS-1 and ITS-2) and the 5.8S rRNA gene, but this pattern was different, from those exhibited by non-florS. cerevisiaestrains. This flor-specific pattern was detected only after wines were fortified, never during alcoholic fermentation, and all the strains isolated from the velum exhibited the typ…

DNA BacterialRestriction MappingPopulationFlorWineSaccharomyces cerevisiaeEthanol fermentationBiologyDNA MitochondrialApplied Microbiology and BiotechnologyIndustrial MicrobiologyDNA Ribosomal SpacerBotanyFood scienceeducationEcosystemWineeducation.field_of_studyEcologyAging of winefood and beveragesPhysiology and BiotechnologyYeastRNA Ribosomal 5.8SYeast in winemakingKaryotypingFermentationFermentationPolymorphism Restriction Fragment LengthFood ScienceBiotechnologyApplied and Environmental Microbiology
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16S-ARDRA, a tool for identification of lactic acid bacteria isolated from grape must and wine.

2003

Lactic acid bacteria (LAB) are found in a great variety of habitats, including grape must and wines. There is a close relationship between the species of LAB which develop during fermentation and the eventual quality of the wine. For these reasons analytical techniques allowing fast and reliable identification of wine LAB are needed. In this work a simple and accurate protocol for identifying species of LAB isolated from grape must and wine is presented. This protocol is based on the amplification, directly from colony, of 16S rDNA and later digestion with one of the following restriction enzymes BfaI, MseI and AluI. A sequential use of the three enzymes is proposed to simplify LAB wine ide…

DNA BacterialWineGram-Positive BacteriaApplied Microbiology and BiotechnologyMicrobiologyDNA RibosomalPolymerase Chain ReactionLactobacillusLeuconostocFood microbiologyLactic AcidPediococcusEcology Evolution Behavior and SystematicsPhylogenyOenococcus oeniHexosesWinebiologyLactobacillus brevisbusiness.industrybiology.organism_classificationDNA FingerprintingBiotechnologyLactobacillusFermentationFood MicrobiologyPediococcusbusinessOenococcusLeuconostocSystematic and applied microbiology
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Identification of Critical Genes for Growth in Olive Brine by Transposon Mutagenesis of Lactobacillus pentosus C11

2013

ABSTRACT Olive brine represents a stressful environment due to the high NaCl concentration, presence of phenolic compounds known as antimicrobials, and low availability of nutrients. Thus, only a few strains of lactic acid bacteria (LAB) are adapted to grow in and ferment table olives. To identify the mechanisms by which these few strains are able to grow in olive brine, Lactobacillus pentosus C11, a particularly resistant strain isolated from naturally fermented table olives, was mutagenized by random transposition using the P junc -TpaseIS 1223 system (H. Licandro-Seraut, S. Brinster, M. van de Guchte, H. Scornec, E. Maguin, P. Sansonetti, J. F. Cavin, and P. Serror, Appl. Environ. Microb…

DNA Bacterial[SDV.SA]Life Sciences [q-bio]/Agricultural sciencesPROTEIN EXPRESSIONMutantGREEN OLIVESGenetics and Molecular BiologyLactobacillus pentosusSodium ChlorideBINDING PROTEINmedicine.disease_causeApplied Microbiology and BiotechnologyMicrobiology03 medical and health scienceschemistry.chemical_compoundBriningOleaLACTIC-ACBACTERIAmedicineSTRESS-RESPONSE[ SDV.SA ] Life Sciences [q-bio]/Agricultural sciencesEscherichia coliGene Library030304 developmental biology2. Zero hunger0303 health sciencesEcologybiologyReverse Transcriptase Polymerase Chain ReactionSTARTER CULTURE030306 microbiologyPHENOLIC-COMPOUNDSbiology.organism_classificationLactic acidLactobacilluschemistryMutagenesisTABLE OLIVESESCHERICHIA-COLIFermentationDNA Transposable ElementsFood MicrobiologySaltsFermentationTransposon mutagenesisPLANTARUM LPCO10Multiplex Polymerase Chain ReactionBacteriaFood ScienceBiotechnologyApplied and Environmental Microbiology
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Selection of Debaryomyces hansenii isolates as starters in meat products based on phenotypic virulence factors, tolerance to abiotic stress condition…

2021

Debaryomyces hansenii is a yeast widely used in meat fermentations as starter for the purpose of improving the aromatic quality of the final product. However, it has not been the subject of an extensive study regarding phenotypic characteristics important for starter selection, such as the capacity to grow at abiotic stress conditions occurring during fermentation, the ability to generate desirable aromas and the absence of virulence traits in yeasts.

Debaryomyces hanseniiDebaryomycesVirulence Factorsfood and beveragesSaccharomyces cerevisiaeGeneral MedicineStressApplied Microbiology and BiotechnologyvirulenceMeat ProductsaromaStress PhysiologicalFermentationOdorantsFood MicrobiologystarterBiotechnologyJournal of Applied Microbiology
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Changes in the proton potential and the cellular energetics of Escherichia coli during growth by aerobic and anaerobic respiration or by fermentation.

1998

The energetic parameters of Escherichia coli were analyzed for the aerobic/anaerobic transition. The electrochemical proton potential (delta p) across the cytoplasmic membrane was determined in the steady state of respiration with O2, nitrate, fumarate, dimethylsulfoxide (Me2SO), and for fermentation. With O2, a proton potential of -160 mV was obtained. For anaerobic respiration with nitrate, fumarate or Me2SO, delta p decreased only slightly by about 20 mV in contrast to earlier assumptions, whereas delta p dropped by approximately 40 mV during fermentation. Under all conditions, the membrane potential (delta psi) contributed the major portion to delta p. The cellular ATP levels were highe…

DeltaCellular waste productAnaerobic respirationBiologymedicine.disease_causeObligate aerobeBiochemistryAerobiosisMembrane PotentialsAdenosine DiphosphateAdenosine TriphosphateBiochemistryRespirationFermentationmedicineBiophysicsEscherichia coliFermentationAnaerobiosisPhosphorylationProtonsEnergy MetabolismAnaerobic exerciseEscherichia coliEdetic AcidEuropean journal of biochemistry
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Moiety and linker site heterologies for highly sensitive immunoanalysis of cyprodinil in fermented alcoholic drinks

2015

Cyprodinil is a new-generation anilinopyrimidine fungicide widely used in crop protection and frequently found in fruits. In this study, novel derivatives of cyprodinil with linker site heterologies were synthesized and employed in order to produce antibodies with enhanced affinity. Moreover, moiety-heterologous haptens were designed and prepared for assay sensitivity improvement. Two competitive enzyme-linked immunosorbent assays for the analysis of this active substance were developed using direct and indirect formats, achieving IC50 values around 0.15 μg/L. Analytical figures of merit and usability of the optimized assays were evaluated with wine and cider as model food processed matrice…

Detection limitWineHapten designChromatographyChemistryFood analysisFungicideWineAssay sensitivityHighly sensitiveCidersMoietyFermentationELISAHaptenLinkerFood ScienceBiotechnology
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