Search results for "force"
showing 10 items of 3423 documents
Long-Range Order Induced by Intrinsic Repulsion on an Insulating Substrate
2015
An ordered arrangement of molecular stripes with equidistant appearance is formed upon the adsorption of 3-hydroxybenzoic acid onto calcite (10.4) held at room temperature. In a detailed analysis of the next-neighbor stripe distances measured in noncontact atomic force microscopy images at various molecular coverages, we compare the observed stripe arrangement with a random arrangement of noninteracting stripes. The experimentally obtained distance distribution deviates substantially from what is expected for a random distribution of noninteracting stripes, providing direct evidence for the existence of a repulsive interaction between the stripes. At low molecular coverage, where the averag…
High-Pressure, High-Temperature Phase Diagram of Calcium Fluoride from Classical Atomistic Simulations
2013
We study the phase diagram of calcium fluoride (CaF2) under pressure using classical molecular dynamics simulations performed with a reliable pairwise interatomic potential of the Born−Mayer−Huggins form. Our results obtained under conditions 0 ≤ P ≲ 20 GPa and 0 ≤ T ≲ 4000 K reveal a rich variety of multiphase boundaries involving different crystal, superionic, and liquid phases, for all of which we provide an accurate parametrization. Interestingly, we predict the existence of three special triple points (i.e., solid−solid−superionic, solid−superionic−superionic, and superionic−superionic−liquid coexisting states) within a narrow and experimentally accessible thermodynamic range of 6 ≤ P …
Reorientational dynamics in simple supercooled liquids
1998
Abstract The geometry of the reorientational dynamics in the van der Waals liquid, toluene, and the hydrogen bond network, glycerol, are compared. Both systems have contributions from small angle fluctuations. In glycerol the fraction of these small angle fluctuations is much larger than in toluene, due to the stronger anisotropic interactions in the former substance. The average reorientational angle in both systems is similar and on the order of 10 ∘ . In addition we analyze the stretching of the rotational correlation functions of rank one and two. In both cases we find that the second rank correlation function has a more pronounced stretching than the corresponding first rank correlatio…
A DFT Study of Inter- and Intramolecular Aryne Ene Reactions
2015
The molecular mechanisms of inter- and intramolecular aryne-ene reactions have been theoretically studied by DFT methods at the MPWB1K/6-311G(d,p) level. These reactions proceed through a one-step mechanism via nearly asynchronous transition states (TSs), in which the C–C single bond formation is slightly more advanced than the hydrogen transfer process. These ene reactions show very low activation enthalpies (<1 kcal/mol) and are strongly exothermic by more than 73 kcal/mol. An electron localisation function (ELF) topological analysis of the changes of electron density during these ene reactions indicates that the bonding changes are nonconcerted. ELF topological analysis of the electron d…
Quantitative characterization of group electrophilicity and nucleophilicity for intramolecular Diels–Alder reactions
2010
In a previous work (L. R. Domingo, M. J. Aurell, P. Perez and R. Contreras, Tetrahedron 2002, 58, 4417) we proposed that the difference in global electrophilicity index be taken as a measure of the polarity at the transition state in intermolecular Diels-Alder reactions. We herein extend this model to deal with intramolecular Diels-Alder (IMDA) processes. The transferability of the empirical reactivity rules established for the intermolecular DA reactions to the IMDA reactions is discussed. The analysis based on group electrophilicity and nucleophilicity in general fails because having two different reactivity patterns within the same molecule hampers a clean classification of electrophilic…
From CO2 to dimethyl carbonate with dialkyldimethoxystannanes: the key role of monomeric species.
2011
International audience; The formation of dimethyl carbonate (DMC) from CO(2) and methanol with the dimer [n-Bu(2)Sn(OCH(3))(2)](2) was investigated by experimental kinetics in support of DFT calculations. Under the reaction conditions (357-423 K, 10-20 MPa), identical initial rates are observed with three different reacting mixtures, CO(2)/toluene, supercritical CO(2), and CO(2)/methanol, and are consistent with the formation of monomeric di-n-butyltin(iv) species. An intramolecular mechanism is, therefore, proposed with an Arrhenius activation energy amounting to 104 ± 10 kJ mol(-1) for DMC synthesis. DFT calculations on the [(CH(3))(2)Sn(OCH(3))(2)](2)/CO(2) system show that the exothermi…
Toward an Automatic Determination of Enzymatic Reaction Mechanisms and Their Activation Free Energies.
2013
We present a combination of the string method and a path collective variable for the exploration of the free energy surface associated to a chemical reaction in condensed environments. The on-the-fly string method is employed to find the minimum free energy paths on a multidimensional free energy surface defined in terms of interatomic distances, which is a convenient selection to study bond forming/breaking processes. Once the paths have been determined, a reaction coordinate is defined as a measure of the advance of the system along these paths. This reaction coordinate can be then used to trace the reaction Potential of Mean Force from which the activation free energy can be obtained. Th…
Experimental and DFT Studies on Competitive Heterocyclic Rearrangements. Part 2:1 A One-Atom Side-Chain versus the Classic Three-Atom Side-Chain (Bou…
2007
The experimental investigation of the base-catalyzed rearrangements of 3-acylamino-1,2,4-oxadiazoles evidenced a new reaction pathway which competes with the well-known ring-degenerate Boulton-Katritzky rearrangement (BKR). The new reaction consists of a one-atom side-chain rearrangement that is base-activated, occurs at a higher temperature than the BKR, and irreversibly leads to the corresponding 2-acylamino-1,3,4-oxadiazoles. An extensive DFT study is reported to elucidate the proposed reaction mechanism and to compare the three possible inherent routes: (i) the reversible three-atom side-chain ring-degenerate BKR, (ii) the ring contraction-ring expansion route (RCRE), and (iii) the one-…
The Reaction Mechanism of Spirocylization and Stereoselectivity Studies for the Calyculin C16 -C25 Fragment
2005
The mechanism of the double intramolecular hetero-Michael addition, a key reaction in the planned synthesis of the natural product calyculin C, has been studied by NMR. The cyclization follows Baldwin’s rules and proceeds first through a six-membered ring closure (6-endo-dig), followed by a five-membered ring cyclization (5-exo-trig). (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2005)
Kinetik der Bromierung von Phenolen und phenolischen Mehrkernverbindungen, 5. Mitt.
1984
The kinetics of the bromination of six differently substituted 2,6-bis(hydroxybenzyl)phenols having only one reactivepara position at the phenolic unit in the middle of the molecule were studied in acetic acid at 22°C. The reaction rate decreases if intramolecular hydrogen bonds between one or two hydroxy groups of the adjacent phenolic units and the hydroxy group of the reacting unit become possible, and it is especially low, if these hydrogen bonds are directed to the middle by bulky substituents inortho position. This must be explained by a smaller +M-effect of the hydroxy group of the reacting unit. A kinetic isotope effect is observed in deutero acetic acid, where the reaction rate is …