Search results for "genes"

showing 10 items of 13944 documents

First Assessment of Plasticizers in Marine Coastal Litter-Feeder Fauna in the Mediterranean Sea

2021

Micro and nanoplastics are harmful to marine life due to their high level of fragmentation and resistance to degradation. Over the past two decades, marine coastal sediment has shown an increasing amount of microplastics being a sort of trap for debris wastes or chemicals. In such an environment some species may be successful candidates to be used as monitors of environmental and health hazards and can be considered a mirror of threats of natural habitats. Such species play a key role in the food web of littoral systems since they are litter-feeders, and are prey for fishes or higher trophic level species. A preliminary investigation was conducted on five species of small-sized amphipod cru…

0106 biological sciencesMicroplasticsmarine litterHealth Toxicology and MutagenesisFaunaMarine life010501 environmental scienceslcsh:Chemical technologyToxicologycoastal areas010603 evolutionary biology01 natural sciencesArticleplastic pollutionMediterranean seaMarine debrisMediterranean Sealcsh:TP1-11850105 earth and related environmental sciencesTrophic levelChemical Health and Safetyplastic pollution; marine litter; coastal areas; Crustacea Amphipoda; Mediterranean SeaEcologyFood webCrustacea AmphipodaEnvironmental sciencePlastic pollutionToxics
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Phylogenetic evidence for hybrid origins of asexual lineages in an aphid species

2003

International audience; Understanding the mode of origin of asexuality is central to ongoing debates concerning the evolution and maintenance of sexual reproduction in eukaryotes. This is because it has profound consequences for patterns of genetic diversity and ecological adaptability of asexual lineages, hence on the outcome of competition with sexual relatives both in short and longer terms. Among the possible routes to asexuality, hybridization is a very common mechanism in animals and plants. Aphids present frequent transitions from their ancestral reproductive mode (cyclical parthenogenesis) to permanent asexuality, but the mode of origin of asexual lineages is generally not known bec…

0106 biological sciencesMitochondrial DNAHeterozygoteEvolution of sexual reproduction[SDV]Life Sciences [q-bio]Parthenogenesis010603 evolutionary biology01 natural sciencesAsexualityRhopalosiphum padiEvolution Molecular03 medical and health sciencesReproduction AsexualGeneticsAnimalsCluster AnalysisAllele sequence divergenceHybridizationPhylogenyPolymorphism Single-Stranded ConformationalEcology Evolution Behavior and Systematics030304 developmental biologyGeneticsAphidLikelihood Functions0303 health sciencesbiologyPhylogenetic treeModels GeneticParthenogenesisSequence Analysis DNAbiology.organism_classificationNuclear DNASexual reproductionEvolution of sexAphids[SDE]Environmental SciencesHybridization GeneticGeneral Agricultural and Biological SciencesMicrosatellite Repeats
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Morphological modularity and assessment of developmental processes within the vole dental row (Microtus arvalis, Arvicolinae, Rodentia).

2009

10 pages; International audience; Knowledge of mammalian tooth formation is increasing, through numerous genetic and developmental studies. The prevalence of teeth in fossil remains has led to an intensive description of evolutionary patterns within and among lineages based on tooth morphology. The extent to which developmental processes have influenced tooth morphologies and therefore the role of these processes in these evolutionary patterns are nonetheless challenging. Recent methodological advances have been proposed allowing the inference of developmental processes from adult morphologies and the characterization of the degree of developmental integration/modularity of morphological tr…

0106 biological sciencesMolarMorphogenesisZoology[SDV.BID]Life Sciences [q-bio]/Biodiversity010603 evolutionary biology01 natural sciencesModularity03 medical and health sciencesstomatognathic systemMorphogenesisAnimals[ SDV.BDD ] Life Sciences [q-bio]/Development BiologyMicrotus[SDV.BDD]Life Sciences [q-bio]/Development BiologyEcology Evolution Behavior and Systematics030304 developmental biology[ SDV.BID ] Life Sciences [q-bio]/Biodiversity0303 health sciencesbiologyArvicolinaebiology.organism_classificationTooth morphologyArvicolinaeVoleToothDevelopmental Biology
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Survey on the presence of non-dioxine-like PCBs (NDL-PCBs) in loggerhead turtles (Caretta caretta) stranded in south Mediterranean coasts (Sicily, So…

2017

A total of 71 loggerhead turtles (Caretta caretta) stranded along the coasts of Sicily (Southern Italy) were examined for non-dioxine like polychlorinated biphenyl (NDL-PCB) levels in muscle and adipose tissue by a gas chromatography-mass spectrometry/mass spectrometry (GC-MS/MS) method. The results revealed 6 high-indicator congener (∑6 PCBIND ) levels in 45% of the loggerhead turtles examined, with mean values of 980.39 ± 2508.39 ng/g wet weight in adipose tissue and 102.53 ± 238.58 ng/g wet weight in muscle tissue. The hexachloro and heptachloro PCB congeners were the most abundant in both the sample types. The highest NDL-PCB levels were reached in an adipose tissue sample of a loggerhe…

0106 biological sciencesMuscle tissueMediterranean climate010604 marine biology & hydrobiologyHealth Toxicology and MutagenesisZoologyPolychlorinated biphenylAdipose tissueAdipose tissue sample010501 environmental sciencesBiology01 natural scienceslaw.inventionFisherychemistry.chemical_compoundmedicine.anatomical_structureCongenerchemistrylawNdl pcbsmedicineEnvironmental ChemistryTurtle (robot)0105 earth and related environmental sciencesEnvironmental Toxicology and Chemistry
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Adaptation of turnip mosaic potyvirus to a specific niche reduces its genetic and environmental robustness

2020

Robustness is the preservation of the phenotype in the face of genetic and environmental perturbations. It has been argued that robustness must be an essential fitness component of RNA viruses owed to their small and compacted genomes, high mutation rates and living in ever-changing environmental conditions. Given that genetic robustness might hamper possible beneficial mutations, it has been suggested that genetic robustness can only evolve as a side-effect of the evolution of robustness mechanisms specific to cope with environmental perturbations, a theory known as plastogenetic congruence. However, empirical evidences from different viral systems are contradictory. To test how adaptation…

0106 biological sciencesMutation rateNicherobustness010603 evolutionary biology01 natural sciencesMicrobiologyGenome03 medical and health sciencesplant virusVirologythermal fluctuationsAcademicSubjects/MED00860experimental evolutionplastogenetic congruence030304 developmental biologyvirus evolution0303 health sciencesExperimental evolutionbiologyAcademicSubjects/SCI01130AcademicSubjects/SCI02285PotyvirusRobustness (evolution)biology.organism_classificationPhenotypeEvolutionary biologyViral evolutionmutagenesisResearch Article
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Nucleotide Variability at the Acetyl Coenzyme A Carboxylase Gene and the Signature of Herbicide Selection in the Grass Weed Alopecurus myosuroides (H…

2004

Acetyl coenzyme A carboxylase (ACCase) is the target of highly effective herbicides. We investigated the nucleotide variability of the ACCase gene in a sample of 18 black-grass (Alopecurus myosuroides [Huds.]) populations to search for the signature of herbicide selection. Sequencing 3,396 bp encompassing ACCase herbicide-binding domain in 86 individuals revealed 92 polymorphisms, which formed 72 haplotypes. The ratio of nonsynonymous versus synonymous substitutions was very low, in agreement with ACCase being a vital metabolic enzyme. Within black grass, most nonsynonymous substitutions were related to resistance to ACCase-inhibiting herbicides. Differentiation between populations was stro…

0106 biological sciencesNonsynonymous substitutionMolecular Sequence DataStatistics as TopicBiologyGenes PlantPoaceae01 natural sciencesLinkage DisequilibriumNucleotide diversity03 medical and health sciences[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyGeneticsVULPIN[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular BiologyGeneAllelesPhylogenyComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biologychemistry.chemical_classificationGenetics0303 health sciencesPolymorphism GeneticBase SequenceModels GeneticHaplotypeAlopecurus myosuroidesGenetic VariationDNASequence Analysis DNAPesticidebiology.organism_classificationProtein Structure TertiaryEnzymeHaplotypeschemistrySoftwareAcetyl-CoA Carboxylase010606 plant biology & botanyMolecular Biology and Evolution
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Can Deliberately Incomplete Gene Sample Augmentation Improve a Phylogeny Estimate for the Advanced Moths and Butterflies (Hexapoda: Lepidoptera)?

2011

Abstract This paper addresses the question of whether one can economically improve the robustness of a molecular phylogeny estimate by increasing gene sampling in only a subset of taxa, without having the analysis invalidated by artifacts arising from large blocks of missing data. Our case study stems from an ongoing effort to resolve poorly understood deeper relationships in the large clade Ditrysia ( > 150,000 species) of the insect order Lepidoptera (butterflies and moths). Seeking to remedy the overall weak support for deeper divergences in an initial study based on five nuclear genes (6.6 kb) in 123 exemplars, we nearly tripled the total gene sample (to 26 genes, 18.4 kb) but only in a…

0106 biological sciencesNonsynonymous substitutionNuclear genetaxon samplingStatistics as TopicGenes Insect010603 evolutionary biology01 natural sciencesmolecular phylogeneticsGenetic Heterogeneitymissing data03 medical and health sciencesDitrysiaGeneticsAnimalsGelechioideaPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesbiologyNucleotidesHexapodaClassificationnuclear genesbiology.organism_classificationMissing dataLepidopteragene samplingTaxonMacrolepidopteraEvolutionary biologyMolecular phylogeneticsDitrysiaRegular ArticlesSystematic Biology
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Diapause as escape strategy to exposure to toxicants: response of Brachionus calyciforus to arsenic

2016

Invertebrate organisms commonly respond to environmental fluctuation by entering diapause. Production of diapause in monogonont rotifers involves a previous switch from asexual to partial sexual reproduction. Although zooplankton have been used in ecotoxicological assays, often their true vulnerability to toxicants is underestimated by not incorporating the sexual phase. We experimentally analyzed traits involved in sexual reproduction and diapause in the cyclically parthenogenetic freshwater rotifer, Brachionus calyciflorus, exposed to arsenic, a metalloid naturally found in high concentrations in desert zones, focusing on the effectiveness of diapause as an escape response in the face of …

0106 biological sciencesOffspringHealth Toxicology and MutagenesisRotiferachemistry.chemical_elementRotifer010501 environmental sciencesManagement Monitoring Policy and LawDiapauseToxicologyRotífers01 natural sciencesArsenicBrachionus calyciflorusAnimalsArsenicArsènic Toxicologia0105 earth and related environmental sciencesBehavior AnimalbiologyEcology010604 marine biology & hydrobiologyGeneral MedicineParthenogenesisBrachionusbiology.organism_classificationSexual reproductionchemistryWater Pollutants Chemical
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Time to split Salvia s.l. (Lamiaceae) - New insights from Old World Salvia phylogeny.

2017

Abstract Aims Salvia L. is widely known as the largest genus in the mint family. A morphological modification of the androecium (lever-like stamens) was used to support this genus. However, molecular data revealed that Salvia is polyphyletic. Since phylogenetic studies largely underrepresented Old World Salvia species, we filled this gap and combined new data with existing sequences. The aim of our study was the identification of well-supported clades that provide the basis for evolutionary and taxonomic conclusions. Methods We included ITS data (internal transcribed spacer) from 220 Salvia species, 86 of which were sequenced for the first time. Additionally, the highly variable plastid mar…

0106 biological sciencesOld WorldCharacter evolutionGenetic SpeciationFlowersSalviaGenes Plant010603 evolutionary biology01 natural sciencesEvolution MolecularfoodGenusPolyphylyBotanyGeneticsMint familyPlastidsSalviaCladeMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenybiologyPhylogenetic treeBase SequenceSequence Analysis DNAbiology.organism_classificationfood.foodPhenotype010606 plant biology & botanyMolecular phylogenetics and evolution
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NO contributes to cadmium toxicity in Arabidopsis thaliana by mediating an iron deprivation response

2009

Nitric oxide (NO) functions as a cell-signaling molecule in plants. In particular, a role for NO in the regulation of iron homeostasis and in the plant response to toxic metals has been proposed. Here, we investigated the synthesis and the role of NO in plants exposed to cadmium (Cd(2+)), a nonessential and toxic metal. We demonstrate that Cd(2+) induces NO synthesis in roots and leaves of Arabidopsis (Arabidopsis thaliana) seedlings. This production, which is sensitive to NO synthase inhibitors, does not involve nitrate reductase and AtNOA1 but requires IRT1, encoding a major plasma membrane transporter for iron but also Cd(2+). By analyzing the incidence of NO scavenging or inhibition of …

0106 biological sciencesPRIVATION DE FERIronOXYDE NITRIQUE (NO)Arabidopsischemistry.chemical_elementPlant ScienceOxidative phosphorylationBiologyBioinformaticsGenes PlantNitric Oxide01 natural sciencesModels BiologicalPlant RootsNitric oxide[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health scienceschemistry.chemical_compoundGene Expression Regulation PlantArabidopsis thalianaGene030304 developmental biology0303 health sciencesCadmiumARABIDOPSIS THALIANATransporterEndogenous mediatorbiology.organism_classificationCell biologyArticle AddendumUp-RegulationPlant LeavesNG-Nitroarginine Methyl EsterchemistryIron acquisitionResearch Article010606 plant biology & botanyCadmium
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