Search results for "homology"

showing 10 items of 770 documents

Blow-up of the non-equivariant 2+1 dimensional wave map

2014

It has been known for a long time that the equivariant 2+1 wave map into the 2-sphere blows up if the initial data are chosen appropriately. Here, we present numerical evidence for the stability of the blow-up phenomenon under explicit violations of equivariance.

Mathematics::K-Theory and HomologyMathematical analysisOne-dimensional spaceMathematics::Analysis of PDEsEquivariant mapGeneral MedicineStability (probability)Mathematics::Algebraic TopologyMathematical PhysicsMathematics35L67 35L70 65M20 65P10 74H35
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CHEVALLEY COHOMOLOGY FOR KONTSEVICH'S GRAPHS

2005

We introduce the Chevalley cohomology for the graded Lie algebra of polyvector fields on $R^d$. This cohomology occurs naturally in the problem of construction and classification of fomalities on the sapce $ R^d$. Considering only graphs formalities, we define the Chevalley cohomology directly on spaces of graphs. We obtain some simple expressions for the Chevalley coboundary operator and we give examples and applications.

Mathematics::K-Theory and Homology[MATH.MATH-MP]Mathematics [math]/Mathematical Physics [math-ph]Mathematics::Quantum AlgebraMathematics::Rings and Algebras[ MATH.MATH-MP ] Mathematics [math]/Mathematical Physics [math-ph][MATH.MATH-MP] Mathematics [math]/Mathematical Physics [math-ph]Mathematics::Representation TheoryMathematics::Algebraic Topology
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SPECTRAL INVARIANCE FOR CERTAIN ALGEBRAS OF PSEUDODIFFERENTIAL OPERATORS

2001

We construct algebras of pseudodifferential operators on a continuous family groupoid G that are closed under holomorphic functional calculus, contain the algebra of all pseudodifferential operators of order 0 on G as a dense subalgebra, and reflect the smooth structure of the groupoid G, when G is smooth. As an application, we get a better understanding on the structure of inverses of elliptic pseudodifferential operators on classes of non-compact manifolds. For the construction of these algebras closed under holomorphic functional calculus, we develop three methods: one using two-sided semi-ideals, one using commutators, and one based on Schwartz spaces on the groupoid.

Mathematics::Operator AlgebrasPseudodifferential operatorsGeneral Mathematics010102 general mathematicsMathematics - Operator Algebras01 natural sciencesMathematics - Spectral TheoryAlgebraMathematics Subject ClassificationOperator algebraMathematics::K-Theory and Homology0103 physical sciencesFOS: Mathematics010307 mathematical physics0101 mathematicsOperator Algebras (math.OA)Construct (philosophy)Spectral Theory (math.SP)Mathematics::Symplectic GeometryMathematicsJournal of the Institute of Mathematics of Jussieu
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Cohomology and associated deformations for not necessarily co-associative bialgebras

1992

In this Letter, a cohomology and an associated theory of deformations for (not necessarily co-associative) bialgebras are studied. The cohomology was introduced in a previous paper (Lett. Math. Phys.25, 75–84 (1992)). This theory has several advantages, especially in calculating cohomology spaces and in its adaptability to deformations of quasi-co-associative (qca) bialgebras and even quasi-triangular qca bialgebras.

Mathematics::Rings and AlgebrasComplex systemStatistical and Nonlinear PhysicsDeformation (meteorology)Mathematics::Algebraic TopologyCohomologyAlgebraMathematics::K-Theory and HomologyMathematics::Category TheoryMathematics::Quantum AlgebraEquivariant cohomologyAlgebra over a fieldMathematical PhysicsAssociative propertyMathematicsLetters in Mathematical Physics
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Cloning of Two Putative Ecdysteroid Receptor Isoforms from Tenebrio Molitor and their Developmental Expression in the Epidermis during Metamorphosis

1997

Using the Drosophila EcR-B1 cDNA as a probe, we have cloned the putative ecdysteroid receptor from the mealworm Tenebrio molitor. We have isolated two cDNAs with different 5' termini that contain a complete open reading frame. These two cDNAs encode two proteins with distinct N-terminal regions corresponding to two isoforms. The coleopteran receptor is obviously related to the ecdysteroid receptor of other insects, but shares only 89% and 61% amino acid identities with the DNA-binding and ligand-binding domains of the Drosophila receptor, respectively. Its expression pattern has been examined in the epidermis during the last larval instar and pupal stage of T. molitor, in correlation with t…

MealwormGene isoformReceptors SteroidDNA Complementaryanimal structuresInvertebrate Hormonesmedia_common.quotation_subjectMolecular Sequence DataBiochemistrychemistry.chemical_compoundHemolymphComplementary DNABotanyHemolymphAnimalsAmino Acid SequenceRNA MessengerCloning MolecularMetamorphosisTenebriomedia_commonEcdysteroidBase SequenceSequence Homology Amino AcidbiologyfungiMetamorphosis BiologicalPupaGene Expression Regulation DevelopmentalSequence Analysis DNABlotting Northernbiology.organism_classificationCell biologyOpen reading frameDrosophila melanogasterEcdysteronechemistryLarvaEpidermisEcdysone receptorEuropean Journal of Biochemistry
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Glial expression of Swiss cheese (SWS), the Drosophila orthologue of neuropathy target esterase (NTE), is required for neuronal ensheathment and func…

2016

ABSTRACT Mutations in Drosophila Swiss cheese (SWS) or its vertebrate orthologue neuropathy target esterase (NTE), respectively, cause progressive neuronal degeneration in Drosophila and mice and a complex syndrome in humans that includes mental retardation, spastic paraplegia and blindness. SWS and NTE are widely expressed in neurons but can also be found in glia; however, their function in glia has, until now, remained unknown. We have used a knockdown approach to specifically address SWS function in glia and to probe for resulting neuronal dysfunctions. This revealed that loss of SWS in pseudocartridge glia causes the formation of multi-layered glial whorls in the lamina cortex, the firs…

Medicine (miscellaneous)lcsh:MedicineAxonal degenerationSynaptic Transmission0302 clinical medicineImmunology and Microbiology (miscellaneous)Drosophila ProteinsNeurons0303 health sciencesGene knockdownCell Deathmusculoskeletal neural and ocular physiologyPhototaxisAnatomyCell biologymedicine.anatomical_structureDrosophila melanogasterPhospholipasesGene Knockdown TechniquesNeurogliaNeurogliaDrosophila Proteinpsychological phenomena and processesResearch Articlelcsh:RB1-214Programmed cell deathNeuriteNeuroscience (miscellaneous)Nerve Tissue ProteinsNeuropathy target esteraseNeurotransmissionBiologyMotor ActivityGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesPNPLA6mental disordersNeuropilmedicineNeuriteslcsh:PathologyAnimalsPhospholipaseCell Shape030304 developmental biologySequence Homology Amino AcidSpastic paraplegialcsh:R302Reproducibility of ResultsEnsheathing gliabody regionsnervous systemVacuolesbiology.proteinCarboxylic Ester Hydrolases030217 neurology & neurosurgeryDisease Models & Mechanisms
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Evolutionary conservation of the structural, pharmacological, and genomic characteristics of the melanocortin receptor subtypes

2005

We have cloned melanocortin receptors (MCRs) from several species of fish. The MC4R and MC5R subtypes arose early in vertebrate evolution and their primary structure is remarkably conserved. Expression and pharmacological characterization of the MCRs in fish has revealed that they bind and respond to melanocortin peptides with high potency. Detailed characterization of the binding properties of the different subtypes suggests that MCRs in early vertebrates had preference for adrenocorticotropic hormone (ACTH) peptides, while the high sensitivity for the shorter proopiomelanocortin (POMC) products, such as the alpha-, beta-, and gamma-melanocyte-stimulating hormone (MSH), has appeared later,…

Melanocyte-stimulating hormonePhysiologyMolecular Sequence DataBiochemistryConserved sequenceEvolution MolecularCellular and Molecular NeuroscienceEndocrinologyProopiomelanocortinMelanocortin receptorbiology.animalAnimalsHumansAmino Acid SequenceReceptorConserved SequenceG protein-coupled receptorGeneticsbiologyReceptors MelanocortinVertebrateGenomicsStructural Homology Proteinbiology.proteinMelanocortinhormones hormone substitutes and hormone antagonistsPeptides
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Active Fragments from Pro- and Antiapoptotic BCL-2 Proteins Have Distinct Membrane Behavior Reflecting Their Functional Divergence

2010

International audience; BACKGROUND:The BCL-2 family of proteins includes pro- and antiapoptotic members acting by controlling the permeabilization of mitochondria. Although the association of these proteins with the outer mitochondrial membrane is crucial for their function, little is known about the characteristics of this interaction.METHODOLOGY/PRINCIPAL FINDINGS:Here, we followed a reductionist approach to clarify to what extent membrane-active regions of homologous BCL-2 family proteins contribute to their functional divergence. Using isolated mitochondria as well as model lipid Langmuir monolayers coupled with Brewster Angle Microscopy, we explored systematically and comparatively the…

Membrane lipidsLipid BilayersMolecular Sequence Databcl-X Proteinlcsh:MedicineApoptosisBiologyCell LineProtein–protein interactionMembrane LipidsMice03 medical and health sciences0302 clinical medicineProtein structureMembrane activityAnimalsHumansAmino Acid Sequence[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]lcsh:ScienceLipid bilayerInner mitochondrial membranebcl-2-Associated X Protein030304 developmental biologyMice KnockoutMicroscopy0303 health sciencesMultidisciplinarySequence Homology Amino Acidlcsh:RCytochromes cCell Biology/Cellular Death and Stress ResponsesFibroblastsPeptide FragmentsMitochondriaCell biologyBiochemistry/Molecular EvolutionMembrane proteinBiophysics/Membrane Proteins and Energy Transductionlcsh:QHydrophobic and Hydrophilic Interactions030217 neurology & neurosurgeryFunctional divergenceResearch ArticleBH3 Interacting Domain Death Agonist ProteinProtein BindingPLoS ONE
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Origin of metazoan stem cell system in sponges: first approach to establish the model (Suberites domuncula).

2003

Abstract It is established that Porifera (sponges) represent the earliest phylum which branched off from the common ancestor of all multicellular animals, the Urmetazoa. In the present study, the hypothesis is tested if, during this transition, pluripotent stem cells were formed which are provided—similar to the totipotent cells (archaeocytes/germ cells)—with a self-renewal capacity. As a model system, primmorphs from the sponge Suberites domuncula were used. These 3D-cell aggregates were cultivated in medium (RPMI 1640/seawater) either lacking silicate and ferric iron or in medium which was supplemented with these ‘morphogenetic’ factors. As molecular markers for the potential existence of…

MesodermMolecular Sequence DataBioengineeringFerric CompoundsEvolution MolecularSequence Analysis ProteinmedicineAnimalsAmino Acid SequenceNogginInduced pluripotent stem cellMolecular BiologyGeneCells CulturedPhylogenybiologySequence Homology Amino AcidGene Expression ProfilingSilicatesStem CellsMesenchymal stem cellGene Expression Regulation DevelopmentalMembrane ProteinsProteinsAnatomybiology.organism_classificationCell biologyPoriferaSuberites domunculaSpongemedicine.anatomical_structureModels AnimalStem cellCarrier ProteinsBiotechnologyBiomolecular engineering
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Genes and derived amino acid sequences of S-layer proteins from mesophilic, thermophilic, and extremely thermophilic methanococci

2002

Cells of methanococci are covered by a single layer of protein subunits (S-layer) in hexagonal arrangement, which are directly exposed to the environment and which cannot be stabilized by cellular components. We have isolated S-layer proteins from cells of Methanococcus vannielii ( T(opt.)=37 degrees C), Methanococcus thermolithotrophicus ( T(opt.)=65 degrees C), and Methanococcus jannaschii ( T(opt.)=85 degrees C). The primary structure of the S-layer proteins was determined by sequencing the corresponding genes. According to the predicted amino acid sequence, the molecular masses of the S-layer proteins of the different methanococci are in a small range between 59,064 and 60,547 Da. Compa…

MethanococcusArchaeal ProteinsMethanococcusMolecular Sequence DataMicrobiologySpecies SpecificityMethanococcalesAmino Acid SequencePeptide sequencechemistry.chemical_classificationSequence Homology Amino AcidbiologyThermophileTemperatureProtein primary structureGeneral Medicinebiology.organism_classificationMethanococciAmino acidchemistryBiochemistryGenes BacterialMolecular MedicineSequence AlignmentS-layerBacterial Outer Membrane ProteinsExtremophiles
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