Search results for "horizon"

Reuse of urban-treated wastewater from a pilot-scale horizontal subsurface flow system in Sicily (Italy) for irrigation of Bermudagrass (Cynodon dact…

2016

Constructed wetlands (CW) are one of the most important biological technology for the treatment and reuse of wastewaters. The aim of this study was to evaluate the reuse of treated wastewater (TWW) from CW for irrigation of Bermudagrass turf (Cynodon dactylon (L.) Pers.) and assess the effects of TWW on the biometric and qualitative parameters of the turfgrass and on chemical–physical soil properties. The research was carried out in Sicily (Italy) in a pilot-scale horizontal subsurface flow system which was fed with urban TWW following secondary treatment from an activate sludge wastewater treatment plant. The pilot-system included three separate parallel units. The outflow TWW flowed downh…

Genome sequence of the pea aphid Acyrthosiphon pisum

2010

The genome of the pea aphid shows remarkable levels of gene duplication and equally remarkable gene absences that shed light on aspects of aphid biology, most especially its symbiosis with Buchnera.

2020

Abstract Lichens are valuable models in symbiosis research and promising sources of biosynthetic genes for biotechnological applications. Most lichenized fungi grow slowly, resist aposymbiotic cultivation, and are poor candidates for experimentation. Obtaining contiguous, high-quality genomes for such symbiotic communities is technically challenging. Here, we present the first assembly of a lichen holo-genome from metagenomic whole-genome shotgun data comprising both PacBio long reads and Illumina short reads. The nuclear genomes of the two primary components of the lichen symbiosis—the fungus Umbilicaria pustulata (33 Mb) and the green alga Trebouxia sp. (53 Mb)—were assembled at contiguit…

Humusica 1, article 1: Essential bases – Vocabulary

2018

International audience; The Special Issue Humusica 1 corresponds to a field guide for the classification of terrestrial humus systems and forms. The present first article of the issue defines vocabulary, objects and concepts necessary for: (a) field investigation, (b) understanding the process of classification, (c) assigning ecological significance to the defined morpho-functional units, (d) discussing and exchanging scientific data about humus systems. The article starts with general considerations, as the necessity humans have to classify natural objects for sharing ideas and information on them. Then the article focuses on soil as functional element of every ecosystem. Historical and re…

Cucumispora dikerogammari n. gen. (Fungi: Microsporidia) infecting the invasive amphipod Dikerogammarus villosus: a potential emerging disease in Eur…

2010

SUMMARYDikerogammarus villosusis an invasive amphipod that recently colonized the main rivers of Central and Western Europe. Two frequent microsporidian parasites were previously detected in this species, but their taxonomic status was unclear. Here we present ultrastructural and molecular data indicating that these two parasites are in fact a single microsporidian species. This parasite shares numerous characteristics ofNosemaspp. It forms elongate spores (cucumiform), developing in direct contact with host cell cytoplasm; all developmental stages are diplokaryotic and the life cycle is monomorphic with disporoblastic sporogony. Initially this parasite was described asNosema dikerogammariO…

Evolutionary Changes after Translational Challenges Imposed by Horizontal Gene Transfer

2019

International audience; Genes acquired by horizontal gene transfer (HGT) may provide the recipient organism with potentially new functions, but proper expression level and integration of the transferred genes in the novel environment are not granted. Notably, transferred genes can differ from the receiving genome in codon usage preferences, leading to impaired translation and reduced functionality. Here, we characterize the genomic and proteomic changes undergone during experimental evolution of Escherichia coli after HGT of three synonymous versions, presenting very different codon usage preference, of an antibiotic resistance gene. The experimental evolution was conducted with and without…

Soil properties and tree growth along an altitudinal transect in Ecuadorian tropical montane forest

2008

In tropical montane forests, soil properties change with increasing altitude, and tree-growth decreases. In a tropical montane forest in Ecuador, we determined soil and tree properties along an altitudinal transect between 1960 and 2450 m asl. In different vegetation units, all horizons of three replicate profiles at each of eight sites were sampled and height, basal area, and diameter growth of trees were recorded. We determined pH and total concentrations of Al, C, Ca, K, Mg, Mn, N, Na, P, S, Zn, polyphenols, and lignin in all soil horizons and in the mineral soil additionally the effective cation-exchange capacity (CEC). The soils were Cambisols, Planosols, and Histosols. The concentrati…

Cost-efficient strategies to preserve dead wood-dependent species in a managed forest landscape

2016

Negative consequences of intensive forest management on biodiversity are often mitigated by setting aside old forest, but alternative strategies have been suggested. We have compared using simulations the consequences of two of these alternatives setting aside young forests or extending rotation periods - to that of current practice in managed boreal forest In all scenarios we applied a constant conservation budget and predicted forest development and harvesting over 200 years. As a proxy for biodiversity conservation, we projected the extinction risk of a dead wood-dependent beetle, Diacanthous undulatus, in a 50 km(2) landscape in central Sweden, using a colonization-extinction model. Dur…

The why, the how and the when of PGS 2.0

2016

STUDY QUESTION: We wanted to probe the opinions and current practices on preimplantation genetic screening (PGS), and more specifically on PGS in its newest form: PGS 2.0? STUDY FINDING: Consensus is lacking on which patient groups, if any at all, can benefit from PGS 2.0 and, a fortiori, whether all IVF patients should be offered PGS. WHAT IS KNOWN ALREADY: It is clear from all experts that PGS 2.0 can be defined as biopsy at the blastocyst stage followed by comprehensive chromosome screening and possibly combined with vitrification. Most agree that mosaicism is less of an issue at the blastocyst stage than at the cleavage stage but whether mosaicism is no issue at all at the blastocyst st…

Complexity of gap junctions between horizontal cells of the carp retina.

2016

In the vertebrate retina, horizontal cells (HCs) reveal homologous coupling by gap junctions (gj), which are thought to consist of different connexins (Cx). However, recent studies in mouse, rabbit and zebrafish retina indicate that individual HCs express more than one connexin. To provide further insights into the composition of gj connecting HCs and to determine whether HCs express multiple connexins, we examined the molecular identity and distribution of gj between HCs of the carp retina. We have cloned four carp connexins designated Cx49.5, Cx55.5, Cx52.6 and Cx53.8 with a close relationship to connexins previously reported in HCs of mouse, rabbit and zebrafish, respectively. Using in s…