Search results for "hydrogenase"

showing 10 items of 575 documents

TBBPA causes neurotoxic and the apoptotic responses in cultured mouse hippocampal neurons in vitro

2015

Abstract Background Tetrabromobisphenol A (TBBPA) is a brominated flame retardant widely used in a variety of commercial and household products. TBBPA can become bioaccumulated in human body fluids, and also in different brain regions. The aim of the present study was to determine the viability and apoptosis of cultured mouse hippocampal neurons in vitro after exposure to TBBPA. Additionally, we examined the involvement of ROS generation in the effect of TBBPA. Methods Primary hippocampal neuron cultures were prepared from Swiss mouse embryos on day 17/18 of gestation. The cultures were treated with TBBPA at concentrations ranging from 1 nM to 100 μM for 30 min or 3, 6 or 24 h. To study apo…

Polybrominated BiphenylsApoptosis010501 environmental sciencesHippocampal formationBiology01 natural sciencesHippocampus03 medical and health scienceschemistry.chemical_compoundMice0302 clinical medicineLactate dehydrogenaseAnimalsCells Cultured0105 earth and related environmental sciencesFlame RetardantsPharmacologyNeuronsDose-Response Relationship DrugGeneral MedicineApoptotic bodyMolecular biologyIn vitrochemistryApoptosisEnvironmental chemistryBrominated flame retardantTetrabromobisphenol A030217 neurology & neurosurgeryIntracellularPharmacological Reports
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Effects of indole-3-acetic acid on Sinorhizobium meliloti survival and on symbiotic nitrogen fixation and stem dry weight production

2009

We evaluated the effects of the main auxin phytohormone, indole-3-acetic acid (IAA), on the central metabolism of Sinorhizobium meliloti strain 1021. We either treated the Sinorhizobium meliloti 1021 strain with 0.5 mM IAA (1021+) or use a derivative, RD64, of the same strain harbouring a pathway for IAA biosynthesis converting tryptophan into IAA via indoleacetamide. We assayed the activity of key enzymes in the major energy-yielding pathways (Entner-Doudoroff, Embden-Meyerhof-Parnas, pentose phosphate, glyoxylate bypass and tricarboxylic acid cycle). We found that activity of two main regulative tricarboxylic acid (TCA) cycle enzymes was increased. Citrate synthase (CS) activity, as compa…

PolyestersHydroxybutyratesDehydrogenaseCitrate (si)-SynthaseApplied Microbiology and BiotechnologyCell survival . PHB . TCA . Nitrogen fixationchemistry.chemical_compoundBacterial ProteinsPlant Growth RegulatorsAcetyl Coenzyme AAuxinNitrogen FixationMedicago truncatulaCitrate synthaseKetoglutarate Dehydrogenase ComplexBiomasschemistry.chemical_classificationSinorhizobium melilotiMicrobial ViabilityIndoleacetic AcidsPlant StemsbiologyTryptophanfood and beveragesGeneral MedicineMetabolismbiology.organism_classificationCitric acid cycleBiochemistrychemistrybiology.proteinIndole-3-acetic acidSinorhizobium melilotiBiotechnologyApplied Microbiology and Biotechnology
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Co-transfection of star-shaped PDMAEMAs enhance transfection efficiency of protamine/pDNA complexes in the presence of serum

2018

Abstract In previous studies, we have found that un-complexed free cationic polymers greatly promote gene transfection efficiency of pDNA complexes. Dividing the gene transfection system into two parts, bound chains and free chains, we exploited mixing different biomaterials as the second component of our designed system to improve gene transfection outcome. In this study, we investigated the effectiveness of star-shaped poly(2-(dimethylamino)ethyl methacrylate) (PDMAEMA) with different arm numbers as free chains (i.e., co-transfection agent) while using natural salmon protamine as bound chains. We explored the gene transfer ability of the system in both serum free and complete cell culture…

Polymers and Plasticsmedia_common.quotation_subjectGeneral Physics and Astronomy02 engineering and technologyGene delivery010402 general chemistry01 natural sciencesFlow cytometrychemistry.chemical_compoundLactate dehydrogenaseMaterials ChemistrymedicineCytotoxicityInternalizationmedia_commonmedicine.diagnostic_testbiologyChemistryOrganic ChemistryTransfection021001 nanoscience & nanotechnologyProtamine0104 chemical sciencesCell cultureBiophysicsbiology.protein0210 nano-technologyEuropean Polymer Journal
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Conflicting molecular phylogenies of European long-eared bats (Plecotus) can be explained by cryptic diversity

2002

Abstract Conflicting phylogenetic signals of two data sets that analyse different portions of the same molecule are unexpected and require an explanation. In the present paper we test whether (i) differential evolution of two mitochondrial genes or (ii) cryptic diversity can better explain conflicting results of two recently published molecular phylogenies on the same set of species of long-eared bats (genus Plecotus). We sequenced 1714 bp of three mitochondrial regions (16S, ND1, and D-loop) of 35 Plecotus populations from 10 European countries. A likelihood ratio test revealed congruent phylogenetic signals of the three data partitions. Our phylogenetic analyses demonstrated that the exis…

Polymorphism GeneticTime FactorsGeographyPhylogenetic treeLineage (evolution)Plecotus macrobullarisZoologyNADH DehydrogenaseSequence Analysis DNABiologybiology.organism_classificationEvolution MolecularPhylogeneticsChiropteraRNA Ribosomal 16SGeneticsAnimalsInsect ProteinsPlecotus auritusPlecotusMolecular clockMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsPlecotus austriacusMolecular Phylogenetics and Evolution
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Phospholipidosis and down-regulation of the PI3-K/PDK-1/Akt signalling pathway are vitamin E inhibitable events associated with 7-ketocholesterol-ind…

2007

International audience; Among the oxysterols accumulating in atherosclerotic plaque, 7-ketocholesterol (7KC) is a potent apoptotic inducer, which favours myelin figure formation and polar lipid accumulation. This investigation performed on U937 cells consisted in characterizing the myelin figure formation process; determining the effects of 7KC on the PI3-K/PDK-1/Akt signalling pathway; evaluating the activities of vitamin E (Vit-E) (α-tocopherol) on the formation of myelin figures and the PI3-K/PDK-1/Akt signalling pathway and assessing the effects of PI3-K inhibitors (LY-294002, 3-methyladenine) on the activity of Vit-E on cell death and polar lipid accumulation. The ultrastructural and b…

Programmed cell deathOxysterolEndocrinology Diabetes and MetabolismClinical BiochemistryDown-RegulationApoptosisPyrimidinones[SDV.BC]Life Sciences [q-bio]/Cellular BiologyProtein Serine-Threonine KinasesBiochemistryDephosphorylationPhosphatidylinositol 3-Kinases03 medical and health sciences0302 clinical medicineMicroscopy Electron TransmissionOxazinesHumansVitamin EKetocholesterolsMolecular BiologyProtein kinase BPhospholipids030304 developmental biologyPhospholipidosis0303 health sciencesNutrition and DieteticsPhosphoinositide 3-kinasebiologyChemistryPyruvate Dehydrogenase Acetyl-Transferring KinaseU937 CellsProtein phosphatase 2Cell biology030220 oncology & carcinogenesisbiology.proteinBenzimidazolesSignal transductionProto-Oncogene Proteins c-aktSignal TransductionThe Journal of Nutritional Biochemistry
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Initial Biological Assessment of Upconversion Nanohybrids

2021

Nanoparticles for medical use should be non-cytotoxic and free of bacterial contamination. Upconversion nanoparticles (UCNPs) coated with cucurbit[7]uril (CB[7]) made by combining UCNPs free of oleic acid, here termed bare UCNPs (UCn), and CB[7], i.e., UC@CB[7] nanohybrids, could be used as photoactive inorganic-organic hybrid scaffolds for biological applications. UCNPs, in general, are not considered to be highly toxic materials, but the release of fluorides and lanthanides upon their dissolution may cause cytotoxicity. To identify potential adverse effects of the nanoparticles, dehydrogenase activity of endothelial cells, exposed to various concentrations of the UCNPs, was determined. Da…

Programmed cell deathQH301-705.5Medicine (miscellaneous)Nanoparticle02 engineering and technology010402 general chemistry01 natural sciencesArticleGeneral Biochemistry Genetics and Molecular BiologyHeLachemistry.chemical_compoundLysosomeLactate dehydrogenasemedicineBiology (General)Cytotoxicitybiology021001 nanoscience & nanotechnologybiology.organism_classificationPhoton upconversion0104 chemical sciencescucurbiturilupconversion nanoparticlesmedicine.anatomical_structurechemistryApoptosisBiophysicscytotoxicity0210 nano-technologyBiomedicines
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Peroxisomal and mitochondrial status of two murine oligodendrocytic cell lines (158N, 158JP): potential models for the study of peroxisomal disorders…

2009

International audience; In some neurodegenerative disorders (leukodystrophies) characterized by myelin alterations, the defect of peroxisomal functions on myelin-producing cells (oligodendrocytes) are poorly understood. The development of in vitro models is fundamental to understanding the physiopathogenesis of these diseases. We characterized two immortalized murine oligodendrocyte cell lines: a normal (158N) and a jimpy (158JP) cell line mutated for the proteolipid protein PLP/DM20. Fluorescence microscopy, flow cytometry, and western blotting analysis allow to identify major myelin proteins (PLP colocalizing with mitochondria; myelin basic protein), oligodendrocyte (CNPase and myelin oli…

Proteolipid protein 1BiochemistryMiceMyelinMESH : PhenylbutyratesperoxisomeIsomerasesMESH : Myelin Basic ProteinsEnoyl-CoA HydrataseCell Line TransformedUltrasonographybiologyMESH : Gene Expression RegulationMESH : Myelin Proteolipid Protein3-Hydroxyacyl CoA DehydrogenasesMESH : Myelin-Associated GlycoproteinMESH : Cell Line TransformedPeroxisomeMESH : Multienzyme ComplexesMESH : OligodendrogliaMESH : Enoyl-CoA HydrataseCatalaseFlow CytometryMESH : 3-Hydroxyacyl CoA DehydrogenasesPhenylbutyratesmitochondriaMyelin-Associated GlycoproteinOligodendrogliamyelinMESH : Antineoplastic Agentsmedicine.anatomical_structureMESH : Microscopy Electron TransmissionBiochemistryACOX1MESH : MitochondriaMESH : Acyl-CoA Oxidase2'3'-Cyclic-Nucleotide PhosphodiesterasesMESH : IsomerasesOxidation-ReductionMyelin ProteinsMESH : Flow CytometryAntineoplastic AgentsPeroxisomal Bifunctional EnzymeStatistics NonparametricMyelin oligodendrocyte glycoproteinCellular and Molecular NeuroscienceMicroscopy Electron TransmissionMultienzyme ComplexesMESH : CatalaseMESH : MicePeroxisomesmedicineAnimalsMESH : ATP-Binding Cassette TransportersMyelin Proteolipid ProteinMESH : Statistics Nonparametric[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular BiologyMESH : Oxidation-ReductionMyelin Basic Proteinmurine oligodendrocytesMESH : 2'3'-Cyclic-Nucleotide PhosphodiesterasesPeroxisomal transportOligodendrocyteMyelin basic proteinGene Expression Regulationbiology.proteinATP-Binding Cassette TransportersMyelin-Oligodendrocyte GlycoproteinAcyl-CoA OxidaseMESH : AnimalsMESH : Peroxisomes
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Definitive host influences the proteomic profile of excretory/secretory products of the trematode Echinostoma caproni

2016

Background Echinostoma caproni is an intestinal trematode extensively used as experimental model for the study of factors that determine the course of intestinal helminth infections, since this markedly depends on the host species. Although the host-dependent mechanisms for either chronic establishment or early parasite rejection have been broadly studied, little is known regarding the parasite response against different host environments. Methods To identify host-dependent differentially expressed proteins, a comparative proteomic analysis of the excretory/secretory products released from E. caproni adults, isolated from hosts displaying different compatibility with this trematode, was per…

Proteomics0301 basic medicineProteomeHelminth proteinEchinostoma caproniMalate dehydrogenaseHydroxyacylglutathione hydrolaseMicrobiologyCathepsin LMice03 medical and health sciencesExcretory/secretory productsIntestinal mucosaEchinostomaHelminthAnimalsHelminthsbiologyResearchHelminth Proteinsbiology.organism_classificationRatsProteome plasticity2-dimensional gel electrophoresis030104 developmental biologyInfectious DiseasesExcretory systemHost-Pathogen InteractionsImmunologybiology.proteinParasitologyEchinostomaParasites & Vectors
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Dependence of enzyme reaction mechanism on protonation state of titratable residues and QM level description: lactate dehydrogenase

2005

We have studied the dependence of the chemical reaction mechanism of L-lactate dehydrogenase (LDH) on the protonation state of titratable residues and on the level of the quantum mechanical (QM) description by means of hybrid quantum-mechanical/molecular-mechanical (QM/MM) methods; this methodology has allowed clarification of the timing of the hydride transfer and proton transfer components that hitherto had not been possible to state definitively. Ferrer Castillo, Silvia, Silvia.Ferrer@uv.es, Silla Santos, Estanislao, Estanislao.Silla@uv.es ; Tuñon Garcia de Vicuña, Ignacio Nilo, Ignacio.Tunon@uv.es

ProtonStereochemistryUNESCO::QUÍMICATitratable acidDehydrogenaseProtonationChemical reactionQM/MM:QUÍMICA [UNESCO]CatalysisSubstrate Specificitychemistry.chemical_compoundComputational chemistryLactate dehydrogenaseMaterials ChemistryDependenceEnzyme reaction mechanismchemistry.chemical_classificationL-Lactate DehydrogenaseMolecular StructureChemistryHydrideUNESCO::QUÍMICA::Química analíticaMetals and AlloysTitrimetryGeneral ChemistryNADL-Lactate dehydrogenaseSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsDependence ; Enzyme reaction mechanism ; Titratable residues ; L-Lactate dehydrogenase ; QM/MMEnzymeCeramics and Composites:QUÍMICA::Química analítica [UNESCO]Titratable residuesProtons
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D-Malic enzyme of Pseudomonas fluorescens.

1982

By the enrichment culture technique 14 gram-negative bacteria and two yeast strains were isolated that used D(+)-malic acid as sole carbon source. The bacteria were identified as Pseudomonas putida, Pseudomonas fluorescens, Pseudomonas aeruginosa and Klebsiella aerogenes. In cell-free extracts of P. fluorescens and P. putida the presence of malate dehydrogenase, D-malic enzyme (NAD-dependent) and L-malic enzyme (NADP-dependent) was demonstrated. D-Malic enzyme from P. fluorescens was purified. Stabilization of the enzyme by 50 mM ammonium sulphate an 1 mM EDTA was essential. Preparation of D-malic enzyme that gave one band with disc gel electrophoresis showed a specific activity of 4-5 U/mg…

Pseudomonas fluorescensEnterobacter aerogenesPseudomonas fluorescensBiochemistryMalate dehydrogenasechemistry.chemical_compoundMalate DehydrogenaseOxaloacetic acidPseudomonasPolyacrylamide gel electrophoresischemistry.chemical_classificationGel electrophoresisChromatographybiologyCell-Free Systemfungifood and beveragesbiology.organism_classificationPseudomonas putidaMolecular WeightKineticsKlebsiella pneumoniaeEnzymechemistryBiochemistryElectrophoresis Polyacrylamide GelEuropean journal of biochemistry
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