Search results for "ionization"

showing 10 items of 1255 documents

A critical appraisal of capillary electrochromatography.

2002

Although still in its infancy, CEC promises some advantages over competitive techniques for separating charged analytes including biomolecules.

Capillary electrochromatographyCritical appraisalSpectrometry Mass Electrospray IonizationChemistryElectrophoresis CapillaryProteinsNanotechnologyEquipment DesignPeptidesChromatography High Pressure LiquidAnalytical ChemistryAnalytical chemistry
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Analysis of Organic Aerosols Using a Micro-Orifice Volatilization Impactor Coupled to an Atmospheric-Pressure Chemical Ionization Mass Spectrometer

2014

We present the development and characterization of a combination of a micro-orifice volatilization impactor (MOVI) and an ion trap mass spectrometer (IT/MS) with an atmospheric-pressure chemical ionization (APCI) source. The MOVI is a multi-jet impactor with 100 nozzles, allowing the collection of aerosol particles by inertial impaction on a deposition plate. The pressure drop behind the nozzles is approximately 5%, resulting in a pressure of 96 kPa on the collection surface for ambient pressures of 101.3 kPa. The cut-point diameter (diameter of 50% collection efficiency) is at 0.13 μm for a sampling flow rate of 10 L min–1. After the collection step, aerosol particles are evaporated by he…

Carboxylic AcidsAnalytical chemistryAtmospheric-pressure chemical ionizationMass spectrometryMass SpectrometryOzoneHumansRelative humiditySpectroscopyBicyclic MonoterpenesAerosolsIonsChemical ionizationChromatographyTerpenesChemistryGeneral MedicineAtomic and Molecular Physics and OpticsAerosolAtmospheric PressureDeposition (aerosol physics)MonoterpenesAerosol mass spectrometryIon trapVolatilizationOxidation-ReductionEuropean Journal of Mass Spectrometry
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Antitumor effects of curcumin and structurally β-diketone modified analogs on multidrug resistant cancer cells

2007

Abstract Using concepts of bioisostery a series of curcumin analogs were synthesized: the diketonic system of the compound was elaborated into enaminones, oximes, and the isoxazole heterocycle. The cell growth inhibitory and apoptosis inducing effects of the new analogs were evaluated by in vitro assays in the hepatocellular carcinoma HA22T/VGH cells, as well as in the MCF-7 breast cancer cell line and in its multidrug resistant (MDR) variant MCF-7R. Increased antitumor activity on all cell lines was found with the isoxazole analog and especially with the benzyl oxime derivative; in the HA22T/VGH cell model, the latter compound inhibited constitutive NF-κB activation.

Cell growth inhibitionSpectrometry Mass Electrospray IonizationCurcuminMagnetic Resonance SpectroscopyMDR breast cancer cellsClinical BiochemistryPharmaceutical ScienceAntineoplastic AgentsBiochemistrychemistry.chemical_compoundCell Line TumorDrug DiscoveryNF-κB inhibitionHumansIsoxazoleCytotoxicityMolecular BiologyChromatography High Pressure LiquidCell growthOrganic ChemistryCell growth inhibition; Curcumin oxime derivatives; MDR breast cancer cells; NF-κB inhibition;KetonesCurcumin oxime derivativesDrug Resistance MultipleMultiple drug resistancechemistryBiochemistryDrug Resistance NeoplasmCell cultureApoptosisCancer cellSettore BIO/14 - FarmacologiaCurcuminMolecular MedicineCellBioorganic & Medicinal Chemistry Letters
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A natural-like synthetic small molecule impairs bcr-abl signaling cascades and induces megakaryocyte differentiation in erythroleukemia cells

2013

Over the past years, we synthesized a series of new molecules that are hybrids of spirocyclic ketones as complexity-bearing cores with bi- and ter-phenyls as privileged fragments. Some of these newly-shaped small molecules showed antiproliferative, pro-apoptotic and differentiating activity in leukemia cell lines. In the present study, to investigate more in depth the mechanisms of action of these molecules, the protein expression profiles of K562 cells treated with or without the compounds IND_S1, MEL_T1, IND_S7 and MEL_S3 were analyzed using two-dimensional gel electrophoresis coupled with mass spectrometry. Proteome comparisons revealed several differentially expressed proteins, mainly r…

Cell signalingProteomeMegakaryocyte differentiationCellular differentiationFusion Proteins bcr-abllcsh:MedicineBiologyProteomicsSmall Molecule Librariesbi- and ter-phenylsantiproliferative pro-apoptotic differentiating activity leukemiaMolecular Cell BiologyChemical BiologyBiomarkers TumorCluster AnalysisHumansnetwork analysiRNA Messengerlcsh:ScienceBiologyCell ShapeMultidisciplinaryGene Expression Regulation LeukemicEffectorSystems Biologylcsh:RleukemiaReproducibility of ResultsHNF4-alphaHematologyMolecular biologyNeoplasm ProteinsChemistrycell differentiationSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationMultivariate AnalysisProteomeMedicineEGR1PROTEOMICSlcsh:QLeukemia Erythroblastic AcuteMedicinal ChemistrySignal transductionK562 CellsMegakaryocytesResearch ArticleSignal TransductionK562 cells
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Rapid and Sensitive Identification of Major Histocompatibility Complex Class I-associated Tumor Peptides by Nano-LC MALDI MS/MS

2005

Identification of major histocompatibility complex (MHC)-associated peptides recognized by T-lymphocytes is a crucial prerequisite for the detection and manipulation of specific immune responses in cancer, viral infections, and autoimmune diseases. Unfortunately immunogenic peptides are less abundant species present in highly complex mixtures of MHC-extracted material. Most peptide identification strategies use microcapillary LC coupled to nano-ESI MS/MS in a challenging on-line approach. Alternatively MALDI PSD analysis has been applied for this purpose. We report here on the first off-line combination of nanoscale (nano) LC and MALDI TOF/TOF MS/MS for the identification of naturally proce…

CellsCellPeptideHuman leukocyte antigenMajor histocompatibility complexSensitivity and SpecificityBiochemistryEpitopeAnalytical ChemistryMajor Histocompatibility ComplexImmune systemCell Line TumormedicineHumansAmino Acid SequenceCarcinoma Renal CellMolecular Biologychemistry.chemical_classificationbiologyHistocompatibility Antigens Class IFlow CytometryMolecular biologyKidney NeoplasmsPeptide FragmentsNeoplasm Proteinsmedicine.anatomical_structurechemistrySpectrometry Mass Matrix-Assisted Laser Desorption-Ionizationbiology.proteinTime-of-flight mass spectrometryAntibodyMolecular & Cellular Proteomics
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Mating-induced differential peptidomics of neuropeptides and protein hormones in Agrotis ipsilon moths

2018

International audience; In many insects, mating induces drastic changes in male and female responses to sex pheromones or host-plant odors. In the male moth Agrotis ipsilon, mating induces a transient inhibition of behavioral and neuronal responses to the female sex pheromone. As neuropeptides and peptide hormones regulate most behavioral processes, we hypothesize that they could be involved in this mating-dependent olfactory plasticity. Here we used next-generation RNA sequencing and a combination of liquid chromatography, matrix assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry, and direct tissue profiling to analyze the transcriptome and peptidome of diffe…

Central Nervous SystemMaleProteomics0301 basic medicinePeptide HormonesCentral nervous systemNeuropeptideAgrotis ipsilonOlfactionsex pheromoneMothsPeptide hormoneBiochemistryTranscriptomeSexual Behavior Animal03 medical and health sciencesSex Factors0302 clinical medicinemedicineAnimalsAgrotis ipsilonmothtransciptomeChromatography High Pressure Liquidreproductive and urinary physiologypeptide predictionmass spectrometrybiology[SDV.BA]Life Sciences [q-bio]/Animal biologyneuropeptidesHigh-Throughput Nucleotide SequencingGeneral Chemistrybiology.organism_classificationCell biologymating030104 developmental biologymedicine.anatomical_structureSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationSex pheromoneplasticityPheromoneFemalePeptides030217 neurology & neurosurgeryolfaction
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RPGR ORF15 isoform co-localizes with RPGRIP1 at centrioles and basal bodies and interacts with nucleophosmin

2005

The ORF15 isoform of RPGR (RPGR(ORF15)) and RPGR interacting protein 1 (RPGRIP1) are mutated in a variety of retinal dystrophies but their functions are poorly understood. Here, we show that in cultured mammalian cells both RPGR(ORF15) and RPGRIP1 localize to centrioles. These localizations are resistant to the microtubule destabilizing drug nocodazole and persist throughout the cell cycle. RPGR and RPGRIP1 also co-localize at basal bodies in cells with primary cilia. The C-terminal (C2) domain of RPGR(ORF15) (ORF15(C2)) is highly conserved across 13 mammalian species, suggesting that it is a functionally important domain. Using matrix-assisted laser desorption ionization time-of-flight mas…

CentrioleFluorescent Antibody TechniqueMicechemistry.chemical_compoundChlorocebus aethiopsGuanine Nucleotide Exchange FactorsProtein IsoformsBasal bodyConserved SequenceGenetics (clinical)CentriolesGlutathione Transferaseintegumentary systemNuclear ProteinsExonsGeneral MedicineRetinitis pigmentosa GTPase regulatorImmunohistochemistryNocodazoleCOS CellsNucleophosminCell NucleolusRecombinant Fusion ProteinsMolecular Sequence DataBiologyOpen Reading FramesMicrotubuleTwo-Hybrid System TechniquesGeneticsAnimalsHumansAmino Acid SequenceEye ProteinsMolecular BiologyNucleophosminSequence Homology Amino AcidProteinsPrecipitin TestsMolecular biologyeye diseasesProtein Structure TertiaryMice Inbred C57BLCytoskeletal ProteinschemistryCentrosomeCytoplasmSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationMutationCattleHeLa CellsHuman Molecular Genetics
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Apprehending ganglioside diversity: a comprehensive methodological approach

2015

Gangliosides make a wide family of glycosphingolipids ubiquitously expressed in mammalian tissues and particularly abundant in the brain and nervous system. They exhibit a huge diversity due to structural variations in both their oligosaccharidic chain and ceramide moiety, which represent a real analytical challenge. Since their discovery in the 1940s, methods have persistently improved until the emergence of Liquid Chromatography/Mass Spectrometry (LC/MS) which offers a high level of specificity and sensitivity and is suitable with high-throughput profiling studies. We describe here a comprehensive approach relying on various techniques and aiming at fully characterizing gangliosides in bi…

CeramideSpectrometry Mass Electrospray IonizationretinaglycolipidsOrganes des sensmolecular species[ SDV.AEN ] Life Sciences [q-bio]/Food and NutritionAbsolute quantificationSensory OrgansRat retinaQD415-436BiologyBiochemistryNervous Systemchemistry.chemical_compoundEndocrinologyGangliosidesLipidomicsMethodsFood and NutritionAnimalsliquid chromatographylc/ms[SDV.MHEP.OS]Life Sciences [q-bio]/Human health and pathology/Sensory Organsmass spectrometryBrain ChemistryGangliosideceramides;glycolipids;glycosphingolipids;lc/ms;lipidomics;liquid chromatography;mass spectrometry;molecular species;retina;sphingolipidssphingolipidsceramidesglycosphingolipidsAssayChromatography liquidBrainCell BiologySphingolipidRatschemistryBiochemistry[ SDV.MHEP.OS ] Life Sciences [q-bio]/Human health and pathology/Sensory OrgansAlimentation et Nutritionlipidomics[SDV.AEN]Life Sciences [q-bio]/Food and NutritionChromatography Liquid
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Isolation of oligopeptides from the water-soluble extract of goat cheese and their identification by mass spectrometry

2001

A procedure for the separation and identification of small peptides from the water-soluble fraction of a goat cheese was developed. The water-soluble extract was ultrafiltered (1000 Da membrane cutoff), and peptides were isolated by sequential chromatography: size exclusion chromatography (HPLC-grade water), anion exchange chromatography (phosphate buffer gradient), and semipreparative reverse-phase high-performance liquid chromatography (water/acetonitrile gradient). The fractions obtained were analyzed by combined mass spectrometry methods including electrospray ionization, liquid secondary ionization, and tandem mass spectrometry to identify and to confirm the sequences of 28 tri- to oct…

Chemical PhenomenaElectrospray ionizationSize-exclusion chromatographyMass spectrometryTandem mass spectrometry01 natural sciencesHigh-performance liquid chromatographyMass Spectrometry0404 agricultural biotechnologyCheeseCasein[SDV.IDA]Life Sciences [q-bio]/Food engineeringAnimalsAmino Acid SequenceChymosinChromatography High Pressure LiquidComputingMilieux_MISCELLANEOUSChromatographyChemistry PhysicalElutionChemistryGoats010401 analytical chemistryWater04 agricultural and veterinary sciencesGeneral Chemistry[SDV.IDA] Life Sciences [q-bio]/Food engineeringChromatography Ion Exchange040401 food science0104 chemical sciencesSolubilityChromatography GelGeneral Agricultural and Biological SciencesOligopeptides
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Setting the photoelectron clock through molecular alignment

2020

The interaction of strong laser fields with matter intrinsically provides a powerful tool for imaging transient dynamics with an extremely high spatiotemporal resolution. Here, we study strong-field ionisation of laser-aligned molecules, and show a full real-time picture of the photoelectron dynamics in the combined action of the laser field and the molecular interaction. We demonstrate that the molecule has a dramatic impact on the overall strong-field dynamics: it sets the clock for the emission of electrons with a given rescattering kinetic energy. This result represents a benchmark for the seminal statements of molecular-frame strong-field physics and has strong impact on the interpreta…

Chemical Physics (physics.chem-ph)Atomic Physics (physics.atom-ph)ScienceChemical physicsQQuantum physicsFOS: Physical sciencesSettore FIS/03 - Fisica Della MateriaArticlePhysics - Atomic PhysicsStrong field ionizationTDDFTPhysics - Chemical Physicslcsh:QAtomic and molecular physicsddc:500Physics - Atomic and Molecular Clusterslcsh:ScienceAtomic and Molecular Clusters (physics.atm-clus)Applied optics
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