Search results for "kalvot"

showing 10 items of 90 documents

Superconducting size effect in thin films under electric field: Mean-field self-consistent model

2019

We consider effects of an externally applied electrostatic field on superconductivity, self-consistently within a BCS mean field model, for a clean 3D metal thin film. The electrostatic change in superconducting condensation energy scales as $\mu^{-1}$ close to subband edges as a function of the Fermi energy $\mu$, and follows 3D scaling $\mu^{-2}$ away from them. We discuss nonlinearities beyond gate effect, and contrast results to recent experiments.

---Josephson effectsuprajohtavuusFOS: Physical sciences02 engineering and technology01 natural sciencessuprajohteetSuperconductivity (cond-mat.supr-con)superconducting phase transitionElectric fieldCondensed Matter::Superconductivity0103 physical sciencesThin film010306 general physicsScalingCondensed Matter::Quantum GasesSuperconductivityPhysicsCondensed matter physicsCondensed Matter - SuperconductivityFermi energy021001 nanoscience & nanotechnologyMean field theorythin filmsmesoscopicsohutkalvot0210 nano-technologyEnergy (signal processing)Physical Review B
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Negatively Charged Gangliosides Promote Membrane Association of Amphipathic Neurotransmitters

2018

Lipophilic neurotransmitters (NTs) such as dopamine are chemical messengers enabling neurotransmission by adhering onto the extracellular surface of the post-synaptic membrane in a synapse, followed by binding to their receptors. Previous studies have shown that the strength of the NT-membrane association is dependent on the lipid composition of the membrane. Negatively charged lipids such as phosphatidylserine, phosphatidylglycerol, and phosphatidic acid have been indicated to promote NT-membrane binding, however these anionic lipids reside almost exclusively in the intracellular leaflet of the post-synaptic membrane instead of the extracellular leaflet facing the synaptic cleft. Meanwhile…

0301 basic medicineMOLECULAR-DYNAMICS SIMULATIONSBIOMOLECULAR SYSTEMSkolesteroliasetyylikoliiniSynaptic TransmissionsolukalvotCell membranechemistry.chemical_compoundSCHIZOPHRENIAmolekyylidynamiikkamolecular dynamics (MD)neurotransmissionvälittäjäaineetChemistryLIPID-MEMBRANESGeneral NeurosciencePhosphatidylserineALZHEIMERS-DISEASEMembranemedicine.anatomical_structureHAMILTONIAN REPLICA EXCHANGElipids (amino acids peptides and proteins)dopamineIntracellularneurotransmittermonosialotetrahexosylganglioside (GM1)Synaptic cleftG(M1) GangliosideMolecular Dynamics SimulationNeurotransmission03 medical and health sciencesExtracellularmedicineAnimalsmonosialotetrahexosylgangliosidebinding free energyPhosphatidylglyceroldopamiiniBinding SitesCell Membranehistamiini3112 Neurosciencesta1182cholesterolBILAYERhistamineacetylcholinehermosolut030104 developmental biologyFORCE-FIELDBiophysicssynapsit
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Ultrafast structural changes within a photosynthetic reaction centre

2021

Nature <London> / Physical science 589, 310 - 314 (2021). doi:10.1038/s41586-020-3000-7

0301 basic medicinePhotosynthetic reaction centreChlorophyllModels MolecularklorofylliCytoplasmUbiquinonePhotosynthetic Reaction Center Complex ProteinsElectrons02 engineering and technologyPhotochemistrymedicine.disease_cause530yhteyttäminenbakteeritElectron Transport03 medical and health sciencesElectron transfermedicineMoleculeddc:530BacteriochlorophyllsbioenergetiikkaComputingMilieux_MISCELLANEOUSHyphomicrobiaceaeMultidisciplinaryBinding SitesCrystallography[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry Molecular Biology/Structural Biology [q-bio.BM]ChemistryBlastochloris viridisLaserskalvot (biologia)PheophytinsBiological membraneVitamin K 2021001 nanoscience & nanotechnologyAcceptor030104 developmental biologyPicosecondFemtosecondsense organsProtons0210 nano-technologyOxidation-Reductionröntgenkristallografia
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Assembly of Spinach Chloroplast ATP Synthase Rotor Ring Protein-Lipid Complex

2019

Rotor ATPases are large multisubunit membrane protein complexes found in all kingdoms of life. The membrane parts of these ATPases include a ring-like assembly, so-called c-ring, consisting of several subunits c, plugged by a patch of phospholipids. In this report, we use a nature-inspired approach to model the assembly of the spinach (Spinacia oleracea) c14 ring protein-lipid complex, where partially assembled oligomers are pulled toward each other using a biasing potential. The resulting assemblies contain 23 to 26 encapsulated plug lipids, general position of which corresponds well to experimental maps. However, best fit to experimental data is achieved with 15 to 17 lipids inside the c-…

0301 basic medicineSpinaciaATPaseProtein subunitlipiditBiochemistry Genetics and Molecular Biology (miscellaneous)Biochemistrysolukalvotprotein-lipid interactions03 medical and health sciences0302 clinical medicinecomplex assemblymembrane insertionMolecular Biosciencesmembrane proteinProtein–lipid interactionlcsh:QH301-705.5Molecular BiologyOriginal ResearchbiologyATP synthaseannular lipidsChemistrybiology.organism_classificationadenosiinitrifosfaatti030104 developmental biologyMembranelcsh:Biology (General)Membrane proteinProtein-lipid complex030220 oncology & carcinogenesisbiology.proteinBiophysicslipids (amino acids peptides and proteins)proteiinitFrontiers in Molecular Biosciences
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A Perspective : Active Role of Lipids in Neurotransmitter Dynamics

2019

AbstractSynaptic neurotransmission is generally considered as a function of membrane-embedded receptors and ion channels in response to the neurotransmitter (NT) release and binding. This perspective aims to widen the protein-centric view by including another vital component—the synaptic membrane—in the discussion. A vast set of atomistic molecular dynamics simulations and biophysical experiments indicate that NTs are divided into membrane-binding and membrane-nonbinding categories. The binary choice takes place at the water-membrane interface and follows closely the positioning of the receptors’ binding sites in relation to the membrane. Accordingly, when a lipophilic NT is on route to a m…

0301 basic medicinesynaptic neurotransmissionSynaptic cleftNeuroscience (miscellaneous)NeurotransmissionlipiditSynaptic vesicleSynaptic TransmissionSynaptic neurotransmissionArticlesolukalvotmembrane lipid composition (MLC)03 medical and health sciencesCellular and Molecular Neurosciencechemistry.chemical_compound0302 clinical medicineSynaptic receptormembrane-based sortingAnimalsHumansmolekyylidynamiikkaNeurotransmittermolecular dynamics (MD)Binding siteNeurotransmitterReceptorvälittäjäaineetIon channelNeurotransmitter AgentsmolekyylineurologiaMembrane lipid composition (MLC)Molecular dynamics (MD)Lipid MetabolismLipids030104 developmental biologyNeurologychemistrySynapsesBiophysicsSynaptic VesiclessynapsitMembrane-based sorting030217 neurology & neurosurgeryFunction (biology)neurotransmittersynaptic receptor
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Lämpösähköisen materiaalin lämmönjohtavuuden määrittäminen matalissa lämpötiloissa käyttäen 3ω-menetelmää

2014

Työssä tutkittiin mittausmenetelmää lämmönjohtavuuden määrittämiseen mata- lissa lämpötiloissa. Mittaukset perustuivat 3ω menetelmään, joka on alunperin ohut- kalvoille kehitetty menetelmä lämmönjohtavuuden mittaukseen. Menetelmässä läm- mitinlangan läpi kulkeva vaihtovirta synnyttää kolminkertaisella taajudella olevan jännitteen, jonka avulla saadaan tietoa kappaleen termisistä ominaisuuksista. Mit- tauksissa kultainen lämmitinlanka höyrystettiin Kapton kalvon päälle ja tämän päälle hyvin ohut alumiinioksidikerros. Mittaukset suoritettiin pulssituubijäähdyttimeen ra- kennetussa näytteenpitimessä. Laitteiston toiminta varmistettiin huoneenlämpötilas- sa borosilikaatti- ja Kapton näytteillä.…

3ω menetelmämittatekniikan keskuslämmön johtuminenlämpösähköinen ilmiö3-omegalämmön siirtyminenLämmönjohtavuuden mittaaminenohutkalvot
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Structure and dynamics of CaO films: A computational study of an effect of external static electric field

2017

Oxide films play a significant role in a wide range of industrial fields, mostly due to the thickness-dependent variation of their properties. Recently, it has been proposed based on the experimental study that carrier transport in CaO films proceeds via strong phonon excitations with a variable signal depending on the film thickness. In this paper, we report a detailed investigation in the frame of the density functional theory of structural and electronic properties of freestanding and Mo(100)-supported CaO films, as well as phonons therein, as functions of the film thickness and intensity of the external static electric field. Our calculations demonstrate that phonon frequencies negligib…

Band gapPhononphononsOxide02 engineering and technologyexternal electric field01 natural scienceschemistry.chemical_compoundCondensed Matter::Materials ScienceCaO filmsElectric fieldCondensed Matter::Superconductivity0103 physical sciences010306 general physicsta116fononitPhysicsRange (particle radiation)ta114Condensed matter physicsElectronic Optical and Magnetic Materialsähköiset ominaisuudetCondensed Matter Physics021001 nanoscience & nanotechnologyElectron transport chainchemistrysähkökentätelectronic propertiesDensity functional theoryohutkalvot0210 nano-technologyIntensity (heat transfer)
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Ultrastiff graphene

2021

Graphene has exceptionally high in-plane strength, which makes it ideal for various nanomechanical applications. At the same time, its exceptionally low out-of-plane stiffness makes it also flimsy and hard to handle, rendering out-of-plane structures unstable and difficult to fabricate. Therefore, from an application point of view, a method to stiffen graphene would be highly beneficial. Here we demonstrate that graphene can be significantly stiffened by using a laser writing technique called optical forging. We fabricate suspended graphene membranes and use optical forging to create stable corrugations. Nanoindentation experiments show that the corrugations increase graphene bending stiffn…

ChemistrynanorakenteetTA401-492grafeeniohutkalvotMaterials of engineering and construction. Mechanics of materialsQD1-999
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Control of Molecular Orbital Ordering Using a van der Waals Monolayer Ferroelectric

2022

Two-dimensional (2D) ferroelectric materials provide a promising platform for the electrical control of quantum states. In particular, due to their 2D nature, they are suitable for influencing the quantum states of deposited molecules via the proximity effect. Here, we report electrically controllable molecular states in phthalocyanine molecules adsorbed on monolayer ferroelectric material SnTe. In particular, we demonstrate that the strain and ferroelectric order in SnTe creates a transition between two distinct orbital orders in the adsorbed phthalocyanine molecules. By controlling the polarization of the ferroelectric domain using scanning tunneling microscopy (STM), we have successfully…

Condensed Matter - Materials ScienceCondensed Matter - Mesoscale and Nanoscale PhysicssähkökentätMesoscale and Nanoscale Physics (cond-mat.mes-hall)Materials Science (cond-mat.mtrl-sci)FOS: Physical sciencesmolekyylitohutkalvotmolekyylielektroniikka
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Something old, something new : exploring membrane-containing bacteriophages

2016

Cystoviridaesaperonitrakenneviruksetvirus assemblymembrane-containing virusbakteriofagitfluoresenssimikroskopiassDNA phagevirologiaperimäkalvotchaperonin complexproteiinitbacteriophage PRD1fluorescent fusion proteinkapsidi
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