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showing 10 items of 31271 documents

Lichen communities on Populus   tremula are affected by the density of Picea   abies

2021

Questions Aspen (Populus tremula) is declining in the old‐growth forests of boreal Fennoscandia. This threatens the numerous taxa that are dependent on old aspens, including many epiphytic lichens. Potential methods to aid epiphytic lichens on aspen are centered around treatments which affect the density of Norway spruce (Picea abies). In this study, we investigated how epiphytic lichen communities on aspen are affected by the variation of spruce density in the immediate vicinity of the focal aspen. Location Southern boreal forests in Finland. Methods We recorded the occurrence of lichens from 120 aspens in 12 semi‐natural forest sites. We used spruce basal area as the measure for spruce de…

0106 biological scienceshaapaBiodiversityEcological succession01 natural sciencestiheysvanhat metsätboreal forestsLichenFinlandbiodiversitysienitiededensitygeography.geographical_feature_categoryEcologybiologyjäkälätEcologyTaigaesiintyminenOld-growth forestekologiasuccessionold growth forestsboreaalinen vyöhykeEuropean aspenNorway spruceboreal zoneold-growth forestsvuorovaikutuslichen communitiesEcology (disciplines)epiphytic lichenscyanolichensinteractionManagement Monitoring Policy and Lawlichen010603 evolutionary biologyred‐listed speciessuojelualueetoccurenceSouthern FinlandPopulus tremulaNature and Landscape ConservationgeographyCommunityPicea abiesPicea abies15. Life on landbiology.organism_classificationbiodiversiteettimycologyprotected areasmetsäkuusired-listed speciescommunity ecology010606 plant biology & botanyApplied Vegetation Science
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Fishery-dependent and -independent data lead to consistent estimations of essential habitats

2016

AbstractSpecies mapping is an essential tool for conservation programmes as it provides clear pictures of the distribution of marine resources. However, in fishery ecology, the amount of objective scientific information is limited and data may not always be directly comparable. Information about the distribution of marine species can be derived from two main sources: fishery-independent data (scientific surveys at sea) and fishery-dependent data (collection and sampling by observers in commercial vessels). The aim of this paper is to compare whether these two different sources produce similar, complementary, or different results. We compare them in the specific context of identifying the Es…

0106 biological scienceshttp://aims.fao.org/aos/agrovoc/c_28840Biodiversité et Ecologiehabitatmodélisation spatialehttp://aims.fao.org/aos/agrovoc/c_38371OceanographyGaleus melastomus01 natural sciencesRessource halieutiquehttp://aims.fao.org/aos/agrovoc/c_38127Scyliorhinus caniculamodèle hiérarchiqueSpatial statisticsEcologymodèle de distributionSampling (statistics)Contrast (statistics)Cross-validationModélisation et simulationGeographyHabitatGestion des pêchesModeling and Simulationhttp://aims.fao.org/aos/agrovoc/c_10566http://aims.fao.org/aos/agrovoc/c_3456http://aims.fao.org/aos/agrovoc/c_38117survey designMarine conservationSpecies Distribution ModelsEcology (disciplines)Bayesian probabilityEtmopterus spinaxenquête statistiqueDonnée sur les pêchesmodèle spatiotemporelSede Central IEOContext (language use)Aquatic ScienceDistribution des populationsBayesian hierarchical models010603 evolutionary biologyhttp://aims.fao.org/aos/agrovoc/c_24026elasmobranchsBiodiversity and Ecologyélasmobrancheétude comparativeBayesian hierarchical models;Cross-validation;Species Distribution Models;Spatial statistics;INLA;elasmobranchs ; survey designINLA14. Life underwaterspecies distribution modelsEcology Evolution Behavior and Systematicshttp://aims.fao.org/aos/agrovoc/c_6113collecte des donnéesÉcologie marinehttp://aims.fao.org/aos/agrovoc/c_29788http://aims.fao.org/aos/agrovoc/c_4609010604 marine biology & hydrobiologyGestion et conservation des pêchescross validation[INFO.INFO-MO]Computer Science [cs]/Modeling and Simulationmodèle bayésienFisheryM01 - Pêche et aquaculture - Considérations généraleshttp://aims.fao.org/aos/agrovoc/c_2a75d27eThéorie bayésienneM40 - Écologie aquatiqueSpatial ecologyhttp://aims.fao.org/aos/agrovoc/c_2942[SDE.BE]Environmental Sciences/Biodiversity and Ecologyvalidation croiséeElasmobranchii
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“Porţile de Fier/Iron Gates” Gorges Area (Danube) Fish Fauna

2014

AbstractAn important fisheries sector of the Danube, the “Iron Gates” area, was studied by famous naturalists along the history like Marsigli, Haeckel, Kner, Antipa and Bănărescu. After more than half a century after the last main publication in this area, the “Iron Gates” Danube sector suffered significant human impact, and an assessment of the fish fauna was needed. The paper summarizes the trend of fish species along the XIX to XXIst centuries, and reveals the appearance of new species. The study includes data from about 65 fish species, belonging to: Acipenseridae, Polyodontidae, Clupeidae, Salmonidae, Esocidae, Cyprinidae, Cobitidae, Siluridae, Ictaluridae, Anguillidae, Lotidae, Gaster…

0106 biological scienceshuman impactEcology010604 marine biology & hydrobiologyFaunaEcology (disciplines)010501 environmental scienceshabitat changesfish fauna01 natural sciencesFisheryGeography13. Climate actiondanubeFish <Actinopterygii>14. Life underwaterQH540-549.50105 earth and related environmental sciencesTransylvanian Review of Systematical and Ecological Research
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Thymallus thymallus (Linnaeus, 1758), Ecological Status in Maramureş Mountains Nature Park (Romania)

2016

Abstract Thymallus thymallus is considered a species of significant protective importance within the Vişeu Watershed. The state of habitats characteristically inhabited by Thymallus thymallus within the Maramureş Mountains Nature Park is balanced between reduced (one third of the lotic sectors where the species was identified), average (one third) and good (one third). The excellent conservation status is currently missing for populations of this fish in the Vișeu Basin. Human impact types identified as contributing towards the decreasing state of Thymallus thymallus habitats and therefore populations in the studied area in comparison with its natural potential are: poaching, minor riverbed…

0106 biological scienceshuman impactEcologybiologyEcologyassessmentEcology (disciplines)030206 dentistrybiology.organism_classification010603 evolutionary biology01 natural sciencesThymallusgraylingFishery03 medical and health sciences0302 clinical medicineGeographyNature parkhabitatsQH540-549.5Transylvanian Review of Systematical and Ecological Research
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Parasite transmission in aquatic ecosystems under temperature change: effects of host activity and elimination of parasite larvae by filter‐feeders

2020

A moderate raise in temperature was suggested to enhance the impact of parasites on aquatic ecosystems. Under higher temperatures, poikilothermic animals (e.g. fish) increase their activity, which can result in a more frequent encounter with parasites. However, temperature increase may also trigger processes counteracting an increased risk of parasitic infections. Thus, the removal of free‐living stages of parasites by filter‐feeding organisms can increase with temperature and potentially mitigate disease risk in ecosystems under climate change. We aimed to study whether an increased infection transmission under higher temperatures can be compensated by the increased removal of parasitic la…

0106 biological sciencesinfection intensitylajityypillinen käyttäytyminenZoologyDiplostomum pseudospathaceumisäntälajitBiologyglobal warming010603 evolutionary biology01 natural sciencesFreshwater ecosystemfish behaviorkirjolohiloisetfreshwater musselsilmastoParasite hostingEcosystemEcology Evolution Behavior and SystematicskalatLarvaHost (biology)010604 marine biology & hydrobiologyAquatic ecosystemfungivesiekosysteemitMusselilmastonmuutoksetsimpukatrainbow trouthost-parasite interactionsPoikilothermpredation on cercariaemakea vesilämpeneminenOikos
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Network analysis by simulated annealing of taxa and islands of Macaronesia (North Atlantic Ocean)

2018

With the aim of explaining the role that taxa and island features have in biogeographical patterns, we processed presence–absence matrices of all the Macaronesian native species of ten different taxa (arthropods, birds, bryophytes, fungi, lichens, mammals, mollusks, pteridophytes, reptiles and spermatophytes) through simulated annealing analysis. Distribution patterns among the archipelagos were pinpointed, along with the different biogeographic roles played by islands and species groups. All the networks analysed resulted to be significantly modular and the structure of biogeographic modules reflects known past connections among the archipelagos and the current drivers of species distribut…

0106 biological sciencesinsular networksisland biogeographyEcologyInsular biogeography010604 marine biology & hydrobiologyEcology (disciplines)insular network010603 evolutionary biology01 natural sciencesOceanographyGeographyTaxonsistemas insularesbiogeografía insularSimulated annealingMacaronesiaEcology Evolution Behavior and Systematics
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Integrative descriptions of two new Macrobiotus species (Tardigrada, Eutardigrada, Macrobiotidae) from Mississippi (USA) and Crete (Greece)

2021

In this paper, we describe two new Macrobiotus species from Mississippi (USA) and Crete (Greece) by means of integrative taxonomy. Detailed morphological data from light and scanning electron microscopy, as well as molecular data (sequences of four genetic markers: 18S rRNA, 28S rRNA, ITS-2 and COI), are provided in support of the descriptions of the new species. Macrobiotus annewintersaesp. nov. from Mississippi belongs to the Macrobiotus persimilis complex (Macrobiotus clade B) and exhibits a unique egg processes morphology, similar only to Macrobiotus anemone Meyer, Domingue &amp;amp; Hinton, 2014, but mainly differs from that species by the presence of eyes, granulation on all legs, den…

0106 biological scienceskarhukaisetQH301-705.5species delineationMacrobiotidae010607 zoologyTardigradaZoologyBiology010603 evolutionary biology01 natural sciencesMacrobiotusTardigradaAnimaliaBiology (General)Ecology Evolution Behavior and Systematicsintegrative taxonomymolecular phylogenyfylogeniasystematiikka (biologia)water bearsfylogenetiikkaMacrobiotus persimilis complexegg ornamentationEutardigradaParachelalajiutuminen
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Chlorophyll a fluorescence illuminates a path connecting plant molecular biology to Earth-system science

2021

Remote sensing methods enable detection of solar-induced chlorophyll a fluorescence. However, to unleash the full potential of this signal, intensive cross-disciplinary work is required to harmonize biophysical and ecophysiological studies. For decades, the dynamic nature of chlorophyll a fluorescence (ChlaF) has provided insight into the biophysics and ecophysiology of the light reactions of photosynthesis from the subcellular to leaf scales. Recent advances in remote sensing methods enable detection of ChlaF induced by sunlight across a range of larger scales, from using instruments mounted on towers above plant canopies to Earth-orbiting satellites. This signal is referred to as solar-in…

0106 biological sciencesklorofylliChlorophyll a010504 meteorology & atmospheric sciencesEarth scienceEcology (disciplines)Plant Scienceekofysiologia01 natural sciencesFluorescencebiofysiikkayhteyttäminenchemistry.chemical_compoundLEAFLEAVESWATERPhotosynthesisCO2 ASSIMILATIONSCOTS PINE[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environmentMolecular Biology0105 earth and related environmental sciences[SDU.OCEAN]Sciences of the Universe [physics]/Ocean AtmosphereChlorophyll ASUN-INDUCED FLUORESCENCEfluoresenssiBiogeochemistrykasvillisuus15. Life on land11831 Plant biologyReflectivityREFLECTANCEPlant LeavesEarth system scienceddc:580RESOLUTIONchemistryPHOTOSYSTEM-I13. Climate actionRemote Sensing TechnologyEarth SciencessatelliittikuvausEnvironmental sciencekaukokartoitus010606 plant biology & botanyNature Plants
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Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation

2021

According to the most recent taxonomical revision, the deep-sea dogfish genus Deania encompasses four species. Three of them, D. calcea, D. profundorum, and D. hystricosa, occur in the North Atlantic. Whilst D. profundorum can be identified by the presence of a subcaudal keel, the other two species are not easily visually distinguished. Uncertainties over identification raises concerns over stock units and whether management plans are adequate. In this study we compared onboard visual identification of Deania specimens, with morphological inspection of skin denticles under stereo microscope and with independent molecular taxonomical assignment using two molecular markers. Particular emphasi…

0106 biological scienceslcsh:QH1-199.5Lineage (evolution)deep-sea dogfishdeep-sea sharksOcean Engineeringlcsh:General. Including nature conservation geographical distributionAquatic SciencephylogenyOceanography010603 evolutionary biology01 natural sciencesCoalescent theoryskin denticles03 medical and health sciencesGenusVicariance14. Life underwaterlcsh:ScienceAtlantic Ocean030304 developmental biologyWater Science and Technology0303 health sciencesGlobal and Planetary Changebiologyfishery by-catchVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497biology.organism_classificationCentrophoridaeEvolutionary biologyMolecular phylogeneticslcsh:QTaxonomy (biology)DeaniaFrontiers in Marine Science
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OMICfpp: a fuzzy approach for paired RNA-Seq counts

2019

© The Author(s) 2019.

0106 biological scienceslcsh:QH426-470Pipeline (computing)lcsh:BiotechnologyRNA-SeqBinomial testSample (statistics)Biologyoncología médicaMedical Oncology01 natural sciencesFuzzy logicSet (abstract data type)03 medical and health sciencesUser-Computer InterfaceSoftwarelcsh:TP248.13-248.65GeneticsHumansCàncer030304 developmental biologyOrdered weight average0303 health sciencesbusiness.industrySequence Analysis RNAMethodology ArticleHigh-Throughput Nucleotide SequencingPattern recognitionColorectal cancerlcsh:Genetics3201.01 OncologíatranscriptomaRandomization distributionRNAArtificial intelligenceDNA microarraybusinessColorectal NeoplasmsTranscriptome010606 plant biology & botanyBiotechnology
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