Search results for "lineage"
showing 10 items of 331 documents
Paleogenetic and morphometric analysis of a Mesolithic individual from Grotta d'Oriente: An oldest genetic legacy for the first modern humans in Sici…
2020
Abstract Grotta d’Oriente, a coastal cave located on the island of Favignana (Sicily, Italy) is a key site for the study of the early human colonization of Sicily. Inside the cave, during different field excavations, three burials attributable to the Late Upper Palaeolithic and Mesolithic were found. The Mesolithic Oriente B individual, directly dated at 9,377 ± 25 uncal BP, was previously assigned to HV1 haplogroup using a traditional approach. However, it is well known that PCR based methods are prone to erroneous haplotype or haplogroup determination. In order to redefine the mitochondrial lineage of this Mesolithic hunter-gatherer and explore its phylogenetic position, we target-enriche…
Évolution rétrograde de Neospathodus au cours de la crise Permo - Triasique
2016
The Permian - Triassic evolution of platform conodonts (Gondolellidae) consists mainly in developing the carina and the platform. During the sublethal environmental stress conditions subsequent to the Permian - Triassic extinction, the Wuchiapingian - Griesbachian Clarkina lineage is replaced by the primitive looking platform-lacking Dienerian - Aegean Neospathodus kummeli - Kashmirella timorensis lineage. Moreover, above Jinogondolella denticulata, end of the Capitanian Jinogondolella lineage, “Neospathodus” arcucristatus, an atavistic blade-like homeomorph that lacks a platform, underlies Protoclarkina crofti, of the base of the anagenetic Clarkina lineage. These primitive-looking forms a…
Pseudoshasticrioceras bersaci nov. sp. (Ammonoidea, Gassendiceratinae), and new ammonite biohorizon for the Upper Barremian of southeastern France
2009
International audience; Research in the Feraudianus Subzone of the Sartousiana Zone of the Barremian stage led to the discovery of a new species of Pseudoshasticrioceras: P. bersaci nov. sp. Its study provides evidence concerning the developments of the latest Gassendiceratinae BERT et alii, 2006, and the relationship between the genus Pseudoshasticrioceras DELANOY, 1998, and Gassendiceras BERT et alii, 2006. In particular, this new species is derived from Pseudoshasticrioceras magnini (DELANOY, 1992) by a minor revision in the processes of ontogenesis (retardation of ornamentation - neoteny). However, the evolution towards Pseudoshasticrioceras autrani DELANOY, 1998, implies a "failure" in…
Assessing metabolic constraints on the maximum body size of actinopterygians: locomotion energetics of Leedsichthys problematicus (Actinopterygii, Pa…
2018
Maximum sizes attained by living actinopterygians are much smaller than those reached by chondrichthyans. Several factors, including the high metabolic requirements of bony fishes, have been proposed as possible body‐size constraints but no empirical approaches exist. Remarkably, fossil evidence has rarely been considered despite some extinct actinopterygians reaching sizes comparable to those of the largest living sharks. Here, we have assessed the locomotion energetics of Leedsichthys problematicus, an extinct gigantic suspension‐feeder and the largest actinopterygian ever known, shedding light on the metabolic limits of body size in actinopterygians and the possible underlying factors th…
Linking species habitat and past palaeoclimatic events to evolution of the teleost innate immune system
2017
Host-intrinsic factors as well as environmental changes are known to be strong evolutionary drivers defining the genetic foundation of immunity. Using a novel set of teleost genomes and a time-calibrated phylogeny, we here investigate the family of Toll-like receptor ( TLR ) genes and address the underlying evolutionary processes shaping the diversity of the first-line defence. Our findings reveal remarkable flexibility within the evolutionary design of teleost innate immunity characterized by prominent TLR gene losses and expansions. In the order of Gadiformes, expansions correlate with the loss of major histocompatibility complex class II ( MHCII ) and diversifying selection analyses sup…
Dual colonization of the Palaearctic from different regions in the Afrotropics bySenecio
2016
Aim Investigation of the geographical origin of Senecio and the colonization of the Palaearctic including the relationship of life-history strategy and elevational distribution in the source area and the colonized area. Location Worldwide with a focus on the Afrotropic and the Palaearctic. Methods Sampling focused on adding species from the Afrotropic to existing datasets of Senecio. Two nuclear markers and three chloroplast markers were amplified and sequenced. Maximum likelihood and Bayesian inference were used to infer phylogeny, divergence times, biogeographical history and life-history strategy evolution. Results Senecio originated most likely during the Mid to Late Miocene in western …
Successive Losses of Central Immune Genes Characterize the Gadiformes' Alternate Immunity.
2016
Great genetic variability among teleost immunomes, with gene losses and expansions of central adaptive and innate components, has been discovered through genome sequencing over the last few years. Here, we demonstrate that the innate Myxovirus resistance gene (Mx) is lost from the ancestor of Gadiformes and the closely related Stylephorus chordatus, thus predating the loss of Major Histocompatibility Complex class II (MHCII) in Gadiformes. Although the functional implication of Mx loss is still unknown, we demonstrate that this loss is one of several ancient events appearing in successive order throughout the evolution of teleost immunity. In particular, we find that the loss of Toll-like r…
Selective sweep ofWolbachiaand parthenogenetic host genomes - the example of the weevilEusomus ovulum
2016
Most parthenogenetic weevil species are postulated to have originated via hybridization, but Wolbachia has also been speculated to play a role via the induction of parthenogenesis. Here, we examine the molecular diversity of Wolbachia and parthenogenetic host genomes. The host species studied here, Eusomus ovulum, is known to be exclusively parthenogenetic and triploid. The E. ovulum populations that we examined had a low genetic diversity of mitochondrial (cytochrome oxidase I gene) and nuclear markers (internal transcribed spacer 2 and elongation factor 1-α gene), and they all were infected by only single bacteria strains (genotyped for five genes according to the multilocus sequence typi…
Jumping on the Edge—First Evidence for a 2 × 6-meric Hemocyanin in Springtails
2019
Hemocyanins are respiratory dioxygen carrier proteins found in many arthropods including ancient terrestrial species such as spiders and scorpions as well as marine horseshoe crabs. As hemocyanins are highly conserved in this lineage, it is possible to observe an evolutionary descent through its subunits and their overall structure. Unfortunately, little is known about the structure and function of hexapod hemocyanins. Using recent springtail taxa (Collembola) as models for basal hexapods, and the help of electron microscopy, light scattering, SDS PAGE, and Western blot, we could demonstrate for the first time the presence of 2 × 6-meric hemocyanins in the hemolymph of hexapods. The quatern…
Multilocus and morphological analysis of south‐eastern Iberian Wall lizards (Squamata,Podarcis)
2020
The phylogenetic relationships among the wall lizards of the Podarcis hispanicus complex that inhabit the south-east (SE) of the Iberian Peninsula and other lineages of the complex remain unclear. In this study, four mitochondrial and two nuclear markers were used to study genetic relationships within this complex. The phylogenetic analyses based on mtDNA gene trees constructed with ML and BI, and a species tree using *BEAST support three divergent clades in this region: the Valencia, Galera and Albacete/Murcia lineages. These three lineages were also corroborated in species delimitation analyses based on mtDNA using bPTP, mPTP, GMYC, ABGD and BAPS. Bayesian inference species delimitation m…