Search results for "lipidi"

showing 10 items of 65 documents

Virus found in a boreal lake links ssDNA and dsDNA viruses.

2017

Viruses have impacted the biosphere in numerous ways since the dawn of life. However, the evolution, genetic, structural, and taxonomic diversity of viruses remain poorly understood, in part because sparse sampling of the virosphere has concentrated mostly on exploring the abundance and diversity of dsDNA viruses. Furthermore, viral genomes are highly diverse, and using only the current sequence-based methods for classifying viruses and studying their phylogeny is complicated. Here we describe a virus, FLiP (Flavobacterium-infecting, lipid-containing phage), with a circular ssDNA genome and an internal lipid membrane enclosed in the icosahedral capsid. The 9,174-nt-long genome showed limite…

0301 basic medicineBACTERIALviruksetProtein ConformationviruseslipiditGenomechemistry.chemical_compoundProtein structureBINDINGVIRAL UNIVERSE1183 Plant biology microbiology virologyGeneticsMultidisciplinaryCRYOELECTRON MICROSCOPYBiological Sciencesboreaalinen vyöhykeCapsidViral evolutionCAPSID PROTEINLineage (genetic)030106 microbiologyGENOMESDNA Single-Strandedcryo-electron microscopyGenome ViralBiologyPROTEIN STRUCTURESjärvetFlavobacteriumVirusbakteriofagitlipids03 medical and health sciencesCapsidPhylogeneticsBacteriophage PRD1structuregenometa1182DNA VirusesDNAEVOLUTIONLakes030104 developmental biologychemistryperimäCapsid ProteinsCOMMUNITIESDNAProceedings of the National Academy of Sciences of the United States of America
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Assembly of Spinach Chloroplast ATP Synthase Rotor Ring Protein-Lipid Complex

2019

Rotor ATPases are large multisubunit membrane protein complexes found in all kingdoms of life. The membrane parts of these ATPases include a ring-like assembly, so-called c-ring, consisting of several subunits c, plugged by a patch of phospholipids. In this report, we use a nature-inspired approach to model the assembly of the spinach (Spinacia oleracea) c14 ring protein-lipid complex, where partially assembled oligomers are pulled toward each other using a biasing potential. The resulting assemblies contain 23 to 26 encapsulated plug lipids, general position of which corresponds well to experimental maps. However, best fit to experimental data is achieved with 15 to 17 lipids inside the c-…

0301 basic medicineSpinaciaATPaseProtein subunitlipiditBiochemistry Genetics and Molecular Biology (miscellaneous)Biochemistrysolukalvotprotein-lipid interactions03 medical and health sciences0302 clinical medicinecomplex assemblymembrane insertionMolecular Biosciencesmembrane proteinProtein–lipid interactionlcsh:QH301-705.5Molecular BiologyOriginal ResearchbiologyATP synthaseannular lipidsChemistrybiology.organism_classificationadenosiinitrifosfaatti030104 developmental biologyMembranelcsh:Biology (General)Membrane proteinProtein-lipid complex030220 oncology & carcinogenesisbiology.proteinBiophysicslipids (amino acids peptides and proteins)proteiinitFrontiers in Molecular Biosciences
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A Perspective : Active Role of Lipids in Neurotransmitter Dynamics

2019

AbstractSynaptic neurotransmission is generally considered as a function of membrane-embedded receptors and ion channels in response to the neurotransmitter (NT) release and binding. This perspective aims to widen the protein-centric view by including another vital component—the synaptic membrane—in the discussion. A vast set of atomistic molecular dynamics simulations and biophysical experiments indicate that NTs are divided into membrane-binding and membrane-nonbinding categories. The binary choice takes place at the water-membrane interface and follows closely the positioning of the receptors’ binding sites in relation to the membrane. Accordingly, when a lipophilic NT is on route to a m…

0301 basic medicinesynaptic neurotransmissionSynaptic cleftNeuroscience (miscellaneous)NeurotransmissionlipiditSynaptic vesicleSynaptic TransmissionSynaptic neurotransmissionArticlesolukalvotmembrane lipid composition (MLC)03 medical and health sciencesCellular and Molecular Neurosciencechemistry.chemical_compound0302 clinical medicineSynaptic receptormembrane-based sortingAnimalsHumansmolekyylidynamiikkaNeurotransmittermolecular dynamics (MD)Binding siteNeurotransmitterReceptorvälittäjäaineetIon channelNeurotransmitter AgentsmolekyylineurologiaMembrane lipid composition (MLC)Molecular dynamics (MD)Lipid MetabolismLipids030104 developmental biologyNeurologychemistrySynapsesBiophysicsSynaptic VesiclessynapsitMembrane-based sorting030217 neurology & neurosurgeryFunction (biology)neurotransmittersynaptic receptor
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Challenges and Opportunities on Lipid Metabolism Disorders Diagnosis and Therapy: Novel Insights and Future Perspective

2021

Dyslipidemia has been globally recognized, for almost seven decades, as one of the most important risk factors for the development and complications of atherosclerotic cardiovascular disease (ASCVD) [...]

2019-20 coronavirus outbreakFuture perspectiveLipid Metabolism DisorderCoronavirus disease 2019 (COVID-19)Atherosclerotic cardiovascular diseasebusiness.industryEndocrinology Diabetes and MetabolismSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)medicine.diseaseBioinformaticsBiochemistryMicrobiologyQR1-502Editorialn/amedicinebusinessMolecular BiologyDyslipidemialipidi colesterolMetabolites
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Molecular basis of the effects of argan oil on mitochondrial and peroxisomal metabolism of the fatty acids and inflammation

2012

The objective of this thesis work was to explore the molecular basis of Argan Oil (AO) effects on the mitochondrial and peroxisomal lipid metabolism and to elucidate its anti-inflammatory potential. We thus showed, initially, that the artisanal method preparation preserved the antioxidant properties of AO preventing the oxidation of the ferulic acid, by contrast to AO of commercial origin. Then, the treatment by the AO or lipopolysaccharides (LPS) of human fibroblasts, the cellular model of pseudo-neonatal adrenoleukodystrophy (P-NALD), revealed for the AO that peroxisomes proliferation is independent from the activation of the nuclear receptor PPARα and the co-activator PGC-1α. On the othe…

Acide féruliqueLPSACADsPGC-1αArganPPARαTNFα[ SDV.SA ] Life Sciences [q-bio]/Agricultural sciencesInflammation[SDV.SA] Life Sciences [q-bio]/Agricultural sciencesIL-6GluconeogenesisP-NALDFerulic acidMitochondrieLipid MetabolismFatty acidMétabolisme lipidiqueAntioxydantMitochondriaAcide grasLiverΒ-oxidationNéoglucogenèseAntioxidantACOX1PeroxysomeFoieIL10Β-oxydation
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Plasma lipid profile associates with the improvement of psychological well-being in individuals with perceived stress symptoms

2020

Psychological stress is a suggested risk factor of metabolic disorders, but molecular mediators are not well understood. We investigated the association between the metabolic profiles of fasting plasma and the improvement of psychological well-being using non-targeted liquid chromatography-mass spectrometry (LC-MS) platform. The metabolic profiles of volunteers participating in the face-to-face intervention group (n = 60) in a randomised lifestyle intervention were compared to ones of controls (n = 64) between baseline and 36-week follow-up. Despite modest differences in metabolic profile between groups, we found associations between phosphatidylcholines (PCs) and several parameters indicat…

AdultMalePSYCHOSOCIAL STRESSPlasmalogensDIET QUALITYlcsh:MedicinebiomarkkeritlipiditPredictive markersArticleDiagnostic Self Evaluationhenkinen hyvinvointiaineenvaihduntahäiriötMetabolomicsHumansHealthy Lifestylelcsh:ScienceaineenvaihduntaAdiposityHEART-RATE-VARIABILITYOVERWEIGHTIDENTIFICATIONlcsh:Rpredictive markersstressiMASS-SPECTROMETRYMiddle AgedRECOVERYmetabolomicsPHYSICAL-ACTIVITYMetabolomePhosphatidylcholinesSUBJECTIVE STRESSFemalelcsh:Q3111 BiomedicineBiomarkersStress PsychologicalBEHAVIORScientific Reports
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Cation binding resorcinarene bis-crowns: the effect of lower rim alkyl chain length on crystal packing and solid lipid nanoparticles

2012

A group of seven resorcinarene bis-crown ethers (CNBC5) with two polyether bridges at the upper rim and either propyl, butyl, pentyl, heptyl, nonyl, decyl or undecyl groups at the lower rim were synthesized and their binding properties with Cs+ were investigated by NMR titration. The bis-crowns form 1:2 complexes with Cs+ with binding constants of logK 4–5. Crystal structures of bis-crowns and their Cs+ and K+ complexes were studied and different packing motifs were found depending on the alkyl chain length. Short ethyl, propyl and butyl alkyl chains gave a layer or pillar packing where the polar and non-polar regions cannot be distinguished, whereas longer pentyl and decyl chains formed bi…

Cation bindingkaliumStereochemistryydinmagneettinen resonanssiCyclohexane conformationsolid lipid nanoparticleamphiphileCrystal structureCatalysisCrystalcesiumAmphiphilesupramolekyylikemiaMaterials Chemistrykiinteä lipidipartikkelisupramolekulaarinen kemiaMoleculemacrocyclic compoundta116Alkylkaliksareeniitsejärjestäytyminenchemistry.chemical_classificationresorcinareneChemistryGeneral Chemistrycaesiumself-assemblyResorcinarenekompleksiCrystallographynuclear magnetic resonanceamfifiilimakrosyklinen yhdistecalixarenecomplexröntgenkristallografiaresorsinareeni
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Plasmonic Resonant Nanoantennas Induce Changes in the Shape and the Intensity of Infrared Spectra of Phospholipids.

2021

Surface enhanced infrared absorption spectroscopic studies (SEIRAS) as a technique to study biological molecules in extremely low concentrations is greatly evolving. In order to use the technique for identification of the structure and interactions of such biological molecules, it is necessary to identify the effects of the plasmonic electric-field enhancement on the spectral signature. In this study the spectral properties of 1,2-Dipalmitoyl-sn-glycero-3 phosphothioethanol (DPPTE) phospholipid immobilized on gold nanoantennas, specifically designed to enhance the vibrational fingerprints of lipid molecules were studied. An AFM study demonstrates an organization of the DPPTE phospholipid in…

Chemical PhenomenaSpectrophotometry InfraredLipid BilayersPharmaceutical ScienceMetal NanoparticleslipiditMicroscopy Atomic ForcebiomolekyylitkultaArticleAnalytical ChemistryQD241-441nanorakenteetDrug Discoveryddc:530Physical and Theoretical ChemistryDPPTEenhancementPhospholipidsSEIRASnanoantennas; DPPTE; bilayers; SEIRAS; enhancement; AFMPhysicsOrganic ChemistryTemperatureinfrapunaspektroskopiaSurface Plasmon ResonanceNanostructuresnanoantennasChemistry (miscellaneous)Molecular MedicineGoldAFMbilayersMolecules (Basel, Switzerland)
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Interacting effects of simulated eutrophication, temperature increase, and microplastic exposure on Daphnia

2020

The effects of multiple stressors are difficult to separate in field studies, and their interactions may be hard to predict if studied in isolation. We studied the effects of decreasing food quality (increase in cyanobacteria from 5 to 95% simulating eutrophication), temperature increase (by 3 °C), and microplastic exposure (1% of the diet) on survival, size, reproduction, and fatty acid composition of the model freshwater cladoceran Daphnia magna. We found that food quality was the major driver of Daphnia responses. When the amount of cyanobacteria increased from 5 to 95% of the diet, there was a drastic decrease in Daphnia survival (from 81 ± 15% to 24 ± 21%), juvenile size (from 1.8 ± 0.…

CyanobacteriaMicroplasticsDaphnia magnarasvahapotlipidit010501 environmental sciences01 natural sciencesBiochemistryDaphniamikromuovit0302 clinical medicineravintoaineet030212 general & internal medicineGeneral Environmental ScienceTrophic levelchemistry.chemical_classificationvesistötbiologyrehevöityminenplanktonTemperaturelaatuEutrophicationEicosapentaenoic acidclimate changelämpötilahenkiinjääminenPlasticsDaphnia magnafood qualityCyanobacteriafatty acidsZooplanktonravinto03 medical and health sciencesAnimal scienceAnimalsHumans0105 earth and related environmental sciencessterolitfungiInfant NewbornFatty acidilmastonmuutoksetbiology.organism_classificationmikroroskatDaphniachemistryvesikirputFood qualityEnvironmental Research
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The Diapause Lipidomes of Three Closely Related Beetle Species Reveal Mechanisms for Tolerating Energetic and Cold Stress in High-Latitude Seasonal E…

2020

During winter insects face energetic stress driven by lack of food, and thermal stress due to sub-optimal and even lethal temperatures. To survive, most insects living in seasonal environments such as high latitudes, enter diapause, a deep resting stage characterized by a cessation of development, metabolic suppression and increased stress tolerance. The current study explores physiological adaptations related to diapause in three beetle species at high latitudes in Europe. From an ecological perspective, the comparison is interesting since one species (Leptinotarsa decemlineata) is an invasive pest that has recently expanded its range into northern Europe, where a retardation in range expa…

DECEMLINEATA SAY COLEOPTERAabiotic stressPhysiologyLEPTINOTARSA-DECEMLINEATAlehtikuoriaisetRANGE EXPANSIONlipiditekofysiologiaECOPHYSIOLOGICAL PHASEStalvehtimineninvasive specieskylmänkestävyystuhohyönteisetvieraslajitrange expansionlepotilaOriginal ResearchMEMBRANE-LIPIDSkoloradonkuoriainen1184 Genetics developmental biology physiologyBIOLOGICAL-MEMBRANESHOMEOVISCOUS ADAPTATIONclimate changeMETABOLIC-RATEpest insecthyönteisetCOLORADO POTATO BEETLEleviäminenDISCONTINUOUS GAS-EXCHANGE
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