Search results for "long-range"
showing 10 items of 54 documents
Computational Prediction of Position Effects of Apparently Balanced Human Chromosomal Rearrangements.
2017
Interpretation of variants of uncertain significance, especially chromosomal rearrangements in non-coding regions of the human genome, remains one of the biggest challenges in modern molecular diagnosis. To improve our understanding and interpretation of such variants, we used high-resolution three-dimensional chromosomal structural data and transcriptional regulatory information to predict position effects and their association with pathogenic phenotypes in 17 subjects with apparently balanced chromosomal abnormalities. We found that the rearrangements predict disruption of long-range chromatin interactions between several enhancers and genes whose annotated clinical features are strongly …
HCN2 Channel-Induced Rescue of Brain Teratogenesis via Local and Long-Range Bioelectric Repair
2020
Embryonic exposure to the teratogen nicotine results in brain defects, by disrupting endogenous spatial pre patterns necessary for normal brain size and patterning. Extending prior work in Xenopus laevis that showed that misexpression of ion channels can rescue morphogenesis, we demonstrate and characterize a novel aspect of developmental bioelectricity: channel-dependent repair signals propagate long-range across the embryo. We show that distal HCN2 channel misexpression and distal transplants of HCN2-expressing tissue, non-cell-autonomously reverse profound defects, rescuing brain anatomy, gene expression, and learning. Moreover, such rescue can be induced by small-molecule HCN2 channel a…
Multiplicity dependence of the average transverse momentum in pp, p–Pb, and Pb–Pb collisions at the LHC
2013
The average transverse momentum $\langle p_{\rm T}\rangle$ versus the charged-particle multiplicity $N_{\rm ch}$ was measured in p-Pb collisions at a collision energy per nucleon-nucleon pair $\sqrt{s_{\rm NN}}=5.02$ TeV and in pp collisions at collision energies of $\sqrt{s}=0.9$, 2.76, and 7 TeV in the kinematic range $0.15<p_{\rm T}<10.0$ GeV/$c$ and $|\eta|<0.3$ with the ALICE apparatus at the LHC. These data are compared to results in Pb-Pb collisions at $\sqrt{s_{\rm NN}}=2.76$ TeV at similar charged-particle multiplicities. In pp and p-Pb collisions, a strong increase of $\langle p_{\rm T}\rangle$ with $N_{\rm ch}$ is observed, which is much stronger than that measured in Pb-Pb colli…
Multi-model ensemble simulations of olive pollen distribution in Europe in 2014: current status and outlook
2017
"Çalışmada 29 yazar bulunmaktadır. Bu yazarlardan sadece Bursa Uludağ Üniversitesi mensuplarının girişleri yapılmıştır” The paper presents the first modelling experiment of the European-scale olive pollen dispersion, analyses the quality of the predictions, and outlines the research needs. A 6-model strong ensemble of Copernicus Atmospheric Monitoring Service (CAMS) was run throughout the olive season of 2014, computing the olive pollen distribution. The simulations have been compared with observations in eight countries, which are members of the European Aeroallergen Network (EAN). Analysis was performed for individual models, the ensemble mean and median, and for a dynamically optimised c…
Variational Aspects of the Physically-Based Approach to 3D Non-Local Continuum Mechanics
2010
This paper deals with the generalization to three-dimensional elasticity of the physically-based approach to non-local mechanics, recently proposed by the authors in one-dimensional case. The proposed model assumes that the equilibrium of a volume element is attained by contact forces between adjacent elements and by long-range central forces exerted by non-adjacent elements. Specifically, the long-range forces are modeled as central body forces depending on the relative displacements between the centroids of the volume elements, measured along the line connecting the centroids. Furthermore, the long-range forces are assumed to be proportional to a proper, material-dependent, distance-decay…
Physically-Based Approach to the Mechanics of Strong Non-Local Linear Elasticity Theory
2009
In this paper the physically-based approach to non-local elasticity theory is introduced. It is formulated by reverting the continuum to an ensemble of interacting volume elements. Interactions between adjacent elements are classical contact forces while long-range interactions between non-adjacent elements are modelled as distance-decaying central body forces. The latter are proportional to the relative displacements rather than to the strain field as in the Eringen model and subsequent developments. At the limit the displacement field is found to be governed by an integro-differential equation, solved by a simple discretization procedure suggested by the underlying mechanical model itself…
A generalized model of elastic foundation based on long-range interactions: Integral and fractional model
2009
The common models of elastic foundations are provided by supposing that they are composed by elastic columns with some interactions between them, such as contact forces that yield a differential equation involving gradients of the displacement field. In this paper, a new model of elastic foundation is proposed introducing into the constitutive equation of the foundation body forces depending on the relative vertical displacements and on a distance-decaying function ruling the amount of interactions. Different choices of the distance-decaying function correspond to different kind of interactions and foundation behavior. The use of an exponential distance-decaying function yields an integro-d…
Long-range interactions in 1D heterogeneous solids with uncertainty
2013
Abstract In this paper, the authors aim to analyze the response of a one-dimensional non-local elastic solid with uncertain Young's modulus. The non-local effects are represented as long-range central body forces between non-adjacent volume elements. Following a non-probabilistic approach, the fluctuating elastic modulus of the material is modeled as an interval field. The analysis is conducted resorting to a novel formulation that confines the overestimation effect involved in interval models. Approximate closed-form expressions are derived for the bounds of the interval displacement field.
The mechanically-based approach to 3D non-local linear elasticity theory: Long-range central interactions
2010
Abstract This paper presents the generalization to a three-dimensional (3D) case of a mechanically-based approach to non-local elasticity theory, recently proposed by the authors in a one-dimensional (1D) case. The proposed model assumes that the equilibrium of a volume element is attained by contact forces between adjacent elements and by long-range forces exerted by non-adjacent elements. Specifically, the long-range forces are modelled as central body forces depending on the relative displacement between the centroids of the volume elements, measured along the line connecting the centroids. Further, the long-range forces are assumed to be proportional to a proper, material-dependent, dis…
Mechanically-based approach to non-local elasticity: Variational principles
2010
Abstract The mechanically-based approach to non-local elastic continuum, will be captured through variational calculus, based on the assumptions that non-adjacent elements of the solid may exchange central body forces, monotonically decreasing with their interdistance, depending on the relative displacement, and on the volume products. Such a mechanical model is investigated introducing primarily the dual state variables by means of the virtual work principle. The constitutive relations between dual variables are introduced defining a proper, convex, potential energy. It is proved that the solution of the elastic problem corresponds to a global minimum of the potential energy functional. Mo…