Search results for "macrocyclic compound"

showing 10 items of 46 documents

In vitro leishmanicidal activity of pyrazole-containing polyamine macrocycles which inhibit the Fe-SOD enzyme of Leishmania infantum and Leishmania b…

2014

The in vitro leishmanicidal activity and cytotoxicity of pyrazole-containing macrocyclic polyamines 1-4 was assayed on Leishmania infantum and Leishmania braziliensis species. Compounds 1-4 were more active and less toxic than glucantime and both infection rates and ultrastructural alterations confirmed that 1 and 2 were highly leishmanicidal and induced extensive parasite cell damage. Modifications in the excretion products of parasites treated with 1-3 were also consistent with substantial cytoplasm alterations. Compound 2 was highlighted as a potent inhibitor of Fe-SOD in both species, whereas its effect on human CuZn-SOD was poor. Molecular modelling suggested that 2 could deactivate Fe…

Models MolecularLeishmanicidal activityErythrocytesMacrocyclic CompoundsAntioxidantCell Survivalmedicine.medical_treatmentAntiprotozoal AgentsProtozoan ProteinsBiologyLeishmania braziliensisCell LinePolyamine macrocyclechemistry.chemical_compoundMicroscopy Electron TransmissionIron superoxide dismutasePolyaminesmedicineAnimalsHumansLeishmania infantumCytotoxicityLeishmaniasischemistry.chemical_classificationMice Inbred BALB CSuperoxide DismutaseMacrophagesbiology.organism_classificationLeishmania braziliensisIn vitroInfectious DiseasesEnzymechemistryBiochemistryCell culturePyrazolePyrazolesFemaleAnimal Science and ZoologyParasitologyLeishmania infantumPolyamineParasitology
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N-doped carbon networks: alternative materials tracing new routes for activating molecular hydrogen.

2014

The fragmentation of molecular hydrogen on N-doped carbon networks was investigated by using molecular (polyaromatic macrocycles) as well as truncated and periodic (carbon nanotubes) models. The computational study was focused on the ergonicity analysis of the reaction and on the properties of the transition states involved when constellations of three or four pyridinic nitrogen atom defects are present in the carbon network. Calculations show that whenever N-defects are embedded in species characterized by large conjugated π-systems, either in polyaromatic macrocycles or carbon nanotubes, the corresponding H2 bond cleavage is largely exergonic. The fragmentation Gibbs free energy is affect…

Models MolecularMacrocyclic CompoundsHydrogenNitrogenchemistry.chemical_elementCarbon nanotubeConjugated systemCatalysislaw.inventionsymbols.namesakeFragmentation (mass spectrometry)lawCarbon networkDopingOrganic chemistryBond cleavageExergonic reactionChemistryNanotubes CarbonOrganic ChemistryChemistry (all)General ChemistryTransition stateCarbonGibbs free energyNanotubeMacrocycleChemical physicssymbolsDensity functional calculationHydrogenChemistry (Weinheim an der Bergstrasse, Germany)
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Imidazolate bridged Cu(II)-Cu(II) and Cu(II)-Zn(II) complexes of a terpyridinophane azamacrocycle: a solution and solid state study.

2007

The dinuclear Cu2+ and Zn2+ as well as the mixed Cu2+-Zn2+ complexes of a 5,5''-pentaazaterpyridinophane ligand (L) are able to incorporate imidazolate (Im-) as a bridging ligand. The crystal structure of [Cu(2)L(Im)(Br)(H2O)](CF(3)SO(3))(2).3H2O (1) shows one copper coordinated by the three pyridine nitrogens of the terpyridine unit, one nitrogen of the imidazolate bridge (Im-) and one bromide anion occupying the axial position of a distorted square pyramid. The second copper atom is coordinated by the remaining imidazolate nitrogen, the three secondary nitrogens at the centre of the polyamine bridge and one water molecule that occupies the axial position. Magnetic measurements have been p…

Models MolecularMacrocyclic CompoundsMagnetic Resonance SpectroscopyPyridinesInorganic chemistrychemistry.chemical_elementCrystal structureCrystallography X-RayLigandsInorganic Chemistrychemistry.chemical_compoundMagneticsImidazolateElectrochemistryOrganometallic CompoundsImidazoleAza CompoundsMolecular StructureChemistryLigandSuperoxide DismutaseImidazolesTemperatureBridging ligandHydrogen-Ion ConcentrationCopperEnzyme ActivationSolutionsCrystallographyZincStability constants of complexesTerpyridineCopperDalton transactions (Cambridge, England : 2003)
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Aryl-bis-(scorpiand)-aza receptors differentiate between nucleotide monophosphates by a combination of aromatic, hydrogen bond and electrostatic inte…

2014

Bis-polyaza pyridinophane scorpiands bind nucleotides in aqueous medium with 10–100 micromolar affinity, predominantly by electrostatic interactions between nucleotide phosphates and protonated aliphatic amines and assisted by aromatic stacking interactions. The pyridine-scorpiand receptor showed rare selectivity toward CMP with respect to other nucleotides, whereby two orders of magnitude affinity difference between CMP and UMP was the most appealing. The phenanthroline-scorpiand receptor revealed at pH 5 strong selectivity toward AMP with respect to other NMPs, based on the protonation of adenine heterocyclic N1. The results stress that the efficient recognition of small biomolecules with…

Models MolecularMacrocyclic CompoundsMagnetic Resonance Spectroscopyscorpiand receptor; nucleotide recognition; NMR; fluorescenceStereochemistryStatic ElectricityStackingProtonation010402 general chemistry01 natural sciencesBiochemistryPhosphateschemistry.chemical_compoundMoietyNucleotidePhysical and Theoretical Chemistrychemistry.chemical_classificationAza CompoundsMolecular Structure010405 organic chemistryHydrogen bondChemistryNucleotidesPhysicsArylBiomoleculeOrganic ChemistryHydrogen BondingHydrogen-Ion Concentration0104 chemical sciencesChemistrySelectivityOrganicbiomolecular chemistry
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Cyclic [2]Pseudorotaxane Tetramers Consisting of Two Rigid Rods Threaded through Two Bis-Macrocycles: Copper(I)-Templated Synthesis and X-ray Structu…

2008

Variously substituted coordinating rigid rods have been synthesized which incorporate a central 4,7-phenanthroline nucleus attached to two 2-pyridyl groups via its 3 and 8 positions, so as to yield bis-bidentate chelates, the two-coordinating axes of the chelates being parallel to one another. Regardless of the nature of the substituents borne by the rods, the copper(I)-induced threading reaction of two such rods through the rings of two bis-macrocycles affords in a quantitative yield the 4-copper(I) threaded assembly. The [2]pseudorotaxane tetramers thus obtained have been fully characterized in solution and, for one of them, an X-ray structure could be obtained, confirming the threaded na…

Models MolecularMacrocyclic CompoundsMolecular StructureRotaxanesChemistryX-raychemistry.chemical_elementStereoisomerismStereoisomerismGeneral ChemistryCrystallography X-RayBiochemistryCopperCatalysisRodCrystallographyColloid and Surface ChemistryYield (chemistry)Organometallic CompoundsThreading (manufacturing)MoleculeCopperPhenanthrolinesGroup 2 organometallic chemistryJournal of the American Chemical Society
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A surprising switch in absolute configuration of anti-inflammatory macrolactones.

2016

Oxacyclododecindione-type macrolactones exhibit highly potent anti-inflammatory activities even at nanomolar concentration. After the determination of the relative configuration of the stereocenters at C14 and C15 by total synthesis of 4-dechloro-14-deoxyoxacyclododecindione and 14-deoxyoxacyclododecindione, the absolute configuration has now been assigned by X-ray crystallography. Surprisingly, the absolute configuration is (14S,15R) which differs for C15 from that of the well-known derivatives of (S)-curvularin. The biological activities of both enantiomers of 14-deoxyoxacyclododecindione, obtained by racemic synthesis and optical resolution, were investigated and the ring conformation of…

Models MolecularMacrocyclic CompoundsStereochemistryAnti-Inflammatory AgentsMolecular ConformationStereoisomerism010402 general chemistryRing (chemistry)Crystallography X-Ray01 natural sciencesBiochemistryStereocenterchemistry.chemical_compoundHumansPhysical and Theoretical ChemistryNatural product010405 organic chemistryChemistryOrganic ChemistryAbsolute configurationTotal synthesisStereoisomerismCurvularinHep G2 Cells0104 chemical sciencesEnantiomerOrganicbiomolecular chemistry
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Remarkable Inertness of Copper(II) Chelates of Cyclen-Based Macrobicycles with Two trans-N-Acetate Arms

2013

Two cross-bridged cyclen-based macrocycles with two trans-N-acetic acid arms, one having a dibenzofuran (DBF) moiety as the bridge, H2L1, and the other a diphenyl ether (DPE) one, H2L2, were synthesized. Both compounds behave as "proton sponges." The thermodynamic stability constants for the Cu(2+), Zn(2+), Al(3+), and Ga(3+) complexes of both compounds were determined. They exhibit an excellent thermodynamic selectivity for copper(II), ensuring that metal ions largely present in the human body do not interfere with the copper(II) chelates. All complexes are very slow to form, and [CuL2] and [CuL1] are extremely inert to demetallate, especially [CuL2]. The acid-assisted dissociation of [CuL…

Models MolecularMacrocyclic CompoundsStereochemistrychemistry.chemical_elementAcetatesCrystallography X-RayCyclamsInorganic Chemistrychemistry.chemical_compoundCyclenCoordination ComplexesHeterocyclic CompoundsPolymer chemistryMoietyChelationPhysical and Theoretical ChemistryBenzofuransChelating AgentsChemistryPhenyl EthersSpectrum AnalysisDiphenyl etherCopperDibenzofuranThermodynamicsCopperInorganic Chemistry
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Molecular Rearrangement of an Aza-Scorpiand Macrocycle Induced by pH: A Computational Study †

2016

Rearrangements and their control are a hot topic in supramolecular chemistry due to the possibilities that these phenomena open in the design of synthetic receptors and molecular machines. Macrocycle aza-scorpiands constitute an interesting system that can reorganize their spatial structure depending on pH variations or the presence of metal cations. In this study, the relative stabilities of these conformations were predicted computationally by semi-empirical and density functional theory approximations, and the reorganization from closed to open conformations was simulated by using the Monte Carlo multiple minimum method Financial support by the Spanish Ministerio de Economía y Competitiv…

Models MolecularMontecarlo Mètode deMonte Carlo method01 natural sciencessupramolecular chemistryMonte Carlo Multiple Minimumlcsh:ChemistryComputational chemistryaza-scorpiandsMolecular rearrangementpH controlled; supramolecular chemistry; synthetic receptors; aza-scorpiands; semi-empirical; Density Functional Theory; Monte Carlo Multiple Minimumlcsh:QH301-705.5semi-empiricalSpectroscopyDensity Functional TheoryDensity functionalsSpatial structureChemistryGeneral MedicineHydrogen-Ion ConcentrationMolecular machineComputer Science ApplicationsMonte Carlo methodpH controlledvisual_artsynthetic receptorsvisual_art.visual_art_mediumDensity functional theoryMonte Carlo MethodMacrocyclic CompoundsSupramolecular chemistry010402 general chemistryQuímica supramolecularCatalysisArticleInorganic ChemistryMetalQuantitative Biology::Subcellular ProcessesPhysical and Theoretical ChemistryMolecular BiologyAza CompoundsFuncional de densitat Teoria del010405 organic chemistryOrganic ChemistryComputational Biology0104 chemical scienceslcsh:Biology (General)lcsh:QD1-999Synthetic ReceptorsQuantum TheorySupramolecular chemistryInternational Journal of Molecular Sciences
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Supramolecular complexation for environmental control

2012

Supramolecular complexes offer a new and efficient way for the monitoring and removal of many substances emanating from technical processes, fertilization, plant and animal protection, or e.g. chemotherapy. Such pollutants range from toxic or radioactive metal ions and anions to chemical side products, herbicides, pesticides to drugs including steroids, and include degradation products from natural sources. The applications involve usually fast and reversible complex formation, due to prevailing non-covalent interactions. This is of importance for sensing as well as for separation techniques, where the often expensive host compounds can then be reused almost indefinitely. Immobilization of …

Models MolecularPollutantMacrocyclic CompoundsOrganic chemicalsChemistryComplex formationSupramolecular chemistryNew materialsNanotechnologyEquipment DesignGeneral ChemistryMetalsAnimalsHumansSeparation methodEnvironmental PollutantsOrganic ChemicalsEnvironmental Restoration and RemediationEnvironmental MonitoringChemical Society Reviews
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Macrocyclic oligoureas with xanthene and diphenyl ether units

2009

Two cyclic oligoureas with 64- and 80-membered rings in which two sets of three or four rigid xanthene (X) units are connected via flexible diphenyl ether (D) units were synthesized by a stepwise fragment condensation. The compounds were characterized by (1)H NMR and ESI mass spectrometry. The structure of the cyclic octamer (XXXDXXXD) was additionally confirmed by single crystal X-ray analysis. The molecule assumes a strongly folded conformation with distorted C(2)-symmetry, stabilized by intramolecular hydrogen bonds. Surprisingly, intermolecular hydrogen bonds between the macrocycles were not observed. (1)H NMR spectra suggest a C(2) symmetrical conformation of the octamer in solution al…

Models MolecularXantheneMacrocyclic CompoundsMagnetic Resonance SpectroscopyPolymersHydrogen bondChemistryStereochemistryPhenyl EthersOrganic ChemistryDiphenyl etherIntermolecular forceMolecular ConformationCrystallography X-RayBiochemistryCrystallographychemistry.chemical_compoundXanthenesIntramolecular forceProton NMRMoleculeHistone octamerPhysical and Theoretical ChemistryOrganic & Biomolecular Chemistry
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